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The map label for this gene is ycgR [H]

Identifier: 124024620

GI number: 124024620

Start: 2594523

End: 2595479

Strand: Reverse

Name: ycgR [H]

Synonym: P9303_29321

Alternate gene names: 124024620

Gene position: 2595479-2594523 (Counterclockwise)

Preceding gene: 124024621

Following gene: 124024619

Centisome position: 96.75

GC content: 57.89

Gene sequence:

>957_bases
ATGGATAGGCTCGCCACAGCCTGGGCGATATTTCAGGGCCTTCTGCTTGAAGCGATTCCCTTCCTGTTGCTGGGTGTCAC
CATTGCTGGCCTGGCCCGCTGGCTTGTACCCCAGGGGGCCTGGATCGGACGTCTCCCCCGGCATCCACTGCTAGCGCCGA
TCACGGGTGCCTTAATGGGTTTTGCCCTACCTGCTTGTGAATGCGGCAATGTTCCTGTCGCCCGCCGCTTACTGGCCAGC
GGTGCTCCTCTGGGCACAGCCTTCGGCTTTTTGTTTGCAGCGCCAGTCCTGAATCCGATCGTTCTCGCCAGCACCTGGGC
CGCCTTCCCTGATCAGTCTTGGTTGCTGATTGCTAGACCACTCGGAGCCTTTCTAATTGCTCTGTTACTGAGTGCTTTTT
TGGTGCAGCTCCCAGAAGCGCAGCTGATTGAATCGTCCCTATTGGCAGAACGGCGTCTTAGCCAGCCCTTGAGCAGTATC
GGTCTATTAGAAAGAGGCGCTGGGCTGATCGGAGCCGCGCGACCCGATCCACAACCAACAAGGATCAAGCGACTGCAACT
CAGTGAGGTGCTCGAACAAAGCAGCCGGGAATTTCTTGATCTGCTTGCTCTGCTCGTGCTCGGTTGTGTGATCGCCGCCC
TTGTGCAGACCTGGTTGCCACGCAGTTGGCTCTTGGCGGTAGGCAGCGCGCCGACACTCTCGATTTTGGCGTTGATGCTG
CTGGCGATTGTGGTCTCGGTGTGCTCAAGCGTGGATGCCTTTCTGGCCCTTGGTTTTGCTGCCCAGGTGACACCCGGAGC
CCTGCTGGCGTTCCTGTTACTGGGTCCGGTGGTGGATCTGAAACTTGCAGGTCTGTTCACGGTGTTGCTCAGGCCAAAAG
CAATTGGCATCACAGCAATCGTGGCCTGTCTAGGCGTGCTGCTCATCGGCCAGTGGGTCAATTTATGGCAACTTTGA

Upstream 100 bases:

>100_bases
CGCTGGGCATAAGTTTTCAACCTGACCCATCCAATATCATGAAAAATTCTGCAAATGATTTCCATTGCTGCAGAATCAGC
CACATGCACAGTTGAGCTAG

Downstream 100 bases:

>100_bases
ACAGGACAAAACAATGATGCGTGCCCTGCTTCTGCAGCTGTGGGGATGGATGGTGGTCTGGAGTGTTCATTCAGGCCGCC
TCGATCTCCTTCTCGCAGGT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQGAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSAFLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAARPDPQPTRIKRLQLSEVLEQSSREFLDLLALLVLGCVIAALVQTWLPRSWLLAVGSAPTLSILALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL

Sequences:

>Translated_318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQGAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSAFLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAARPDPQPTRIKRLQLSEVLEQSSREFLDLLALLVLGCVIAALVQTWLPRSWLLAVGSAPTLSILALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL
>Mature_318_residues
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQGAWIGRLPRHPLLAPITGALMGFALPACECGNVPVARRLLAS
GAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARPLGAFLIALLLSAFLVQLPEAQLIESSLLAERRLSQPLSSI
GLLERGAGLIGAARPDPQPTRIKRLQLSEVLEQSSREFLDLLALLVLGCVIAALVQTWLPRSWLLAVGSAPTLSILALML
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAIVACLGVLLIGQWVNLWQL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 33635; Mature: 33635

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQGAWIGRLPRHPLLAPITGALMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHH
FALPACECGNVPVARRLLASGAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARP
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
LGAFLIALLLSAFLVQLPEAQLIESSLLAERRLSQPLSSIGLLERGAGLIGAARPDPQPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHH
RIKRLQLSEVLEQSSREFLDLLALLVLGCVIAALVQTWLPRSWLLAVGSAPTLSILALML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VACLGVLLIGQWVNLWQL
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRLATAWAIFQGLLLEAIPFLLLGVTIAGLARWLVPQGAWIGRLPRHPLLAPITGALMG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHH
FALPACECGNVPVARRLLASGAPLGTAFGFLFAAPVLNPIVLASTWAAFPDQSWLLIARP
HHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHH
LGAFLIALLLSAFLVQLPEAQLIESSLLAERRLSQPLSSIGLLERGAGLIGAARPDPQPT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCHH
RIKRLQLSEVLEQSSREFLDLLALLVLGCVIAALVQTWLPRSWLLAVGSAPTLSILALML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHH
LAIVVSVCSSVDAFLALGFAAQVTPGALLAFLLLGPVVDLKLAGLFTVLLRPKAIGITAI
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VACLGVLLIGQWVNLWQL
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]