| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024598
Identifier: 124024598
GI number: 124024598
Start: 2572231
End: 2573019
Strand: Reverse
Name: 124024598
Synonym: P9303_29101
Alternate gene names: NA
Gene position: 2573019-2572231 (Counterclockwise)
Preceding gene: 124024599
Following gene: 124024596
Centisome position: 95.91
GC content: 54.12
Gene sequence:
>789_bases ATGGGGCGCTACTTACTCAGCCTGAAGCGTTTTTGGGGCACGGCATTGGCTGGGCAGTTGGAGTATCAGGTCAACATGCT GATCGATTTGGTGGCCATGGTCGGCAGTTTGGCTGGCAGCATCTTTGTGCTGTCTGTGTTCTTTGGGCAGGGGCGAGAAC TGGGTGGTTGGAGTTGGGAAGCTGCCCTTGTGGTTCAGGGCATTTACACCTTTTTGGATGGCGTTTCAAGCACTTGGCTA CGACCAAACCTCGGTGCGATTGTCACCCACGTGCGTGAGGGCACTTTGGATTTTGTGCTGTTGAAGCCGATCGATAGCCA GTTTTGGGTATCGCTACGCATCATGGCGCCGGCGGGCCTTCCGGAAATGGGGTTGGGGTTGGTTTTGATCGTCTGGGCTG CATCCCGGGCAGGCGCATCTTTCAGCCTTGGCACAGTATTGGTAGCTGTTTTGATGCTTTGTGTAGGCGGTGTGATTCTC TATGCCCTGTGGTTTGTGATTGCTGCCACGAGCATCTGGTTCGTGAAGACCTGGAATGCCACTGAAGTGCTAAGGGCCGT GCTGGCTTCCGGTCGGTTCCCAGTGAGTGCTTATCCGCCGACTCTGCGCTTGGTGTTCACTTTGGTGTTACCGGTTGCTT TTTTGACCACGGTTCCAGCAGAGGTCATCCTTGGTCGTGCGGCCATGCCGATGTTGGCTTTGGGATTGTTTTTGGCTGTG ATTTTTTTTGTTGGCAGCCGGGCTTTTTGGCTGTTCGCTTTGCGCTATTACACATCAGCTTCGAGTTGA
Upstream 100 bases:
>100_bases GGCTTTGCGGCTCAGTTGTTTTGGGTAGCGTTATTGCTGCCTTTGGTGTTGATGGCTTGGCGCGCTGGGGTGCGTCGCTA TACAGCGATGGGGGCTTGAG
Downstream 100 bases:
>100_bases TGTGTCTTGCCGGTGGGTATTGGTTTGAGGCTTGGATTTAGGTGTCGCTTCCGACACCATGGTGTACTCGGAAAAGGTTG GTGGGGTTGTAACCCAGTTT
Product: membrane protein, multidrug efflux associated
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWL RPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVIL YALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV IFFVGSRAFWLFALRYYTSASS
Sequences:
>Translated_262_residues MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWL RPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVIL YALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV IFFVGSRAFWLFALRYYTSASS >Mature_261_residues GRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWLR PNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILY ALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAVI FFVGSRAFWLFALRYYTSASS
Specific function: Unknown
COG id: COG3694
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28450; Mature: 28319
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH AALVVQGIYTFLDGVSSTWLRPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGL HHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCC PEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILYALWFVIAATSIWFVKTWNA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH TEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IFFVGSRAFWLFALRYYTSASS HHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH AALVVQGIYTFLDGVSSTWLRPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGL HHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCC PEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILYALWFVIAATSIWFVKTWNA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH TEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH IFFVGSRAFWLFALRYYTSASS HHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA