| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is livH [H]
Identifier: 124024661
GI number: 124024661
Start: 2626706
End: 2627860
Strand: Reverse
Name: livH [H]
Synonym: P9303_29731
Alternate gene names: 124024661
Gene position: 2627860-2626706 (Counterclockwise)
Preceding gene: 124024662
Following gene: 124024660
Centisome position: 97.96
GC content: 56.28
Gene sequence:
>1155_bases GTGCAACTGCTTCTTGAAAGTCTTTTCAATGGTGTGGCCATCGGCTCGGTGCTGCTGGTTGCTGCCCTCGGACTGGCGAT AGTCTTCGGCCTGATGGGTGTCATTAACCTCGCCCATGGCGAGTTGATCATGCTCGGGGCCTACACCACTTATGTGGTAC AGCTGATCTTCAAGCTGCCTGCTTTGCAGCCTGTCTACAACGCTTATGTGTTGGTGGCGATTCCTCTGGCCTTCATCGTT AGTGGTGTGGTTGGTATCTTGCTAGAACGCACCGTGATTCGTCGTCTCTACGGCAACCCGTTGGAGACATTGTTGGCGAC ATGGGGCGTCAGCCTGATTCTGCAGCAGTTTGTGCGCAGTGTTCCATTGGCTTATGCGGCTGGCTTGGTGCTGGCGTTAG TGCTTGGCTTTAGTCTGCCGATCATTCTTCCTGACAAGCTTTTGCAGGGGCCGCGGGCCCGCCTGGTGCGTGCTGGAAGC TGGCTTGTGTCGGCTCTGGCTGGGGTGTTACTGGCGGGTGGCTTGGCCTCTCAGATCAGTCGTATCGCTCGTGCGACCTC TCGCAATGTCGATGTCACGGCACCTAAGTGGATGCGTGGGGGGATTGAACTGTCGGGCATGACCTTCCCTGTGCCACGCT TAGTGATCATTGTGATCACGATCCTCGCTGTACTCGGTATCACCTGGTTCTTGAATCGCAGTGTGTGGGGGATGCGCATC AGGGCAGTGACTCAGAATCGCTCCATGAGTGATTGCCTTGGTATCTCAACCGATACCGTGGATGTGCTTACCTTTGGTAT CGGCTCCGGTTTGGCTGGCATCGCGGGGGTAGCGGTGTCTCTGTTGGGATCCGTGGGACCCAACGTCGGCACTTCTTATA TCGTTGGTTGCTTCATGGTGGTGGTGCTTGGCGGCGTGGGAAATCTGTTCGGCACCGTGTTGGCCTCCTTTGCTATTGGG GTGCTAACAGACCTGATCGGTGCTGGCCGTTTGCTCAGTATCTGGCCTTCGATGCCTGCGCCTTTGGCGAGCGTGGTTGA TTTTTTTGCTACCACGAGCATGGCCCAGGTGATGGTCTTTGCGCTGATTGTGGTGTTCCTTCAGTTCCGTCCTGCTGGTC TGTTTCCCCAGAGGGGACGCATGGTGGAGGCTTAA
Upstream 100 bases:
>100_bases GATTACCTTGTCAAGGCGTTTTTCCGCTTTGGCATTGTTTGGGAGGAGTCCGGAAACGGGCTCCTCCTTTCGTCGTTTTT CCGGTCTCTGATCTTCGCCC
Downstream 100 bases:
>100_bases ATCAATGTTGAAAGCGTTTCAACAACGCCGTTGGCCCCTGGTGATTGTCTGGGTCTTGATCATTGCTGCGATTGTGGCGG CGCCTGCAGTGGTGTCGGTA
Product: urea ABC transporter
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MQLLLESLFNGVAIGSVLLVAALGLAIVFGLMGVINLAHGELIMLGAYTTYVVQLIFKLPALQPVYNAYVLVAIPLAFIV SGVVGILLERTVIRRLYGNPLETLLATWGVSLILQQFVRSVPLAYAAGLVLALVLGFSLPIILPDKLLQGPRARLVRAGS WLVSALAGVLLAGGLASQISRIARATSRNVDVTAPKWMRGGIELSGMTFPVPRLVIIVITILAVLGITWFLNRSVWGMRI RAVTQNRSMSDCLGISTDTVDVLTFGIGSGLAGIAGVAVSLLGSVGPNVGTSYIVGCFMVVVLGGVGNLFGTVLASFAIG VLTDLIGAGRLLSIWPSMPAPLASVVDFFATTSMAQVMVFALIVVFLQFRPAGLFPQRGRMVEA
Sequences:
>Translated_384_residues MQLLLESLFNGVAIGSVLLVAALGLAIVFGLMGVINLAHGELIMLGAYTTYVVQLIFKLPALQPVYNAYVLVAIPLAFIV SGVVGILLERTVIRRLYGNPLETLLATWGVSLILQQFVRSVPLAYAAGLVLALVLGFSLPIILPDKLLQGPRARLVRAGS WLVSALAGVLLAGGLASQISRIARATSRNVDVTAPKWMRGGIELSGMTFPVPRLVIIVITILAVLGITWFLNRSVWGMRI RAVTQNRSMSDCLGISTDTVDVLTFGIGSGLAGIAGVAVSLLGSVGPNVGTSYIVGCFMVVVLGGVGNLFGTVLASFAIG VLTDLIGAGRLLSIWPSMPAPLASVVDFFATTSMAQVMVFALIVVFLQFRPAGLFPQRGRMVEA >Mature_384_residues MQLLLESLFNGVAIGSVLLVAALGLAIVFGLMGVINLAHGELIMLGAYTTYVVQLIFKLPALQPVYNAYVLVAIPLAFIV SGVVGILLERTVIRRLYGNPLETLLATWGVSLILQQFVRSVPLAYAAGLVLALVLGFSLPIILPDKLLQGPRARLVRAGS WLVSALAGVLLAGGLASQISRIARATSRNVDVTAPKWMRGGIELSGMTFPVPRLVIIVITILAVLGITWFLNRSVWGMRI RAVTQNRSMSDCLGISTDTVDVLTFGIGSGLAGIAGVAVSLLGSVGPNVGTSYIVGCFMVVVLGGVGNLFGTVLASFAIG VLTDLIGAGRLLSIWPSMPAPLASVVDFFATTSMAQVMVFALIVVFLQFRPAGLFPQRGRMVEA
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 40428; Mature: 40428
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLLESLFNGVAIGSVLLVAALGLAIVFGLMGVINLAHGELIMLGAYTTYVVQLIFKLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC ALQPVYNAYVLVAIPLAFIVSGVVGILLERTVIRRLYGNPLETLLATWGVSLILQQFVRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VPLAYAAGLVLALVLGFSLPIILPDKLLQGPRARLVRAGSWLVSALAGVLLAGGLASQIS CHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RIARATSRNVDVTAPKWMRGGIELSGMTFPVPRLVIIVITILAVLGITWFLNRSVWGMRI HHHHHHCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE RAVTQNRSMSDCLGISTDTVDVLTFGIGSGLAGIAGVAVSLLGSVGPNVGTSYIVGCFMV EEHHCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VVLGGVGNLFGTVLASFAIGVLTDLIGAGRLLSIWPSMPAPLASVVDFFATTSMAQVMVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALIVVFLQFRPAGLFPQRGRMVEA HHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MQLLLESLFNGVAIGSVLLVAALGLAIVFGLMGVINLAHGELIMLGAYTTYVVQLIFKLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCC ALQPVYNAYVLVAIPLAFIVSGVVGILLERTVIRRLYGNPLETLLATWGVSLILQQFVRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH VPLAYAAGLVLALVLGFSLPIILPDKLLQGPRARLVRAGSWLVSALAGVLLAGGLASQIS CHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH RIARATSRNVDVTAPKWMRGGIELSGMTFPVPRLVIIVITILAVLGITWFLNRSVWGMRI HHHHHHCCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHEE RAVTQNRSMSDCLGISTDTVDVLTFGIGSGLAGIAGVAVSLLGSVGPNVGTSYIVGCFMV EEHHCCCCHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH VVLGGVGNLFGTVLASFAIGVLTDLIGAGRLLSIWPSMPAPLASVVDFFATTSMAQVMVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALIVVFLQFRPAGLFPQRGRMVEA HHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]