| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024637
Identifier: 124024637
GI number: 124024637
Start: 2608842
End: 2609162
Strand: Reverse
Name: 124024637
Synonym: P9303_29491
Alternate gene names: NA
Gene position: 2609162-2608842 (Counterclockwise)
Preceding gene: 124024640
Following gene: 124024636
Centisome position: 97.26
GC content: 55.14
Gene sequence:
>321_bases ATGGCGCAAGATCTACCGATCCACAAACGGCTGGTCATTCCTTCTCCGGAATTGCAGTGGCGATTCTCTAGGTCGTCTGG TCCTGGGGGGCAAGGAGTGAACACCACCGACTCTCGCGTTGAGTTGGTTTTTGATCTGGCTGCGTCGACTGTCTTGGGCC CATTTCAGAGTATCCAAGCGGCTGGTGGAGCTGGACTTTCGCCGCCATCTCCACAGGCTGTGAAATCTGGAGCCCACGCT GGCAACAGGGTGCCTTTGAAGCGATGCCCGCCTTCATTGAAAGGAAACTGCGCTGATGAGCGAACACTCAGATTTATCTG A
Upstream 100 bases:
>100_bases TCCAGCCACTTGCTGTTGTCGAAGGGCTGTCCATGGCAAGGAGGCCTAAAACTCTCTTCCAGCTAAGTCCCCCGTAGGGC TTGGATGTCAGCGTGGGGTT
Downstream 100 bases:
>100_bases TCAAACCATCAATACTCAAGGCGCCATCATTTTGGCATTGCTAATGCCGCTTCCCGGATTCGGCTATATGAAGGTCCCTA CGACGGCACGACATATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidyl-TRNA Hydrolase Domain Protein; Protein Chain Release Factor B; Aminoacyl-TRNA Hydrolase
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MAQDLPIHKRLVIPSPELQWRFSRSSGPGGQGVNTTDSRVELVFDLAASTVLGPFQSIQAAGGAGLSPPSPQAVKSGAHA GNRVPLKRCPPSLKGNCADERTLRFI
Sequences:
>Translated_106_residues MAQDLPIHKRLVIPSPELQWRFSRSSGPGGQGVNTTDSRVELVFDLAASTVLGPFQSIQAAGGAGLSPPSPQAVKSGAHA GNRVPLKRCPPSLKGNCADERTLRFI >Mature_105_residues AQDLPIHKRLVIPSPELQWRFSRSSGPGGQGVNTTDSRVELVFDLAASTVLGPFQSIQAAGGAGLSPPSPQAVKSGAHAG NRVPLKRCPPSLKGNCADERTLRFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11173; Mature: 11042
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDLPIHKRLVIPSPELQWRFSRSSGPGGQGVNTTDSRVELVFDLAASTVLGPFQSIQA CCCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH AGGAGLSPPSPQAVKSGAHAGNRVPLKRCPPSLKGNCADERTLRFI CCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECC >Mature Secondary Structure AQDLPIHKRLVIPSPELQWRFSRSSGPGGQGVNTTDSRVELVFDLAASTVLGPFQSIQA CCCCCCCCEEECCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH AGGAGLSPPSPQAVKSGAHAGNRVPLKRCPPSLKGNCADERTLRFI CCCCCCCCCCCHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA