| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is menC [H]
Identifier: 124024421
GI number: 124024421
Start: 2407407
End: 2408375
Strand: Reverse
Name: menC [H]
Synonym: P9303_27331
Alternate gene names: 124024421
Gene position: 2408375-2407407 (Counterclockwise)
Preceding gene: 124024422
Following gene: 124024420
Centisome position: 89.78
GC content: 59.03
Gene sequence:
>969_bases ATGGCTCTCAAGTTTCAGTGCAAACCGTTTTCATTTCGTTTGAGTCGGGTGTTGCAGACGGCTCAGGGGGTTGTTGAAGA ACGGCAGGGTTGGTTGCTGAGATTGGAGGATGCCGCGGGTCGTTGTGGTTGGGGGGAGGTGGCTCCGATGGATGCGGCTG GTTTAAAGGCCTGCGGAGATTGTTTGGTCAAGCTGCGCTTGGCACCAACGCGTTTGGAGTTGGAGGATGGAATGGCGTTT TGGCCTGCGCCTTTGGCTTTTGGCGTGGGTGCAGCTCTGGCGGAATTGGATGGCCTCGTGGGGTCTGTGACAACAGGCGG TTGGCTTGCGGCGCCTGCCTCTGCTGTGTTGTTGCCGGCGGGGCAGGCTCTTTTGAAGGCTTTGGATTCCATGCTTGAGA TGGATCCCTCAGCCGCTGATCCCTTCACCGTGAAGTGGAAGGTGGCCGTCGCTCCAGATGCACTGGAGCGGCGCCTCTTG TTGCAATTGTTGGAGCGGCTGCCAGACCATGCGCGCTTCAGGCTTGATGGCAATGGCGGTTGGGATCGCAGTGTGGTCAG CTGGTGGGTGGAGCGATGTCTGCAGGATCCGAGGCTGGAATGGTTGGAACAACCTTTGCCTGCTAGTGATCTTGAGGGGT TAAGAGCTTTGGCTCAACAGGTTCCTGTGGCTCTTGATGAGTCGCTTGTGCTTGAGCCATCACTGCGAGAGTCATGGTCT GGCTGGCAGGTGCGGCGTCCGCTCTTAGACGGTGATCCAAGACCTCTGCTGAGGGTGCTGCAGGAGGGTGTGGGCTACCG GATGTTGAGCACGGCCTTTGAAACCGGCATTGGTCGGCGTTGGCTCCACCATCTCGCTGCTTTGCAGCATCAGGGCCCTA CACCAGTGGCTCCTGGCCTGGCCCCGGGTTGGTGCCCTGATGGACCTTTATTTAGCGCTGATCCCGAAGTGGTCTGGGCG GCGGCATGA
Upstream 100 bases:
>100_bases TTGGCATTGCGCTTTCAGGCGCTCAATGGCTTGGGGTTGAGCTTGGGCCTAGCGCTAGCGCCTTACTTGGGCTTTGCGAT GTCTAGCGCAGGTTGAGTTG
Downstream 100 bases:
>100_bases GGGGGTTGGTTGCCCTGCGTTGCAATCCCGCTCAGGCTGAGCAAAGGGCCTTGCAGCTTGCTCAGGCCTTGGAGCAAGGC GATTGGGTGCAACTGCTGCC
Product: O-succinylbenzoate synthase
Products: NA
Alternate protein names: OSB synthase; OSBS; 4-(2'-carboxyphenyl)-4-oxybutyric acid synthase; o-succinylbenzoic acid synthase [H]
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MALKFQCKPFSFRLSRVLQTAQGVVEERQGWLLRLEDAAGRCGWGEVAPMDAAGLKACGDCLVKLRLAPTRLELEDGMAF WPAPLAFGVGAALAELDGLVGSVTTGGWLAAPASAVLLPAGQALLKALDSMLEMDPSAADPFTVKWKVAVAPDALERRLL LQLLERLPDHARFRLDGNGGWDRSVVSWWVERCLQDPRLEWLEQPLPASDLEGLRALAQQVPVALDESLVLEPSLRESWS GWQVRRPLLDGDPRPLLRVLQEGVGYRMLSTAFETGIGRRWLHHLAALQHQGPTPVAPGLAPGWCPDGPLFSADPEVVWA AA
Sequences:
>Translated_322_residues MALKFQCKPFSFRLSRVLQTAQGVVEERQGWLLRLEDAAGRCGWGEVAPMDAAGLKACGDCLVKLRLAPTRLELEDGMAF WPAPLAFGVGAALAELDGLVGSVTTGGWLAAPASAVLLPAGQALLKALDSMLEMDPSAADPFTVKWKVAVAPDALERRLL LQLLERLPDHARFRLDGNGGWDRSVVSWWVERCLQDPRLEWLEQPLPASDLEGLRALAQQVPVALDESLVLEPSLRESWS GWQVRRPLLDGDPRPLLRVLQEGVGYRMLSTAFETGIGRRWLHHLAALQHQGPTPVAPGLAPGWCPDGPLFSADPEVVWA AA >Mature_321_residues ALKFQCKPFSFRLSRVLQTAQGVVEERQGWLLRLEDAAGRCGWGEVAPMDAAGLKACGDCLVKLRLAPTRLELEDGMAFW PAPLAFGVGAALAELDGLVGSVTTGGWLAAPASAVLLPAGQALLKALDSMLEMDPSAADPFTVKWKVAVAPDALERRLLL QLLERLPDHARFRLDGNGGWDRSVVSWWVERCLQDPRLEWLEQPLPASDLEGLRALAQQVPVALDESLVLEPSLRESWSG WQVRRPLLDGDPRPLLRVLQEGVGYRMLSTAFETGIGRRWLHHLAALQHQGPTPVAPGLAPGWCPDGPLFSADPEVVWAA A
Specific function: Converts SHCHC to OSB [H]
COG id: COG4948
COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mandelate racemase/muconate lactonizing enzyme family. MenC type 1 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013342 - InterPro: IPR001354 - InterPro: IPR010196 [H]
Pfam domain/function: PF01188 MR_MLE [H]
EC number: =4.2.1.113 [H]
Molecular weight: Translated: 35089; Mature: 34958
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKFQCKPFSFRLSRVLQTAQGVVEERQGWLLRLEDAAGRCGWGEVAPMDAAGLKACGD CCCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH CLVKLRLAPTRLELEDGMAFWPAPLAFGVGAALAELDGLVGSVTTGGWLAAPASAVLLPA HHHHHCCCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEECC GQALLKALDSMLEMDPSAADPFTVKWKVAVAPDALERRLLLQLLERLPDHARFRLDGNGG HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCC WDRSVVSWWVERCLQDPRLEWLEQPLPASDLEGLRALAQQVPVALDESLVLEPSLRESWS CCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCEEECCCHHHCCC GWQVRRPLLDGDPRPLLRVLQEGVGYRMLSTAFETGIGRRWLHHLAALQHQGPTPVAPGL CCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCC APGWCPDGPLFSADPEVVWAAA CCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure ALKFQCKPFSFRLSRVLQTAQGVVEERQGWLLRLEDAAGRCGWGEVAPMDAAGLKACGD CCEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH CLVKLRLAPTRLELEDGMAFWPAPLAFGVGAALAELDGLVGSVTTGGWLAAPASAVLLPA HHHHHCCCCCEEECCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEECC GQALLKALDSMLEMDPSAADPFTVKWKVAVAPDALERRLLLQLLERLPDHARFRLDGNGG HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCC WDRSVVSWWVERCLQDPRLEWLEQPLPASDLEGLRALAQQVPVALDESLVLEPSLRESWS CCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCEEECCCHHHCCC GWQVRRPLLDGDPRPLLRVLQEGVGYRMLSTAFETGIGRRWLHHLAALQHQGPTPVAPGL CCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCC APGWCPDGPLFSADPEVVWAAA CCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]