| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is maeB [H]
Identifier: 124265400
GI number: 124265400
Start: 222300
End: 224594
Strand: Reverse
Name: maeB [H]
Synonym: Mpe_A0207
Alternate gene names: 124265400
Gene position: 224594-222300 (Counterclockwise)
Preceding gene: 124265407
Following gene: 124265399
Centisome position: 5.55
GC content: 67.58
Gene sequence:
>2295_bases ATGCTGACCAACGAAGAAAAGAGTGCGGAACTGCGCCAGGCCGCGCTCGAGTACCACGAGTTCCCGACGCCCGGCAAGGT GGCCATCGCCGCCACCAAGCAGCTGGTCAATCAGCGCGACCTCGCGCTGGCGTATTCGCCCGGCGTGGCGGCCGCCTGCG AAGAGATCGTGGCCGACCCGGCCAACGCCTACCGCTACACCTCGCGCGGCAACCTCGTGGCGGTGGTCACCAACGGCACT GCGGTGCTGGGCCTGGGGGACATCGGTCCGCTGGCGGCCAAGCCGGTGATGGAAGGCAAGGGCGTGCTGTTCAAGAAGTT CGCCGGCATCGACGTGTTCGACCTCGAGATCGCCGAGCGCAACCTCGACAAGCTGGTCGACTGCATCGCCGCGCTGGAAC CCACCTTCGGCGGCATCAACCTCGAGGACATCAAGGCGCCGGACTGCTTCTACGTGGAGCGCAAGCTGCGCGAACGCATG AAGATCCCGGTCTTCCACGACGACCAGCACGGCACGGCGATCGTGGTCGGTGCCGCGCTGATCAATGGCCTGAAGGTGGT CGGCAAGGACATCACCAAGGTCAAGCTGGTCACGTCGGGCGCCGGTGCGGCTGCGCTGGCCTGCCTGAACCTGCTGGTGA AGCTGGGGCTGCCGCGCGAGAACATCTGGGTCACCGATCTGGCCGGCGTGGTCTACAGCGGACGCACCGAGCTGATGGAC CCCGACAAGGCCGAGTTTGCCCAGCCCACCAGCCAGCGCTCGCTGATGGACGCGATCGCTGGTGCCGACATCTTCCTGGG CCTGTCAGCCGGCGGCGTGCTGAAGAAGGACATGGTCGCGAAGATGGCGGCCAATCCGGTGATCTTCGCACTGGCCAACC CCAACCCCGAGATTTCACCGGAGGACGTGAAGGCGGTGCGTGACGACGCCATCATGGCCACCGGCCGCACCGACTACCCG AACCAGGTCAACAACGTCCTGTGCTTCCCCTACATCTTCCGGGGCGCGCTGGACTCGGGGGCGACCACCATCACCGACGA GATGGAAGTCGCCGCGGTCTACGCGATCGCCGACCTGGCCCAGGCCGAGCAGAGCGAGGTGGTGGCCGCCGCCTACGCCG GCGCCACGCTGAGCTTCGGGCCGGAGTACCTGATCCCCAAGCCCTTCGACCCGCGCCTGATGATGAAGATCGCGCCGGCC GTCGCGCTGGCGGCAGCGGCCTCGGGCGTGGCCACGAGGCCCGTCAAGGACATCGACGCCTACCGCGAGAAGCTGCAGGC CTTCGTCTACGCCTCGGGCACGACGATGAAGCCGATCTTCAACGTCGCCAAGCGCGCCAAGGTCAAGCGCGTGGTGTTCT GCGAGGGCGAGGAAGAGCGCGTGCTGCGCGCGGTGCAGGTCATCATCGACGAGGACCTGGCGCGGCCGACGCTGGTGGGC CGCCCACCGGTCATCGAGCAGCGCTGCGAGCGCTTCGGGCTGCGGCTGCAAGCCGGTCGCGACTATGACGTGGTCAACCC CGAGAACGACGAACGCTACCGCGACTACTGGCAGACCTACCACCGCATCATGGCGCGGCGCGGCGTGACCCAGCAGTTCG CGAAGATCGAGATGCGGCGCCGGCTGACACTGATCGGCGGCATGCTGCTGCACAAGGGCGAGGTCGACGGCATGCTCTGC GGCACCTGGGGCACGACAGCGATGCACCTCAAGCACATCGACGAGCTGATCGGCCTGCGCCCTGGCGCCAAGACCTACGC CTGCATGAACGGGCTGATCCTGCCCGGCCGCCAGGTGATGCTGGTCGACACCCACGTCAACTACGACCCCACCGCGGCCC AGCTGGCCGAGATCACGGTGATGGCGGCCGAGGAGATGAAGCGCTTCGGCCTGGTGCCCAAGGCGGCGCTGCTGAGCCAC TCCAACTTCGGCTCCAGCAACCAGCCTTCGGCGCTGAAGATGCGCGAGGCGCTCGCGCTGGTGCGCGCGCAGGCGCCGTG GCTGGAGGTCGACGGCGAGATGCACGGCGACACGGCACTCGATCCCTCGCAACGCAGTGCCCAGATCCCCGACAGCACAC TGCAGGGAGAAGCGAACCTGCTGGTGTTGCCGAACATCGACGCCGCCAACATCTCGTACAACCTGCTCAAGACTGCAGCC GGTGGCGGCATTGCGATCGGCCCGGTGCTGCTCGGCGCCGCCAAGCCGGTGCACATCCTGACGCCGTCCGCCACGGTGCG GCGCATCGTGAACCTGACGGCGCTGACGGTCGCCGACATCAACGCCGTCCGCTGA
Upstream 100 bases:
>100_bases TGCGCAAGCCGCTCTGGCCGCAAAAGGGGGTCTTCTTACAATCGTCGACCCGGCCCGCTGCCCCTCGTGCGGTGCGCCTC CCAACACGGAAAGCCAGACC
Downstream 100 bases:
>100_bases GCGCCGTCGACCCTTGCGCCGCCCTCCCCGGACCCACGGCGGCGGGCACCCCACAAGTCAGCGGCGAGAAAGTCGTCAAG TTTTCCGATATTCAAGACCA
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 764; Mature: 764
Protein sequence:
>764_residues MLTNEEKSAELRQAALEYHEFPTPGKVAIAATKQLVNQRDLALAYSPGVAAACEEIVADPANAYRYTSRGNLVAVVTNGT AVLGLGDIGPLAAKPVMEGKGVLFKKFAGIDVFDLEIAERNLDKLVDCIAALEPTFGGINLEDIKAPDCFYVERKLRERM KIPVFHDDQHGTAIVVGAALINGLKVVGKDITKVKLVTSGAGAAALACLNLLVKLGLPRENIWVTDLAGVVYSGRTELMD PDKAEFAQPTSQRSLMDAIAGADIFLGLSAGGVLKKDMVAKMAANPVIFALANPNPEISPEDVKAVRDDAIMATGRTDYP NQVNNVLCFPYIFRGALDSGATTITDEMEVAAVYAIADLAQAEQSEVVAAAYAGATLSFGPEYLIPKPFDPRLMMKIAPA VALAAAASGVATRPVKDIDAYREKLQAFVYASGTTMKPIFNVAKRAKVKRVVFCEGEEERVLRAVQVIIDEDLARPTLVG RPPVIEQRCERFGLRLQAGRDYDVVNPENDERYRDYWQTYHRIMARRGVTQQFAKIEMRRRLTLIGGMLLHKGEVDGMLC GTWGTTAMHLKHIDELIGLRPGAKTYACMNGLILPGRQVMLVDTHVNYDPTAAQLAEITVMAAEEMKRFGLVPKAALLSH SNFGSSNQPSALKMREALALVRAQAPWLEVDGEMHGDTALDPSQRSAQIPDSTLQGEANLLVLPNIDAANISYNLLKTAA GGGIAIGPVLLGAAKPVHILTPSATVRRIVNLTALTVADINAVR
Sequences:
>Translated_764_residues MLTNEEKSAELRQAALEYHEFPTPGKVAIAATKQLVNQRDLALAYSPGVAAACEEIVADPANAYRYTSRGNLVAVVTNGT AVLGLGDIGPLAAKPVMEGKGVLFKKFAGIDVFDLEIAERNLDKLVDCIAALEPTFGGINLEDIKAPDCFYVERKLRERM KIPVFHDDQHGTAIVVGAALINGLKVVGKDITKVKLVTSGAGAAALACLNLLVKLGLPRENIWVTDLAGVVYSGRTELMD PDKAEFAQPTSQRSLMDAIAGADIFLGLSAGGVLKKDMVAKMAANPVIFALANPNPEISPEDVKAVRDDAIMATGRTDYP NQVNNVLCFPYIFRGALDSGATTITDEMEVAAVYAIADLAQAEQSEVVAAAYAGATLSFGPEYLIPKPFDPRLMMKIAPA VALAAAASGVATRPVKDIDAYREKLQAFVYASGTTMKPIFNVAKRAKVKRVVFCEGEEERVLRAVQVIIDEDLARPTLVG RPPVIEQRCERFGLRLQAGRDYDVVNPENDERYRDYWQTYHRIMARRGVTQQFAKIEMRRRLTLIGGMLLHKGEVDGMLC GTWGTTAMHLKHIDELIGLRPGAKTYACMNGLILPGRQVMLVDTHVNYDPTAAQLAEITVMAAEEMKRFGLVPKAALLSH SNFGSSNQPSALKMREALALVRAQAPWLEVDGEMHGDTALDPSQRSAQIPDSTLQGEANLLVLPNIDAANISYNLLKTAA GGGIAIGPVLLGAAKPVHILTPSATVRRIVNLTALTVADINAVR >Mature_764_residues MLTNEEKSAELRQAALEYHEFPTPGKVAIAATKQLVNQRDLALAYSPGVAAACEEIVADPANAYRYTSRGNLVAVVTNGT AVLGLGDIGPLAAKPVMEGKGVLFKKFAGIDVFDLEIAERNLDKLVDCIAALEPTFGGINLEDIKAPDCFYVERKLRERM KIPVFHDDQHGTAIVVGAALINGLKVVGKDITKVKLVTSGAGAAALACLNLLVKLGLPRENIWVTDLAGVVYSGRTELMD PDKAEFAQPTSQRSLMDAIAGADIFLGLSAGGVLKKDMVAKMAANPVIFALANPNPEISPEDVKAVRDDAIMATGRTDYP NQVNNVLCFPYIFRGALDSGATTITDEMEVAAVYAIADLAQAEQSEVVAAAYAGATLSFGPEYLIPKPFDPRLMMKIAPA VALAAAASGVATRPVKDIDAYREKLQAFVYASGTTMKPIFNVAKRAKVKRVVFCEGEEERVLRAVQVIIDEDLARPTLVG RPPVIEQRCERFGLRLQAGRDYDVVNPENDERYRDYWQTYHRIMARRGVTQQFAKIEMRRRLTLIGGMLLHKGEVDGMLC GTWGTTAMHLKHIDELIGLRPGAKTYACMNGLILPGRQVMLVDTHVNYDPTAAQLAEITVMAAEEMKRFGLVPKAALLSH SNFGSSNQPSALKMREALALVRAQAPWLEVDGEMHGDTALDPSQRSAQIPDSTLQGEANLLVLPNIDAANISYNLLKTAA GGGIAIGPVLLGAAKPVHILTPSATVRRIVNLTALTVADINAVR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=396, Percent_Identity=26.7676767676768, Blast_Score=100, Evalue=9e-21, Organism=Homo sapiens, GI62420882, Length=341, Percent_Identity=26.3929618768328, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI62420880, Length=341, Percent_Identity=26.3929618768328, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI239049447, Length=341, Percent_Identity=26.3929618768328, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI4505145, Length=402, Percent_Identity=26.1194029850746, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI270265879, Length=368, Percent_Identity=27.1739130434783, Blast_Score=82, Evalue=3e-15, Organism=Escherichia coli, GI1788806, Length=751, Percent_Identity=60.7190412782956, Blast_Score=936, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=307, Percent_Identity=33.5504885993485, Blast_Score=150, Evalue=3e-37, Organism=Escherichia coli, GI1788635, Length=312, Percent_Identity=31.4102564102564, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI87081919, Length=408, Percent_Identity=24.7549019607843, Blast_Score=79, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17537199, Length=405, Percent_Identity=23.9506172839506, Blast_Score=68, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322823, Length=270, Percent_Identity=30.3703703703704, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI281362672, Length=403, Percent_Identity=27.5434243176179, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI281362674, Length=403, Percent_Identity=27.5434243176179, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356279, Length=403, Percent_Identity=27.5434243176179, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24646388, Length=403, Percent_Identity=26.5508684863524, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646386, Length=403, Percent_Identity=26.5508684863524, Blast_Score=81, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 82340; Mature: 82340
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNEEKSAELRQAALEYHEFPTPGKVAIAATKQLVNQRDLALAYSPGVAAACEEIVADP CCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC ANAYRYTSRGNLVAVVTNGTAVLGLGDIGPLAAKPVMEGKGVLFKKFAGIDVFDLEIAER CHHEEEECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCEEEEHHCCCEEEEHHHHHH NLDKLVDCIAALEPTFGGINLEDIKAPDCFYVERKLRERMKIPVFHDDQHGTAIVVGAAL HHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHH INGLKVVGKDITKVKLVTSGAGAAALACLNLLVKLGLPRENIWVTDLAGVVYSGRTELMD HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCC PDKAEFAQPTSQRSLMDAIAGADIFLGLSAGGVLKKDMVAKMAANPVIFALANPNPEISP CCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCH EDVKAVRDDAIMATGRTDYPNQVNNVLCFPYIFRGALDSGATTITDEMEVAAVYAIADLA HHHHHHHCCEEEECCCCCCCHHHCCEEEHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH QAEQSEVVAAAYAGATLSFGPEYLIPKPFDPRLMMKIAPAVALAAAASGVATRPVKDIDA HHHHHHEEEHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YREKLQAFVYASGTTMKPIFNVAKRAKVKRVVFCEGEEERVLRAVQVIIDEDLARPTLVG HHHHHHEEEEECCCCHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC RPPVIEQRCERFGLRLQAGRDYDVVNPENDERYRDYWQTYHRIMARRGVTQQFAKIEMRR CCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLTLIGGMLLHKGEVDGMLCGTWGTTAMHLKHIDELIGLRPGAKTYACMNGLILPGRQVM HHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCEEE LVDTHVNYDPTAAQLAEITVMAAEEMKRFGLVPKAALLSHSNFGSSNQPSALKMREALAL EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH VRAQAPWLEVDGEMHGDTALDPSQRSAQIPDSTLQGEANLLVLPNIDAANISYNLLKTAA HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCHHHHHHCC GGGIAIGPVLLGAAKPVHILTPSATVRRIVNLTALTVADINAVR CCCEEEHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCCCCC >Mature Secondary Structure MLTNEEKSAELRQAALEYHEFPTPGKVAIAATKQLVNQRDLALAYSPGVAAACEEIVADP CCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCC ANAYRYTSRGNLVAVVTNGTAVLGLGDIGPLAAKPVMEGKGVLFKKFAGIDVFDLEIAER CHHEEEECCCCEEEEEECCEEEEEECCCCCHHCCCCCCCCCEEEEHHCCCEEEEHHHHHH NLDKLVDCIAALEPTFGGINLEDIKAPDCFYVERKLRERMKIPVFHDDQHGTAIVVGAAL HHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHH INGLKVVGKDITKVKLVTSGAGAAALACLNLLVKLGLPRENIWVTDLAGVVYSGRTELMD HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCCCC PDKAEFAQPTSQRSLMDAIAGADIFLGLSAGGVLKKDMVAKMAANPVIFALANPNPEISP CCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCH EDVKAVRDDAIMATGRTDYPNQVNNVLCFPYIFRGALDSGATTITDEMEVAAVYAIADLA HHHHHHHCCEEEECCCCCCCHHHCCEEEHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHH QAEQSEVVAAAYAGATLSFGPEYLIPKPFDPRLMMKIAPAVALAAAASGVATRPVKDIDA HHHHHHEEEHHHCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH YREKLQAFVYASGTTMKPIFNVAKRAKVKRVVFCEGEEERVLRAVQVIIDEDLARPTLVG HHHHHHEEEEECCCCHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCC RPPVIEQRCERFGLRLQAGRDYDVVNPENDERYRDYWQTYHRIMARRGVTQQFAKIEMRR CCCHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RLTLIGGMLLHKGEVDGMLCGTWGTTAMHLKHIDELIGLRPGAKTYACMNGLILPGRQVM HHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCEECCCCEEE LVDTHVNYDPTAAQLAEITVMAAEEMKRFGLVPKAALLSHSNFGSSNQPSALKMREALAL EEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHH VRAQAPWLEVDGEMHGDTALDPSQRSAQIPDSTLQGEANLLVLPNIDAANISYNLLKTAA HHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCEEEECCCCCCCCCHHHHHHCC GGGIAIGPVLLGAAKPVHILTPSATVRRIVNLTALTVADINAVR CCCEEEHHHHHCCCCCEEEECCCHHHHHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]