Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124024598

Identifier: 124024598

GI number: 124024598

Start: 2572231

End: 2573019

Strand: Reverse

Name: 124024598

Synonym: P9303_29101

Alternate gene names: NA

Gene position: 2573019-2572231 (Counterclockwise)

Preceding gene: 124024599

Following gene: 124024596

Centisome position: 95.91

GC content: 54.12

Gene sequence:

>789_bases
ATGGGGCGCTACTTACTCAGCCTGAAGCGTTTTTGGGGCACGGCATTGGCTGGGCAGTTGGAGTATCAGGTCAACATGCT
GATCGATTTGGTGGCCATGGTCGGCAGTTTGGCTGGCAGCATCTTTGTGCTGTCTGTGTTCTTTGGGCAGGGGCGAGAAC
TGGGTGGTTGGAGTTGGGAAGCTGCCCTTGTGGTTCAGGGCATTTACACCTTTTTGGATGGCGTTTCAAGCACTTGGCTA
CGACCAAACCTCGGTGCGATTGTCACCCACGTGCGTGAGGGCACTTTGGATTTTGTGCTGTTGAAGCCGATCGATAGCCA
GTTTTGGGTATCGCTACGCATCATGGCGCCGGCGGGCCTTCCGGAAATGGGGTTGGGGTTGGTTTTGATCGTCTGGGCTG
CATCCCGGGCAGGCGCATCTTTCAGCCTTGGCACAGTATTGGTAGCTGTTTTGATGCTTTGTGTAGGCGGTGTGATTCTC
TATGCCCTGTGGTTTGTGATTGCTGCCACGAGCATCTGGTTCGTGAAGACCTGGAATGCCACTGAAGTGCTAAGGGCCGT
GCTGGCTTCCGGTCGGTTCCCAGTGAGTGCTTATCCGCCGACTCTGCGCTTGGTGTTCACTTTGGTGTTACCGGTTGCTT
TTTTGACCACGGTTCCAGCAGAGGTCATCCTTGGTCGTGCGGCCATGCCGATGTTGGCTTTGGGATTGTTTTTGGCTGTG
ATTTTTTTTGTTGGCAGCCGGGCTTTTTGGCTGTTCGCTTTGCGCTATTACACATCAGCTTCGAGTTGA

Upstream 100 bases:

>100_bases
GGCTTTGCGGCTCAGTTGTTTTGGGTAGCGTTATTGCTGCCTTTGGTGTTGATGGCTTGGCGCGCTGGGGTGCGTCGCTA
TACAGCGATGGGGGCTTGAG

Downstream 100 bases:

>100_bases
TGTGTCTTGCCGGTGGGTATTGGTTTGAGGCTTGGATTTAGGTGTCGCTTCCGACACCATGGTGTACTCGGAAAAGGTTG
GTGGGGTTGTAACCCAGTTT

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWL
RPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVIL
YALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV
IFFVGSRAFWLFALRYYTSASS

Sequences:

>Translated_262_residues
MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWL
RPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVIL
YALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV
IFFVGSRAFWLFALRYYTSASS
>Mature_261_residues
GRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWEAALVVQGIYTFLDGVSSTWLR
PNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGLPEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILY
ALWFVIAATSIWFVKTWNATEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAVI
FFVGSRAFWLFALRYYTSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28450; Mature: 28319

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AALVVQGIYTFLDGVSSTWLRPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGL
HHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCC
PEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILYALWFVIAATSIWFVKTWNA
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH
TEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IFFVGSRAFWLFALRYYTSASS
HHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GRYLLSLKRFWGTALAGQLEYQVNMLIDLVAMVGSLAGSIFVLSVFFGQGRELGGWSWE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
AALVVQGIYTFLDGVSSTWLRPNLGAIVTHVREGTLDFVLLKPIDSQFWVSLRIMAPAGL
HHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCC
PEMGLGLVLIVWAASRAGASFSLGTVLVAVLMLCVGGVILYALWFVIAATSIWFVKTWNA
CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCH
TEVLRAVLASGRFPVSAYPPTLRLVFTLVLPVAFLTTVPAEVILGRAAMPMLALGLFLAV
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
IFFVGSRAFWLFALRYYTSASS
HHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA