| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is galM [H]
Identifier: 124024280
GI number: 124024280
Start: 2286272
End: 2287138
Strand: Reverse
Name: galM [H]
Synonym: P9303_25911
Alternate gene names: 124024280
Gene position: 2287138-2286272 (Counterclockwise)
Preceding gene: 124024281
Following gene: 124024279
Centisome position: 85.26
GC content: 49.6
Gene sequence:
>867_bases ATGATTGACGGCCATCATTCTCCTCTTCTCCGCAAGCAGAGTCCCTATCCTCATTGGCAGTATCTGCACCCAGAAAGTGG TGATCGTTTGCGGATTGTGCCTGAGCGAGGTGGTTTAGTCACTGATTGGTGTTGTAACGGCCATGAGCTGCTCTATTTTG ATCAGGAGCGTTTTGCGGATCCAGAGAAAAGTATTCGCGGAGGCATTCCAGTGTTGTTTCCCATCTGCGGAAATCTGCCA GGTGATTTATTACCCTTGCCAAGTGGTGAGTTCATTCTTAAACAGCATGGTTTTGCTAGGGATCAGCCCTGGGAATTGCA GTTATTAGAAGATCACAGTGGCGTGAAGCTTAGCCTTGCTGATAGTGAAGAGACGCGTGCTGTTTATCCATTTGCTTTTT TGCTTGAGATGGTGGTGCGCCCGATTCGCAATGCTTTAGAGATCGAGGTAAATGTGCATAACCGTAGTCAAACTGCGATG CCCTTCAGTTTTGGTTTGCACCCTTATTTCAAGGTGACTGATTTGAGTCAGGTTCGCCTCGAAGGCTTACCAAATTCATG TCTCAATCATTTGCAGATGGCAGAAGCTGAAACTGCTATCCAATTGGCAGCTCTAACTGAGGGGGTGGACTTTTTAACTC GCCCTGAGGGCCCAGTCACCCTTGTGGATGAAGCCTCTTGGAGATCTCTGCAGCTTCAGCATGAGAATCCCATGGACCTC ACTGTGGTGTGGACTGATCCGCCGCGGCAGATGCTATGCCTTGAGCCTTGGACTGGGCCGCGGGAGGCATTGATTAGTGG AGATCGCAAGTTGGAGATCGAAGCTGGTGGCAAGCAACGCCTATGTTGTGGGTATTTCAGCAGCTAG
Upstream 100 bases:
>100_bases CTTTTAAATGCTGGACATTGCCCTCATGATGAGGTGCCTGACTTGGTGAATTCTGAATTGCTGGAGTGGCTAAATGGTTT GAGTATTGCTTGATTTAGGA
Downstream 100 bases:
>100_bases TCAGTAGCAAGAAGATTGGAAGAATGAATACCCAATTGATTAATGAGCTGGCTCTTGGGTTGATTTTGAAATCATAATTG ACCTGACCCTAGAGATGGAA
Product: galactose mutarotase
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MIDGHHSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYFDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSLADSEETRAVYPFAFLLEMVVRPIRNALEIEVNVHNRSQTAM PFSFGLHPYFKVTDLSQVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPEGPVTLVDEASWRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGKQRLCCGYFSS
Sequences:
>Translated_288_residues MIDGHHSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYFDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSLADSEETRAVYPFAFLLEMVVRPIRNALEIEVNVHNRSQTAM PFSFGLHPYFKVTDLSQVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPEGPVTLVDEASWRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGKQRLCCGYFSS >Mature_288_residues MIDGHHSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYFDQERFADPEKSIRGGIPVLFPICGNLP GDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSLADSEETRAVYPFAFLLEMVVRPIRNALEIEVNVHNRSQTAM PFSFGLHPYFKVTDLSQVRLEGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPEGPVTLVDEASWRSLQLQHENPMDL TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGKQRLCCGYFSS
Specific function: Unknown
COG id: COG2017
COG function: function code G; Galactose mutarotase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=196, Percent_Identity=29.5918367346939, Blast_Score=69, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323746, Length=260, Percent_Identity=25.3846153846154, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921284, Length=229, Percent_Identity=28.3842794759825, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 32571; Mature: 32571
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDGHHSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYFDQERFAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECHHHCCC PEKSIRGGIPVLFPICGNLPGDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSLA HHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEC DSEETRAVYPFAFLLEMVVRPIRNALEIEVNVHNRSQTAMPFSFGLHPYFKVTDLSQVRL CCCCCCEECHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCHHHHHC EGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPEGPVTLVDEASWRSLQLQHENPMDL CCCCHHHHHHHHHHHHHHHEEEEHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCEE TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGKQRLCCGYFSS EEEECCCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCCEEEEEECCC >Mature Secondary Structure MIDGHHSPLLRKQSPYPHWQYLHPESGDRLRIVPERGGLVTDWCCNGHELLYFDQERFAD CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECHHHCCC PEKSIRGGIPVLFPICGNLPGDLLPLPSGEFILKQHGFARDQPWELQLLEDHSGVKLSLA HHHHHHCCCCEEEEECCCCCCCEEECCCCCEEEECCCCCCCCCEEEEEEECCCCEEEEEC DSEETRAVYPFAFLLEMVVRPIRNALEIEVNVHNRSQTAMPFSFGLHPYFKVTDLSQVRL CCCCCCEECHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCEECCCCCEEEECCHHHHHC EGLPNSCLNHLQMAEAETAIQLAALTEGVDFLTRPEGPVTLVDEASWRSLQLQHENPMDL CCCCHHHHHHHHHHHHHHHEEEEHHHCCCHHEECCCCCEEEEECCCCCEEEEECCCCCEE TVVWTDPPRQMLCLEPWTGPREALISGDRKLEIEAGGKQRLCCGYFSS EEEECCCCCCEEEECCCCCHHHHHHCCCEEEEEECCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]