| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is sspA [C]
Identifier: 124024300
GI number: 124024300
Start: 2306162
End: 2306887
Strand: Reverse
Name: sspA [C]
Synonym: P9303_26121
Alternate gene names: 124024300
Gene position: 2306887-2306162 (Counterclockwise)
Preceding gene: 124024307
Following gene: 124024299
Centisome position: 85.99
GC content: 54.68
Gene sequence:
>726_bases ATGATGGAACTGCATCAATTCCGCCATTCCGCCTTCTGTCTCAAGGTGCGGATGGTCTTGCAGGCCAAGGGTTTGACTTA CCAGGTGGTGGAAGTTACCCCCGGGTTAGGACAGCTCAACGTGTTTCGCTTGTCAGGTCAGCGTCAGGTCCCGGTACTTG TCGATGGCGATGTTGTTTTGGCAGATTCCAGCACCATTGCTCGACATCTCGAGGCTAAGCAGCCGGAACCACCCCTCATT CCGGTTGATCCACAGCAGGCCGCGCAGGTGTACTTGATTGAAGATTGGGCTGATACGACATTGGCGCGGGCAGGCCGGTC AGCTTTGTTGCAGGCTGCAGCCTTGGACTCTGAGTTGCGTTTAGCTCTTCTTCCAGAAGATCTGCCAACTCCCTTGCGTC AGGTCATGGGAGATCTCCCGGGGGGGTTGTTGAACGGTGCCTCTGAGATCATTGGCCAGGCAGAGAGGGTTGAGTTATTA AAGAGCCTCGAACAATTGGCTGATTTGATGCAGAAAAGGTCCTGGCTAGTAGGAGATGCGATGAGCTTGGCTGATTTAGC TGTAGCCGCTCAGATTTCTTTAATGCGTTTTCCAGCCTCGGCTGGGGCAGCACTTGCCGGTAGAGGTGTGTTCGGCCTGA GTGATCACCCGCGGCTGCAGCCCTTATTCCACTGGAGGGATCAGCTTGAGTTGTCATTGCTTGAGACGGATGACTCAGCC CGATGA
Upstream 100 bases:
>100_bases TTAACTCTCAGCCGAAAGTGAAATGCGATTATTGCCCCCTTTGCCTTAGCGGGCTTTTGAAGCTGTTAGCTACTCTGCCG TTCTTTTGGCAGAGCAAACG
Downstream 100 bases:
>100_bases GCCTTGCTTGAACACCGATCCAGAAATGGCTGTCTAATGTCTGATCCCTTGATTCGTGATTCTGATCACTACGTCGTTTT GGAGCCTGGCCAGCCTGAGC
Product: glutathione S-transferase
Products: HX; R-S-glutathione
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Zeta Class; Glutathione S-Transferase-Like
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGQAERVELL KSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGRGVFGLSDHPRLQPLFHWRDQLELSLLETDDSA R
Sequences:
>Translated_241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGQAERVELL KSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGRGVFGLSDHPRLQPLFHWRDQLELSLLETDDSA R >Mature_241_residues MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVLADSSTIARHLEAKQPEPPLI PVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELRLALLPEDLPTPLRQVMGDLPGGLLNGASEIIGQAERVELL KSLEQLADLMQKRSWLVGDAMSLADLAVAAQISLMRFPASAGAALAGRGVFGLSDHPRLQPLFHWRDQLELSLLETDDSA R
Specific function: Forms An Equimolar Complex With The RNA Polymerase Holoenzyme (Rnap) But Not With The Core Enzyme. It Is Synthesized Predominantly When Cells Are Exposed To Amino Acid Starvation, At Which Time It Accounts For Over 50% Of The Total Protein Synthesized. It
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1982 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.5.1.18
Molecular weight: Translated: 26252; Mature: 26252
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVL CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCEEE ADSSTIARHLEAKQPEPPLIPVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELR ECCHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCE LALLPEDLPTPLRQVMGDLPGGLLNGASEIIGQAERVELLKSLEQLADLMQKRSWLVGDA EEECCCCCCHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCH MSLADLAVAAQISLMRFPASAGAALAGRGVFGLSDHPRLQPLFHWRDQLELSLLETDDSA HHHHHHHHHHHHHHHCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHCHHEEEEEECCCCC R C >Mature Secondary Structure MMELHQFRHSAFCLKVRMVLQAKGLTYQVVEVTPGLGQLNVFRLSGQRQVPVLVDGDVVL CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCCCEEECCCEEE ADSSTIARHLEAKQPEPPLIPVDPQQAAQVYLIEDWADTTLARAGRSALLQAAALDSELR ECCHHHHHHHHCCCCCCCCCCCCHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCE LALLPEDLPTPLRQVMGDLPGGLLNGASEIIGQAERVELLKSLEQLADLMQKRSWLVGDA EEECCCCCCHHHHHHHHHCCCHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHCCH MSLADLAVAAQISLMRFPASAGAALAGRGVFGLSDHPRLQPLFHWRDQLELSLLETDDSA HHHHHHHHHHHHHHHCCCCCCCCHHHCCCEECCCCCCCCCHHHHHHCHHEEEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA