| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024500
Identifier: 124024500
GI number: 124024500
Start: 2479252
End: 2479530
Strand: Reverse
Name: 124024500
Synonym: P9303_28121
Alternate gene names: NA
Gene position: 2479530-2479252 (Counterclockwise)
Preceding gene: 124024504
Following gene: 124024498
Centisome position: 92.43
GC content: 53.41
Gene sequence:
>279_bases ATGGCACGGTTCTCAGGCAGGCAGCTATCACCCAGCCCTTCTTATGACCCCGAGGAGTGGCAGTGCATGGATGAGGGCAC GCTCAAATCCTCGCGATCAGGAGCAGTGTGCATGACCTGTAATCACTTCCGTTATGCGGTCGGGAAGCATTGCCAGACCT TATTGACCTGTCCTATCCATCAACGCTTGATTCCTCAAGGACAGCACCTCAATTGCAAATGCCATCAATGGATCATCACA AGGGAGCTGGAGGTTGGATGGGCACCTGAGGTTGCATAG
Upstream 100 bases:
>100_bases CCGGATTCTTCTGAGCACTGGAGATCAGAGCATTCACCACCAGCGACTTGACCCAACCAACCCCTTTGGGCTAGTACGAT TGTACTTGAGGCAAGGGTTG
Downstream 100 bases:
>100_bases CAGGAGGGGTTGGTAGAAGATCAGATGCATTCAAGAAAGAAGCAACGATGTCTCTGGTACCTCGCTGGGAAGTCATGACC GATGAGGCAAAGGCAATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MARFSGRQLSPSPSYDPEEWQCMDEGTLKSSRSGAVCMTCNHFRYAVGKHCQTLLTCPIHQRLIPQGQHLNCKCHQWIIT RELEVGWAPEVA
Sequences:
>Translated_92_residues MARFSGRQLSPSPSYDPEEWQCMDEGTLKSSRSGAVCMTCNHFRYAVGKHCQTLLTCPIHQRLIPQGQHLNCKCHQWIIT RELEVGWAPEVA >Mature_91_residues ARFSGRQLSPSPSYDPEEWQCMDEGTLKSSRSGAVCMTCNHFRYAVGKHCQTLLTCPIHQRLIPQGQHLNCKCHQWIITR ELEVGWAPEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10487; Mature: 10356
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFSGRQLSPSPSYDPEEWQCMDEGTLKSSRSGAVCMTCNHFRYAVGKHCQTLLTCPIH CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCH QRLIPQGQHLNCKCHQWIITRELEVGWAPEVA HHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure ARFSGRQLSPSPSYDPEEWQCMDEGTLKSSRSGAVCMTCNHFRYAVGKHCQTLLTCPIH CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCH QRLIPQGQHLNCKCHQWIITRELEVGWAPEVA HHHCCCCCCCCCEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA