| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024508
Identifier: 124024508
GI number: 124024508
Start: 2482051
End: 2482473
Strand: Reverse
Name: 124024508
Synonym: P9303_28201
Alternate gene names: NA
Gene position: 2482473-2482051 (Counterclockwise)
Preceding gene: 124024510
Following gene: 124024507
Centisome position: 92.54
GC content: 53.9
Gene sequence:
>423_bases ATGAAGGCGCCCAAGATCCTGATCAACACCAACTACACGATCACCGCCATGTCGCGTTTGGATCGTCGTCGTCTCCACTT CGCCCCTGTCAGTCAGTACTACGGGGTCCTGGGGGACAGCGGTAAGTCGATCGCTGATGTCCATGGAGGTTGGTTGCTTG AGGACAACTGGTCCAAAGAGGACTGGATTGCCTTTTATGTGACCTGCGTCCAATGCCTCCACCAGTACCTGGAGAAAGGT CTTTTCCGCTTCGATGACGAGGTTCTTGCTGATCGCCAGTTGATCAGTGCCGCTGGGGGCAACGAAGACCTCCTCAACAC TCTCAAGACCTTCATCAAAGAGGTCGTCGCCAGTGGTGGGGAATGCACCAAGCAGCAGGTCCTGGATACCAACCTTTGTT CCTCTTCTTTAGACCAAAGATGA
Upstream 100 bases:
>100_bases TTGGTATGAATGCTTAATAGGTGTAAGTCAGTGACTGCATGCCATAGATGCTTAATCTTATATCGATGGCAGGGAGAAGA GTGACTACGTCATCCCCAGG
Downstream 100 bases:
>100_bases CAACACCAAGAGAGATGCCCTGACCACAACGCTTCATGAACATCTCCCCTTCTTCTGCCAACTCCTCTTGAGTCATTGCG TTCGAGACAGCAGTGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKAPKILINTNYTITAMSRLDRRRLHFAPVSQYYGVLGDSGKSIADVHGGWLLEDNWSKEDWIAFYVTCVQCLHQYLEKG LFRFDDEVLADRQLISAAGGNEDLLNTLKTFIKEVVASGGECTKQQVLDTNLCSSSLDQR
Sequences:
>Translated_140_residues MKAPKILINTNYTITAMSRLDRRRLHFAPVSQYYGVLGDSGKSIADVHGGWLLEDNWSKEDWIAFYVTCVQCLHQYLEKG LFRFDDEVLADRQLISAAGGNEDLLNTLKTFIKEVVASGGECTKQQVLDTNLCSSSLDQR >Mature_140_residues MKAPKILINTNYTITAMSRLDRRRLHFAPVSQYYGVLGDSGKSIADVHGGWLLEDNWSKEDWIAFYVTCVQCLHQYLEKG LFRFDDEVLADRQLISAAGGNEDLLNTLKTFIKEVVASGGECTKQQVLDTNLCSSSLDQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15777; Mature: 15777
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAPKILINTNYTITAMSRLDRRRLHFAPVSQYYGVLGDSGKSIADVHGGWLLEDNWSKE CCCCEEEEECCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHCCCCEEECCCCCCH DWIAFYVTCVQCLHQYLEKGLFRFDDEVLADRQLISAAGGNEDLLNTLKTFIKEVVASGG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC ECTKQQVLDTNLCSSSLDQR CHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAPKILINTNYTITAMSRLDRRRLHFAPVSQYYGVLGDSGKSIADVHGGWLLEDNWSKE CCCCEEEEECCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEHHCCCCEEECCCCCCH DWIAFYVTCVQCLHQYLEKGLFRFDDEVLADRQLISAAGGNEDLLNTLKTFIKEVVASGG HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC ECTKQQVLDTNLCSSSLDQR CHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA