| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is crp [C]
Identifier: 124024520
GI number: 124024520
Start: 2496689
End: 2497384
Strand: Reverse
Name: crp [C]
Synonym: P9303_28321
Alternate gene names: 124024520
Gene position: 2497384-2496689 (Counterclockwise)
Preceding gene: 124024525
Following gene: 124024518
Centisome position: 93.09
GC content: 52.44
Gene sequence:
>696_bases ATGGCTGTTTTCAGCGTTGAGCAGTTGCAGGCTGTGCAATTTTTTTCGGCTTTAACAACGGATGATTGTGAGCAATTATT GGATCGCCATCTTGAGTCCATTCATGGTGCTGAACAGGTTTTCGTGATGGAGCAAGACTGGGGTGAGTCGGTTTTTCTGT TGTGCTCAGGGATGGCGAAAGTACGCAGTTATACGGCTGATGGCGATGAAGTTGTGATGTCAGTGTTGGGGGAGGGGGAC CTGTTTGGTGAGATGGCTGCTCTTGATGCAGCACCCAGGTCTGCTGATGTTGTGGCCTTAACGCCAGTGAAACTTTTGAA GATGAGAGCGTCGCCTTTTGTGGCTTTGCTGCGCAAGGAAGTGGGCTTTGCGATTGCCCTTGCTCAGCTTGAGGCATCTC GCTTGCGGGATCTCAATCAGCGTTTTGCAATCCAGACCAGTGATGCCACGACACGCTTACTCAATGCATTGGCTTACTTG GCTCGCAAGAGTTCTTCTGCTGATGATCCCAAAGCGGCGATTCCGCCCTTAGCTCAAAGGGAGTTGGGTCTCATGGCAGG TTTGTCCAGGGAGACTGCCTCCCGGACATTGAGCAAGCTGCGCAGTCGTGGAACACTGGAGGAGGTTGAAGGCTGTCTGC GTTTGGTGGATCTGCAGCCGCTGGTTAAACGAGGTCTGTTGCCGCTTGGCTCTTAG
Upstream 100 bases:
>100_bases TAGTGTGTGAGTGAAGGTTGACTAATGTGCAAATAAATGATTCATATTGAAGAGTGATTTAGGGGTTGCATTATTGTTCA ATAACTAAAAATAATGAAAC
Downstream 100 bases:
>100_bases AGCTTTTGAGCACGTTTACGGGTTGAATTGACCAGCCAGAATCGTCTTAGACTTAGGACTGTTAGGAAAGCTTTCAGAAA AACAAGTTGCTGATCTCGAG
Product: regulatory protein
Products: NA
Alternate protein names: Crp/Fnr Family Transcriptional Regulator; Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Catabolite Gene Activator; CAMP-Dependent Transcriptional Regulator; Cyclic AMP Receptor Protein; Catabolite Gene Activator Protein; Regulatory Protein; CAMP Receptor Protein; CAMP-Dependent Protein Kinase; Transcriptional Regulator Crp/Fnr Family Protein
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MAVFSVEQLQAVQFFSALTTDDCEQLLDRHLESIHGAEQVFVMEQDWGESVFLLCSGMAKVRSYTADGDEVVMSVLGEGD LFGEMAALDAAPRSADVVALTPVKLLKMRASPFVALLRKEVGFAIALAQLEASRLRDLNQRFAIQTSDATTRLLNALAYL ARKSSSADDPKAAIPPLAQRELGLMAGLSRETASRTLSKLRSRGTLEEVEGCLRLVDLQPLVKRGLLPLGS
Sequences:
>Translated_231_residues MAVFSVEQLQAVQFFSALTTDDCEQLLDRHLESIHGAEQVFVMEQDWGESVFLLCSGMAKVRSYTADGDEVVMSVLGEGD LFGEMAALDAAPRSADVVALTPVKLLKMRASPFVALLRKEVGFAIALAQLEASRLRDLNQRFAIQTSDATTRLLNALAYL ARKSSSADDPKAAIPPLAQRELGLMAGLSRETASRTLSKLRSRGTLEEVEGCLRLVDLQPLVKRGLLPLGS >Mature_230_residues AVFSVEQLQAVQFFSALTTDDCEQLLDRHLESIHGAEQVFVMEQDWGESVFLLCSGMAKVRSYTADGDEVVMSVLGEGDL FGEMAALDAAPRSADVVALTPVKLLKMRASPFVALLRKEVGFAIALAQLEASRLRDLNQRFAIQTSDATTRLLNALAYLA RKSSSADDPKAAIPPLAQRELGLMAGLSRETASRTLSKLRSRGTLEEVEGCLRLVDLQPLVKRGLLPLGS
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25079; Mature: 24948
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFSVEQLQAVQFFSALTTDDCEQLLDRHLESIHGAEQVFVMEQDWGESVFLLCSGMAK CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH VRSYTADGDEVVMSVLGEGDLFGEMAALDAAPRSADVVALTPVKLLKMRASPFVALLRKE HHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCHHHHHHHHH VGFAIALAQLEASRLRDLNQRFAIQTSDATTRLLNALAYLARKSSSADDPKAAIPPLAQR HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH ELGLMAGLSRETASRTLSKLRSRGTLEEVEGCLRLVDLQPLVKRGLLPLGS HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVFSVEQLQAVQFFSALTTDDCEQLLDRHLESIHGAEQVFVMEQDWGESVFLLCSGMAK CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH VRSYTADGDEVVMSVLGEGDLFGEMAALDAAPRSADVVALTPVKLLKMRASPFVALLRKE HHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCHHHHHHHHH VGFAIALAQLEASRLRDLNQRFAIQTSDATTRLLNALAYLARKSSSADDPKAAIPPLAQR HHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH ELGLMAGLSRETASRTLSKLRSRGTLEEVEGCLRLVDLQPLVKRGLLPLGS HHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA