| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024278
Identifier: 124024278
GI number: 124024278
Start: 2283886
End: 2285598
Strand: Reverse
Name: 124024278
Synonym: P9303_25891
Alternate gene names: NA
Gene position: 2285598-2283886 (Counterclockwise)
Preceding gene: 124024279
Following gene: 124024277
Centisome position: 85.2
GC content: 39.0
Gene sequence:
>1713_bases ATGAAGACAGGTCATTTGAGACTGCTGAGTTGGCTGTGCGTTATGAATGGCAAGCAAGTAGGAAGGCTTTTTGCAGGCTT AGCAGCTTTGTGGACTACATGGCCAGGCATCTCACAAGGCCTAGGCCTTATTGGTGAAGAGGCAACTCGTGTTGCGATTG CAGCACAAATTGCAGGGACAGGTGATTTGAATCCACACTGGTTTGGGCATCCAGCCACTCTCCTGAATTATATGCTTGCT GGTTTATTTCAAGCATTTGCTTTCATTTCTGGAACAATAGATATACGCCATTTATATACATTAGAACCAGAATCACTTTT TTTAATAGGGAGGCTAGTATCGCGTTTTGCAGCTATTTTTAGCGCTGTCTTATGTTTTGAGGTTGCGTCTAAAATAATGA ATCTGCGCTGGGCTAGTGTAAGCGCTATTTTACTTTCTTTAAACCCTTTATTTGTTATTCATGCACATCGAGCAAGAGCT GACCATGTATTGACATCTGCATTATTGATAGCAACACTATTGCTTATAAATATTCTAGAAAATAAGCAAAAAGGGGCTTG GCGGCTTGCTGCGTTCGCTGGTATTGCGCTTACTTTTAAATATTCTGCGGCCTCAATTCTCCTTTCACTTATAATTGCTT TATTTTACTCTAAAGGATCTTCTCGTCCCTTTCTTATAAGGCTTAATTTTATTATAGTCGTCTTTATTGCGGCTATATTT CTTTCCTCGCCTTATCTTTTTCTCGACTGGAAGTCTGCTTTTGGTGGTCTATATGGCGAAGTGTCAAAGCAGTCTATATG GCAACCTCATCTAAGCGCCATCAAGTTCTCTAAAATCTTGCTTTATAGCCTTTCTTCTTTAGGGCTATTGTCATTAGCAA TTTATTCGATAAGCAGGCTAATAATTATTGCTAAGACTAGAGCAAGAAAGTTGTATTACCCACTGAACAAGCACAGTATT GCGATAAATGCATTGCTATTAATATACTTGCCGTTTATTGCTGGGGGATTTTTTGCAAGTACTTATAACTCAACATGGCT TTCCCCAGCGCTTCCTTTCTTATCGATCCTTCTTGCGTTATCGATTAAAACTTTTTGTAAATTCATGCTAGCCGATGGGA ATATTGTCAAAAAAGCTTTGGGAATTCTTTTTATATTTTCAATTTTTATTGATCAAACCATGAAAATGCGAGGAGTACAT TTAATGCGACAAATGAAAGGCAGCTCTGTGGAAGCTGAAGAGTGGTTGATGAAAAATGTCAACCCTGGGGAATCGGTATT ACTGCTTCAGCCCCGAGAGACGTATGAAGCAGCTGGCTTCCCACGAATATTCAGAACAGGTGCGGATATTTTTATAATAG ATGATAAGAATCATCATTCCCAAGTATGTACGTTAAGCCCTGATGAATACCTGAGAAAAAATCCACAATCACTGCTAATT AATTTGCCATGCCACCCTCGCCCTGTCTTTGTATCTCAGTCTAAGACCAGCATATCTGAGCTTTTGAAAAAATATGACTA TATAGTAACCTCTATGCGTGTTAGCTTGATGGACAGGGAAAAAGTTAAAAACTCTAGTTCTGTTATCCCAGTCATCGAAT TCTTTCCACCTCGTGGAATTGTAAATCTTGTTTATAGCCTCAATCCATTTCCCCAGGGCGATTCTGCTGTATGGAGCTCT ATAAGAATTTATAAAAGAAATAGATCTATATAG
Upstream 100 bases:
>100_bases TCCGGAGGTAAAGCAAAGCCGGGAATAATTTGCAAACAATTTTTACCATTTCTATTAAAGGTGGATTGCTTGATCAGCTT TACAGGCATAGATGATATAA
Downstream 100 bases:
>100_bases TATAAAGTTAGTAATGTTCATGCCTCTATGTTGCCAACATTCTCTTGGAAGGTTCGCCTCGAAGGCTTACCAAATTCATG TCTCAATCATTTGCAGATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MKTGHLRLLSWLCVMNGKQVGRLFAGLAALWTTWPGISQGLGLIGEEATRVAIAAQIAGTGDLNPHWFGHPATLLNYMLA GLFQAFAFISGTIDIRHLYTLEPESLFLIGRLVSRFAAIFSAVLCFEVASKIMNLRWASVSAILLSLNPLFVIHAHRARA DHVLTSALLIATLLLINILENKQKGAWRLAAFAGIALTFKYSAASILLSLIIALFYSKGSSRPFLIRLNFIIVVFIAAIF LSSPYLFLDWKSAFGGLYGEVSKQSIWQPHLSAIKFSKILLYSLSSLGLLSLAIYSISRLIIIAKTRARKLYYPLNKHSI AINALLLIYLPFIAGGFFASTYNSTWLSPALPFLSILLALSIKTFCKFMLADGNIVKKALGILFIFSIFIDQTMKMRGVH LMRQMKGSSVEAEEWLMKNVNPGESVLLLQPRETYEAAGFPRIFRTGADIFIIDDKNHHSQVCTLSPDEYLRKNPQSLLI NLPCHPRPVFVSQSKTSISELLKKYDYIVTSMRVSLMDREKVKNSSSVIPVIEFFPPRGIVNLVYSLNPFPQGDSAVWSS IRIYKRNRSI
Sequences:
>Translated_570_residues MKTGHLRLLSWLCVMNGKQVGRLFAGLAALWTTWPGISQGLGLIGEEATRVAIAAQIAGTGDLNPHWFGHPATLLNYMLA GLFQAFAFISGTIDIRHLYTLEPESLFLIGRLVSRFAAIFSAVLCFEVASKIMNLRWASVSAILLSLNPLFVIHAHRARA DHVLTSALLIATLLLINILENKQKGAWRLAAFAGIALTFKYSAASILLSLIIALFYSKGSSRPFLIRLNFIIVVFIAAIF LSSPYLFLDWKSAFGGLYGEVSKQSIWQPHLSAIKFSKILLYSLSSLGLLSLAIYSISRLIIIAKTRARKLYYPLNKHSI AINALLLIYLPFIAGGFFASTYNSTWLSPALPFLSILLALSIKTFCKFMLADGNIVKKALGILFIFSIFIDQTMKMRGVH LMRQMKGSSVEAEEWLMKNVNPGESVLLLQPRETYEAAGFPRIFRTGADIFIIDDKNHHSQVCTLSPDEYLRKNPQSLLI NLPCHPRPVFVSQSKTSISELLKKYDYIVTSMRVSLMDREKVKNSSSVIPVIEFFPPRGIVNLVYSLNPFPQGDSAVWSS IRIYKRNRSI >Mature_570_residues MKTGHLRLLSWLCVMNGKQVGRLFAGLAALWTTWPGISQGLGLIGEEATRVAIAAQIAGTGDLNPHWFGHPATLLNYMLA GLFQAFAFISGTIDIRHLYTLEPESLFLIGRLVSRFAAIFSAVLCFEVASKIMNLRWASVSAILLSLNPLFVIHAHRARA DHVLTSALLIATLLLINILENKQKGAWRLAAFAGIALTFKYSAASILLSLIIALFYSKGSSRPFLIRLNFIIVVFIAAIF LSSPYLFLDWKSAFGGLYGEVSKQSIWQPHLSAIKFSKILLYSLSSLGLLSLAIYSISRLIIIAKTRARKLYYPLNKHSI AINALLLIYLPFIAGGFFASTYNSTWLSPALPFLSILLALSIKTFCKFMLADGNIVKKALGILFIFSIFIDQTMKMRGVH LMRQMKGSSVEAEEWLMKNVNPGESVLLLQPRETYEAAGFPRIFRTGADIFIIDDKNHHSQVCTLSPDEYLRKNPQSLLI NLPCHPRPVFVSQSKTSISELLKKYDYIVTSMRVSLMDREKVKNSSSVIPVIEFFPPRGIVNLVYSLNPFPQGDSAVWSS IRIYKRNRSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63617; Mature: 63617
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTGHLRLLSWLCVMNGKQVGRLFAGLAALWTTWPGISQGLGLIGEEATRVAIAAQIAGT CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEEEEEEECCC GDLNPHWFGHPATLLNYMLAGLFQAFAFISGTIDIRHLYTLEPESLFLIGRLVSRFAAIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHH SAVLCFEVASKIMNLRWASVSAILLSLNPLFVIHAHRARADHVLTSALLIATLLLINILE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH NKQKGAWRLAAFAGIALTFKYSAASILLSLIIALFYSKGSSRPFLIRLNFIIVVFIAAIF CCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH LSSPYLFLDWKSAFGGLYGEVSKQSIWQPHLSAIKFSKILLYSLSSLGLLSLAIYSISRL HCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIAKTRARKLYYPLNKHSIAINALLLIYLPFIAGGFFASTYNSTWLSPALPFLSILLAL EEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHH SIKTFCKFMLADGNIVKKALGILFIFSIFIDQTMKMRGVHLMRQMKGSSVEAEEWLMKNV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC NPGESVLLLQPRETYEAAGFPRIFRTGADIFIIDDKNHHSQVCTLSPDEYLRKNPQSLLI CCCCCEEEECCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCEEE NLPCHPRPVFVSQSKTSISELLKKYDYIVTSMRVSLMDREKVKNSSSVIPVIEFFPPRGI ECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH VNLVYSLNPFPQGDSAVWSSIRIYKRNRSI HHHHHCCCCCCCCCHHHHHHHHEEECCCCC >Mature Secondary Structure MKTGHLRLLSWLCVMNGKQVGRLFAGLAALWTTWPGISQGLGLIGEEATRVAIAAQIAGT CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEEEEEEECCC GDLNPHWFGHPATLLNYMLAGLFQAFAFISGTIDIRHLYTLEPESLFLIGRLVSRFAAIF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHHHHHH SAVLCFEVASKIMNLRWASVSAILLSLNPLFVIHAHRARADHVLTSALLIATLLLINILE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHH NKQKGAWRLAAFAGIALTFKYSAASILLSLIIALFYSKGSSRPFLIRLNFIIVVFIAAIF CCCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHH LSSPYLFLDWKSAFGGLYGEVSKQSIWQPHLSAIKFSKILLYSLSSLGLLSLAIYSISRL HCCCEEEEECHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIAKTRARKLYYPLNKHSIAINALLLIYLPFIAGGFFASTYNSTWLSPALPFLSILLAL EEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHH SIKTFCKFMLADGNIVKKALGILFIFSIFIDQTMKMRGVHLMRQMKGSSVEAEEWLMKNV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC NPGESVLLLQPRETYEAAGFPRIFRTGADIFIIDDKNHHSQVCTLSPDEYLRKNPQSLLI CCCCCEEEECCHHHHHHCCCCHHHHCCCCEEEEECCCCCCCEEEECCHHHHHCCCCCEEE NLPCHPRPVFVSQSKTSISELLKKYDYIVTSMRVSLMDREKVKNSSSVIPVIEFFPPRGI ECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCH VNLVYSLNPFPQGDSAVWSSIRIYKRNRSI HHHHHCCCCCCCCCHHHHHHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA