| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is 124265455
Identifier: 124265455
GI number: 124265455
Start: 284787
End: 285494
Strand: Reverse
Name: 124265455
Synonym: Mpe_A0262
Alternate gene names: NA
Gene position: 285494-284787 (Counterclockwise)
Preceding gene: 124265456
Following gene: 124265451
Centisome position: 7.06
GC content: 74.72
Gene sequence:
>708_bases ATGCTGAGGGCACTGGTGCTGGTGCTGCTGCTGGCCAACGCGGGCTTCTGGGTCTGGCGGCAGGGCTGGCTCGCGCCGCT GCACGGCGCGATCGGCGCCCGCCCGGAAGGCGAGCGCGAGCCCGAACGCCTGGCGATGCAGGTCGATCCCGACCGCCTCC GCCTGATCCCGGCCGAAGCGGCCTCGACCCCTGCCGCCGTGGCAGCGAGCGCAGCGACCAGCCCCGCCTCTGCCCCGCCC AGCGCGCCCCCGATGGCCTGCCTCGAGGCGGGCCCCTACAGCACGGCGGAACTGACGGTCGCCGAGGCGGCCGTCAAGGC CGCGCTGCCGGACCTCGGCTGGTCCGAGCGCGAACTCACGACGACCTGGTGGGTCGCGATGGGCCCATTCGCCGAGGCCG AGCAGATGCAGAAGAAGCGCGACGAACTGAAGCGCCGCAGCATCGCCCCCGAACTGGCCAGCGCCGCGCCCGGCAGCGCG CCGCTGCTGGTGATCAGCCGCCACGACAGCCGCGCCGCTGCGGAGAGCGAACTGACGACGCTGCTGGACCGCGGCGTGCG CACCGCCCGCGTGGTCAATGCCAGCGTGCCGCTGCGCCTGCTGCGCGTGGCGCAGGCCAGTGAGGCGCAGCAGGCGGCGC TGGCCGCGCTGCCGGCCGACAAGTTGCGCGGCAAGGCATTCCTGCCCTGTCCGGCCGACACGCTCTGA
Upstream 100 bases:
>100_bases ACGGCGTGGCCGACGGGGTCGATGCCCGTGGGGCACTGCGTGTGCGGACCGAACGCGGCGAGGAGTGCCTGATCCGCAGC GGCGAAGTGAGCGTGCGACC
Downstream 100 bases:
>100_bases ACTGCGAGCGGAGAGCCCGCGCCGTCAAGCGTCGCGCCCTGCGCTCAGCCGCCAGGCAGCCCCCACGGCCAGCGCCAGTG CCAGCAGGTAGGCCGGGCCG
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLRALVLVLLLANAGFWVWRQGWLAPLHGAIGARPEGEREPERLAMQVDPDRLRLIPAEAASTPAAVAASAATSPASAPP SAPPMACLEAGPYSTAELTVAEAAVKAALPDLGWSERELTTTWWVAMGPFAEAEQMQKKRDELKRRSIAPELASAAPGSA PLLVISRHDSRAAAESELTTLLDRGVRTARVVNASVPLRLLRVAQASEAQQAALAALPADKLRGKAFLPCPADTL
Sequences:
>Translated_235_residues MLRALVLVLLLANAGFWVWRQGWLAPLHGAIGARPEGEREPERLAMQVDPDRLRLIPAEAASTPAAVAASAATSPASAPP SAPPMACLEAGPYSTAELTVAEAAVKAALPDLGWSERELTTTWWVAMGPFAEAEQMQKKRDELKRRSIAPELASAAPGSA PLLVISRHDSRAAAESELTTLLDRGVRTARVVNASVPLRLLRVAQASEAQQAALAALPADKLRGKAFLPCPADTL >Mature_235_residues MLRALVLVLLLANAGFWVWRQGWLAPLHGAIGARPEGEREPERLAMQVDPDRLRLIPAEAASTPAAVAASAATSPASAPP SAPPMACLEAGPYSTAELTVAEAAVKAALPDLGWSERELTTTWWVAMGPFAEAEQMQKKRDELKRRSIAPELASAAPGSA PLLVISRHDSRAAAESELTTLLDRGVRTARVVNASVPLRLLRVAQASEAQQAALAALPADKLRGKAFLPCPADTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24842; Mature: 24842
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRALVLVLLLANAGFWVWRQGWLAPLHGAIGARPEGEREPERLAMQVDPDRLRLIPAEA CHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHEEEEECCCCEEEEECCC ASTPAAVAASAATSPASAPPSAPPMACLEAGPYSTAELTVAEAAVKAALPDLGWSERELT CCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE TTWWVAMGPFAEAEQMQKKRDELKRRSIAPELASAAPGSAPLLVISRHDSRAAAESELTT EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH LLDRGVRTARVVNASVPLRLLRVAQASEAQQAALAALPADKLRGKAFLPCPADTL HHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCC >Mature Secondary Structure MLRALVLVLLLANAGFWVWRQGWLAPLHGAIGARPEGEREPERLAMQVDPDRLRLIPAEA CHHHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCCCCCCHHHEEEEECCCCEEEEECCC ASTPAAVAASAATSPASAPPSAPPMACLEAGPYSTAELTVAEAAVKAALPDLGWSERELT CCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCE TTWWVAMGPFAEAEQMQKKRDELKRRSIAPELASAAPGSAPLLVISRHDSRAAAESELTT EEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEECCCCHHHHHHHHHH LLDRGVRTARVVNASVPLRLLRVAQASEAQQAALAALPADKLRGKAFLPCPADTL HHHCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA