| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is stp [H]
Identifier: 124265261
GI number: 124265261
Start: 62646
End: 63455
Strand: Reverse
Name: stp [H]
Synonym: Mpe_A0068
Alternate gene names: 124265261
Gene position: 63455-62646 (Counterclockwise)
Preceding gene: 124265262
Following gene: 124265260
Centisome position: 1.57
GC content: 68.02
Gene sequence:
>810_bases ATGCCCACGCTCCCGACCCCTCCTGCCTTGCGTTTCGAGTTCGTCAGTGCCACGGACACTGGCCGATCGCGCAACAACAA CGAAGACGCGGTGGTGATCGACGAGGCCGCAGGCCTGGCGGTCCTTGCCGACGGCATGGGCGGCTACAACGCCGGCGAGG TGGCCAGCAGCATGGCCACCAGCTTCATCAAGGCCGAGCTCGGCCGCTGGCTCAGCGAAGCCAGCGCCCAGGCCACCGAC ACCGACGTGCGGCGCGCCATGGACATCTGCGTCGACAACGCCAACCGCGCAATCTTCAACGCCGCCAACTCCAATCCGCA ATACGCCGGCATGGGCACGACGCTCGTGGTGGCCGTGCTGAGAGACGCGCGGCTGCTGCTCGGGCACATCGGCGATTCGC GTGGCTACCGCTGGCGCGAGGGCGAGCTGTCGCAGATCACCCGCGACCATTCCCTGTTGCAGGAGCAGCTCGATGCCGGC CTGATCACGCCCGAACAGGCGGCGGCCTCGAACAACAAGAACCTGGTCACCCGGGCGGTCGGTGTCGAGGACACCGTGCT GCTGGAGACGCACCTGCACCAGACCCAACCCGGCGACTGGATCCTGCTCTGCTCCGATGGGTTGTCGGACATGATCGACG ACGAGCAGATCGCTGCCGTGTTGCGCCAGCACGACTCTTTGCCGCAGGCCGCCCAGGCGCTGGTCCAGGCTGCCAACGAC GCGGGCGGACGGGATAACATCTCGGTCGTTCTGGTGCGCGCTTCGGGCACCGCGCCGGTGTCGCGGGCCTGGTGGCCGTT CCGCCGCTGA
Upstream 100 bases:
>100_bases CCGACGCACCGTCCGGCGGCGCCCGGCCGGCGCCCGACGCGCCAGAAGCCGGGCACAATCCTTAGTGTTCGCGCGCACTG GCGCGCTCAGCCGCTTTCCG
Downstream 100 bases:
>100_bases GGGGCGGCGTCCGGACATTCAGGCGCGCAGCAGGTCGCCGGGTTCCACTACATCAGAAGTCAGACGCACGGGGTCACGCA TGGGCAAGCTGGTCGTATCG
Product: serine/threonine specific protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MPTLPTPPALRFEFVSATDTGRSRNNNEDAVVIDEAAGLAVLADGMGGYNAGEVASSMATSFIKAELGRWLSEASAQATD TDVRRAMDICVDNANRAIFNAANSNPQYAGMGTTLVVAVLRDARLLLGHIGDSRGYRWREGELSQITRDHSLLQEQLDAG LITPEQAAASNNKNLVTRAVGVEDTVLLETHLHQTQPGDWILLCSDGLSDMIDDEQIAAVLRQHDSLPQAAQALVQAAND AGGRDNISVVLVRASGTAPVSRAWWPFRR
Sequences:
>Translated_269_residues MPTLPTPPALRFEFVSATDTGRSRNNNEDAVVIDEAAGLAVLADGMGGYNAGEVASSMATSFIKAELGRWLSEASAQATD TDVRRAMDICVDNANRAIFNAANSNPQYAGMGTTLVVAVLRDARLLLGHIGDSRGYRWREGELSQITRDHSLLQEQLDAG LITPEQAAASNNKNLVTRAVGVEDTVLLETHLHQTQPGDWILLCSDGLSDMIDDEQIAAVLRQHDSLPQAAQALVQAAND AGGRDNISVVLVRASGTAPVSRAWWPFRR >Mature_268_residues PTLPTPPALRFEFVSATDTGRSRNNNEDAVVIDEAAGLAVLADGMGGYNAGEVASSMATSFIKAELGRWLSEASAQATDT DVRRAMDICVDNANRAIFNAANSNPQYAGMGTTLVVAVLRDARLLLGHIGDSRGYRWREGELSQITRDHSLLQEQLDAGL ITPEQAAASNNKNLVTRAVGVEDTVLLETHLHQTQPGDWILLCSDGLSDMIDDEQIAAVLRQHDSLPQAAQALVQAANDA GGRDNISVVLVRASGTAPVSRAWWPFRR
Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]
COG id: COG0631
COG function: function code T; Serine/threonine protein phosphatase
Gene ontology:
Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015655 - InterPro: IPR001932 - InterPro: IPR014045 [H]
Pfam domain/function: PF00481 PP2C [H]
EC number: =3.1.3.16 [H]
Molecular weight: Translated: 28874; Mature: 28742
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLPTPPALRFEFVSATDTGRSRNNNEDAVVIDEAAGLAVLADGMGGYNAGEVASSMAT CCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHH SFIKAELGRWLSEASAQATDTDVRRAMDICVDNANRAIFNAANSNPQYAGMGTTLVVAVL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHH RDARLLLGHIGDSRGYRWREGELSQITRDHSLLQEQLDAGLITPEQAAASNNKNLVTRAV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEC GVEDTVLLETHLHQTQPGDWILLCSDGLSDMIDDEQIAAVLRQHDSLPQAAQALVQAAND CCCCEEEEEHHHCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHC AGGRDNISVVLVRASGTAPVSRAWWPFRR CCCCCCEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure PTLPTPPALRFEFVSATDTGRSRNNNEDAVVIDEAAGLAVLADGMGGYNAGEVASSMAT CCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHH SFIKAELGRWLSEASAQATDTDVRRAMDICVDNANRAIFNAANSNPQYAGMGTTLVVAVL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHH RDARLLLGHIGDSRGYRWREGELSQITRDHSLLQEQLDAGLITPEQAAASNNKNLVTRAV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEEEEC GVEDTVLLETHLHQTQPGDWILLCSDGLSDMIDDEQIAAVLRQHDSLPQAAQALVQAAND CCCCEEEEEHHHCCCCCCCEEEEECCCCHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHC AGGRDNISVVLVRASGTAPVSRAWWPFRR CCCCCCEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]