| Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
|---|---|
| Accession | NC_008825 |
| Length | 4,044,195 |
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The map label for this gene is 124265225
Identifier: 124265225
GI number: 124265225
Start: 32643
End: 34133
Strand: Reverse
Name: 124265225
Synonym: Mpe_A0032
Alternate gene names: NA
Gene position: 34133-32643 (Counterclockwise)
Preceding gene: 124265227
Following gene: 124265224
Centisome position: 0.84
GC content: 70.89
Gene sequence:
>1491_bases ATGCCCCTGGTCCCTCTCCTTCGCACACGGCTGCCCAGAACCTGGCCGTGCGTGATCGCCGCGCTCGGCCTCCTTCTCGC CGCGCCGTCCTTCGGCGCACCGGACACGCCGGGCGCGATCGGGACGGAACTGCGCGATCGCGCGAACGAACCGCCGGCGC CGGAACCTGCCGCCAGTGCCACCGCCACCCCCGACAAGAGCTACGTCATCCCGGCGCTGCAGATCATCGGCTTCGACTTT CTGCTGAACCGCTACAACCGGCGCTTCAGCGGCACGTCCGACTACGACGTCAGCCGCGCCTCCATACGCCGCAACCTGCG CGGGCCCTGGGTGGTCGACAACGACCCGTTCGACATCAACCAGTTCGCCCACCCCTACCAGGGCTCGCTGTACCACGGGG CCGCCCGCGCGAGCGGCCTGAGCTACTGGGAAGCGGCCGGCTACACCTTCGCCGGCAGCGTGGGCTGGGAGATCTTCGGC GAGCAGACGCCGCCGTCGTACAACGACCAGATCGCCAGCGGCATCGCCGGCAGCTTTCTCGGTGAGCCGCTGTTCCGCAT GGCGCACCTGGTGCTCAACGGCCCGGGCGGTCTGTCGCGCCCCTGGCGCGAGGCGATCGCTGCCGGCATCTCGCCCTCGC TGGGCTTCACGCGCCTCACCTTCGGCTCCCGCTTCGACGGCGCCTTCGTCGACAACGATCCGGTCTACTACAGCCGGCTG CGCCTCGGCGTCGCCCGCGCGGCGCAGGACAACCTGGGCACGTCGCGCGACCTGGAGCGCGACGAAGCGGTGATCGATTT CGCGCTCGACTACGGCCTGCCGGGCAAGGACGGCTACACCTACCGCCGCCCGTTCGACTACTTCAGTTTCCATGCCGCCG CCTCCACCGCCAACGGCGTGGAGACGCTGGCCACCCGCGGCCTGCTGTTCGGCACCGACTACGCGATCGGCGACACCGTC CGCGGCCTGTGGGGCCTGTACGGCAGCTACGACTACCTGGCACCGCAGATCTTCAACCTCTCGACCACCGCACTGTCGCT CGGCACGACCGGGCAGTGGTGGGCCTCCGAGCGGCTGGCGCTGCAGGGCACGGTGCTCGCCGGCCTGGGCTACTCGGCCG CCAGCACGCTGCGCCGCACCACCGAAGACCGCGACTACCACTACGGCGTGGCGCCGCGCCTGAGCCTCGCGCTGCGGCTG ATCGCCGGCGACCGCGCCTCGGTCGACCTGCAGGCGCAGAAGTATTTTCTCGGCAGCATCGCCAACCGCGCCGCCGGGCG CGACGACATCACCCGCGTCGACACCGCCTTCAACTGGCGCCTCCACAAGCGGCACGCCGTGGGCGTGAAGTACGTCTGGT CGCACCGCGACGCCAACTACCCGGGCGCCGGCGACCGCTCCCAGACGCTGGGCACGGTGGGGATCTACTACACGCTGCTC GGCGCCGATGGCTTCGGGGCGGTGGAGTGGCGGGAGCCGGCCGTGCACTGA
Upstream 100 bases:
>100_bases CCATGGCCGCGATTGTCGGCCGCCGCAGCGAGCGCCGTCCGACACGCGCCGGGCGCGTCGTCCGACAGACCGTGCGGCGG GCGTCGGAGAGCATGCGCCC
Downstream 100 bases:
>100_bases GGGCGGGTTCTCTCGGCTCGGGCGGTCTTCCGGAGCTCTTCGTGGCGGCGGTCGGTGCGGCAAAGGCGCGCCCGGACAGG CGGCGGTGCTTCGCCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MPLVPLLRTRLPRTWPCVIAALGLLLAAPSFGAPDTPGAIGTELRDRANEPPAPEPAASATATPDKSYVIPALQIIGFDF LLNRYNRRFSGTSDYDVSRASIRRNLRGPWVVDNDPFDINQFAHPYQGSLYHGAARASGLSYWEAAGYTFAGSVGWEIFG EQTPPSYNDQIASGIAGSFLGEPLFRMAHLVLNGPGGLSRPWREAIAAGISPSLGFTRLTFGSRFDGAFVDNDPVYYSRL RLGVARAAQDNLGTSRDLERDEAVIDFALDYGLPGKDGYTYRRPFDYFSFHAAASTANGVETLATRGLLFGTDYAIGDTV RGLWGLYGSYDYLAPQIFNLSTTALSLGTTGQWWASERLALQGTVLAGLGYSAASTLRRTTEDRDYHYGVAPRLSLALRL IAGDRASVDLQAQKYFLGSIANRAAGRDDITRVDTAFNWRLHKRHAVGVKYVWSHRDANYPGAGDRSQTLGTVGIYYTLL GADGFGAVEWREPAVH
Sequences:
>Translated_496_residues MPLVPLLRTRLPRTWPCVIAALGLLLAAPSFGAPDTPGAIGTELRDRANEPPAPEPAASATATPDKSYVIPALQIIGFDF LLNRYNRRFSGTSDYDVSRASIRRNLRGPWVVDNDPFDINQFAHPYQGSLYHGAARASGLSYWEAAGYTFAGSVGWEIFG EQTPPSYNDQIASGIAGSFLGEPLFRMAHLVLNGPGGLSRPWREAIAAGISPSLGFTRLTFGSRFDGAFVDNDPVYYSRL RLGVARAAQDNLGTSRDLERDEAVIDFALDYGLPGKDGYTYRRPFDYFSFHAAASTANGVETLATRGLLFGTDYAIGDTV RGLWGLYGSYDYLAPQIFNLSTTALSLGTTGQWWASERLALQGTVLAGLGYSAASTLRRTTEDRDYHYGVAPRLSLALRL IAGDRASVDLQAQKYFLGSIANRAAGRDDITRVDTAFNWRLHKRHAVGVKYVWSHRDANYPGAGDRSQTLGTVGIYYTLL GADGFGAVEWREPAVH >Mature_495_residues PLVPLLRTRLPRTWPCVIAALGLLLAAPSFGAPDTPGAIGTELRDRANEPPAPEPAASATATPDKSYVIPALQIIGFDFL LNRYNRRFSGTSDYDVSRASIRRNLRGPWVVDNDPFDINQFAHPYQGSLYHGAARASGLSYWEAAGYTFAGSVGWEIFGE QTPPSYNDQIASGIAGSFLGEPLFRMAHLVLNGPGGLSRPWREAIAAGISPSLGFTRLTFGSRFDGAFVDNDPVYYSRLR LGVARAAQDNLGTSRDLERDEAVIDFALDYGLPGKDGYTYRRPFDYFSFHAAASTANGVETLATRGLLFGTDYAIGDTVR GLWGLYGSYDYLAPQIFNLSTTALSLGTTGQWWASERLALQGTVLAGLGYSAASTLRRTTEDRDYHYGVAPRLSLALRLI AGDRASVDLQAQKYFLGSIANRAAGRDDITRVDTAFNWRLHKRHAVGVKYVWSHRDANYPGAGDRSQTLGTVGIYYTLLG ADGFGAVEWREPAVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54076; Mature: 53945
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00387 PPASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVPLLRTRLPRTWPCVIAALGLLLAAPSFGAPDTPGAIGTELRDRANEPPAPEPAASA CCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC TATPDKSYVIPALQIIGFDFLLNRYNRRFSGTSDYDVSRASIRRNLRGPWVVDNDPFDIN CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCHH QFAHPYQGSLYHGAARASGLSYWEAAGYTFAGSVGWEIFGEQTPPSYNDQIASGIAGSFL HHCCCCCCCEECCHHHHCCCCHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHH GEPLFRMAHLVLNGPGGLSRPWREAIAAGISPSLGFTRLTFGSRFDGAFVDNDPVYYSRL HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCHHHHHH RLGVARAAQDNLGTSRDLERDEAVIDFALDYGLPGKDGYTYRRPFDYFSFHAAASTANGV HHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH ETLATRGLLFGTDYAIGDTVRGLWGLYGSYDYLAPQIFNLSTTALSLGTTGQWWASERLA HHHHHCCEEEECCCCHHHHHHHHHHHHCCCHHHCCHHCCCCHHEEECCCCCCCCCCCCEE LQGTVLAGLGYSAASTLRRTTEDRDYHYGVAPRLSLALRLIAGDRASVDLQAQKYFLGSI EEEEEEECCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHEECCCCCEEHHHHHHHHHHH ANRAAGRDDITRVDTAFNWRLHKRHAVGVKYVWSHRDANYPGAGDRSQTLGTVGIYYTLL HHHCCCCCCHHHHHHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEE GADGFGAVEWREPAVH CCCCCCCCCCCCCCCC >Mature Secondary Structure PLVPLLRTRLPRTWPCVIAALGLLLAAPSFGAPDTPGAIGTELRDRANEPPAPEPAASA CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC TATPDKSYVIPALQIIGFDFLLNRYNRRFSGTSDYDVSRASIRRNLRGPWVVDNDPFDIN CCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCHH QFAHPYQGSLYHGAARASGLSYWEAAGYTFAGSVGWEIFGEQTPPSYNDQIASGIAGSFL HHCCCCCCCEECCHHHHCCCCHHHHCCEEEECCCCCEECCCCCCCCCCHHHHHHHHHHHH GEPLFRMAHLVLNGPGGLSRPWREAIAAGISPSLGFTRLTFGSRFDGAFVDNDPVYYSRL HHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCEECCCCHHHHHH RLGVARAAQDNLGTSRDLERDEAVIDFALDYGLPGKDGYTYRRPFDYFSFHAAASTANGV HHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH ETLATRGLLFGTDYAIGDTVRGLWGLYGSYDYLAPQIFNLSTTALSLGTTGQWWASERLA HHHHHCCEEEECCCCHHHHHHHHHHHHCCCHHHCCHHCCCCHHEEECCCCCCCCCCCCEE LQGTVLAGLGYSAASTLRRTTEDRDYHYGVAPRLSLALRLIAGDRASVDLQAQKYFLGSI EEEEEEECCCHHHHHHHHHHCCCCCEECCCCHHHHHHHHHEECCCCCEEHHHHHHHHHHH ANRAAGRDDITRVDTAFNWRLHKRHAVGVKYVWSHRDANYPGAGDRSQTLGTVGIYYTLL HHHCCCCCCHHHHHHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHEEEEEEE GADGFGAVEWREPAVH CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA