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The map label for this gene is ydjX [C]

Identifier: 124024596

GI number: 124024596

Start: 2571130

End: 2571729

Strand: Reverse

Name: ydjX [C]

Synonym: P9303_29081

Alternate gene names: 124024596

Gene position: 2571729-2571130 (Counterclockwise)

Preceding gene: 124024598

Following gene: 124024592

Centisome position: 95.86

GC content: 56.0

Gene sequence:

>600_bases
TTGGAGTCTTGGCTGCCTTTCTTGCAGACACCTATTGGTGCAGTTCTGTTTGTGCCTCTCTATGCACTTTGGGTCACCTT
GTTGTTGCCAGGGGTCTGGGCCTCGATGCTTGCAGGTGCGCTCTTCGGGACTGGGTTAGGCAGTTTGCTGGTGTTTGTCG
GCGCCTGCTTGGGTGCAGAGGCATCCTTTCTGCTTGGACGTTACTGGCTCAGGAATTGGGCTCGACGTCGCTTGGCAGTT
GTGCCAAAACTGCAGGCTGTTGAGAAGGCCGTGAGTCGTGAGGGTCTCAAGTTGGTGCTCTTAACCCGCCTGTCTCCGGC
GTTCCCTTTTAGTGTGCTCAACCTGGCATATGGCCTCAGTGAGGTGAGCCTGCGGGATTATTCGATCGGTTTGATCGGCA
TTCTTCCTGGCACTGTTTTGTTTTGTGGTTTTGGTGCACTGGCTGGAGATGTGGCGCGATTTGGGGATGTTCTCTCTGGC
CAGGCTGACCCCGCCACCTGGATTCTCAGGATTGTTGGGGTGTTGGCCACGGTTGTGGTGGTATGGCTGGTAGGCCTTGC
AGCCAAGCGAGCTCTTCAGGATCCCGAGCCATCCAGTTGA

Upstream 100 bases:

>100_bases
CAGTTTTCGCCGACGCATCGCCAACTCTGCATGAATCTTGAGTATGAGATGTATTGGTGTTGCATGCAGATCGCTTGTGT
TGATCGATCCGGGGACTTGG

Downstream 100 bases:

>100_bases
TCTGGGTTGTCTAGCTGCCAGTCTTTGAGGGCGGCAAAGAACACGAACCAGCTCAGCCGGAGGCGTGCAAGCACCCCAGT
GCGTTGAGCCAGATCTGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MESWLPFLQTPIGAVLFVPLYALWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEASFLLGRYWLRNWARRRLAV
VPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSG
QADPATWILRIVGVLATVVVVWLVGLAAKRALQDPEPSS

Sequences:

>Translated_199_residues
MESWLPFLQTPIGAVLFVPLYALWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEASFLLGRYWLRNWARRRLAV
VPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSG
QADPATWILRIVGVLATVVVVWLVGLAAKRALQDPEPSS
>Mature_199_residues
MESWLPFLQTPIGAVLFVPLYALWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAEASFLLGRYWLRNWARRRLAV
VPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLSEVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSG
QADPATWILRIVGVLATVVVVWLVGLAAKRALQDPEPSS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=202, Percent_Identity=33.6633663366337, Blast_Score=90, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21237; Mature: 21237

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESWLPFLQTPIGAVLFVPLYALWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ASFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCHHHHHHHHHHHH
EVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSGQADPATWILRIVGVLATVVV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VWLVGLAAKRALQDPEPSS
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MESWLPFLQTPIGAVLFVPLYALWVTLLLPGVWASMLAGALFGTGLGSLLVFVGACLGAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
ASFLLGRYWLRNWARRRLAVVPKLQAVEKAVSREGLKLVLLTRLSPAFPFSVLNLAYGLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCCCHHHHHHHHHHHH
EVSLRDYSIGLIGILPGTVLFCGFGALAGDVARFGDVLSGQADPATWILRIVGVLATVVV
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VWLVGLAAKRALQDPEPSS
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]