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The map label for this gene is yfdH [C]

Identifier: 124024263

GI number: 124024263

Start: 2267783

End: 2268757

Strand: Reverse

Name: yfdH [C]

Synonym: P9303_25741

Alternate gene names: 124024263

Gene position: 2268757-2267783 (Counterclockwise)

Preceding gene: 124024264

Following gene: 124024258

Centisome position: 84.57

GC content: 48.72

Gene sequence:

>975_bases
ATGGAGAGGTCATCAATCTCAGAGCGTTTGCCTGGTCAGATCTGGGTAGTAGCTGCCTGTTTCAATGAAGAGGTTGTGAT
CTGTCAGTTCATCGAACGAGTACTTGCCTTGCCGGCAGTTAGTCATTTGTTGCTGGTGGATGATGGCTCACGGGACGGCA
CGGTGGCTCAGATCCGCTCATGGCAGCAGCGATTTGTTGGTTCTAAGGCTTCTGCTCCAGTCACTTTGTTGGAGCTCACA
AGGAACTTTGGTAAAGAATCTGCAATGCTGGCCGGCTTGGATTATGCCCAGGGCCACTGCGATGCTGTGGTGCTGATTGA
TTCAGATCTTCAGCATCCGCCAGAGTTGATTACGCAGATGGCTCAGGCTTGGCGTGATGGTGCTGAGGTTGTTACTGCAG
TCCGTGACGATCGTGATCAGGAATCAAGGTTGAAAGTAACAACTTCTTCCTGGTTCTACAGGGTTTTCAACCGGGTAGTG
GATTCCATTCAACTGATTGATGGAGCAGGAGATTTTCGTTTGCTCAGTGCACCAGTTGTGCAAGCCCTCACTCAAATGCG
TGAATTCAGCCGTTTCTCCAAAGGTTTACTTCCTTGGACCGGATATCGCAGTGTCGAGCTTAGTTACAGCAGGGTGAAAC
GAATGGGAGGTCGTAGCTCCTGGAGCCCCCTGAAGCTATGGAGCTATGCCCTTGATGGCATCTTTTCCTTCTCAGTGATT
CCTCTAAAGATTTGGAGTTTTTTGGGCCTTGTAGTTTCCTTAATTAGTTTGCTGTACGCCGCAGTTATCGTTTTGATCAC
GATTTTTAATGGAGTTGATCTTCCTGGCTATGCCTCGCTGATTGTGGCGGTTCTGTTTTTGGGGGGTATTCAATTGATTG
GTATCGGTGTACTTGGTGAGTACATCGGTCGGATCTATGTGGATACCAAAGCCAGGCCACACTATTTCATTAGGGCCATT
CACGGTTCACTTTGA

Upstream 100 bases:

>100_bases
GCCTTGGTGGTGGTCCTGACGACCAGCCTTAAGCGACTTAGCTTGAGCTTGCCAAATTCTTCTCGAATTCAGTAGTGCTG
TTCTACGTCCATAGTGAGTG

Downstream 100 bases:

>100_bases
GTGGAGGCACTGGCTTGTAGTTGTTTGACTGCTTGCCACTCCAGTTGACGCCATGAGGATGAGAAAAATGTACGAGATAA
AGGGAAATCTGTGAGGCCCT

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MERSSISERLPGQIWVVAACFNEEVVICQFIERVLALPAVSHLLLVDDGSRDGTVAQIRSWQQRFVGSKASAPVTLLELT
RNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQMAQAWRDGAEVVTAVRDDRDQESRLKVTTSSWFYRVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL

Sequences:

>Translated_324_residues
MERSSISERLPGQIWVVAACFNEEVVICQFIERVLALPAVSHLLLVDDGSRDGTVAQIRSWQQRFVGSKASAPVTLLELT
RNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQMAQAWRDGAEVVTAVRDDRDQESRLKVTTSSWFYRVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL
>Mature_324_residues
MERSSISERLPGQIWVVAACFNEEVVICQFIERVLALPAVSHLLLVDDGSRDGTVAQIRSWQQRFVGSKASAPVTLLELT
RNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQMAQAWRDGAEVVTAVRDDRDQESRLKVTTSSWFYRVFNRVV
DSIQLIDGAGDFRLLSAPVVQALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGEYIGRIYVDTKARPHYFIRAI
HGSL

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=314, Percent_Identity=42.3566878980892, Blast_Score=251, Evalue=3e-68,
Organism=Escherichia coli, GI1788588, Length=321, Percent_Identity=30.8411214953271, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35985; Mature: 35985

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSSISERLPGQIWVVAACFNEEVVICQFIERVLALPAVSHLLLVDDGSRDGTVAQIRS
CCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH
WQQRFVGSKASAPVTLLELTRNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQM
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AQAWRDGAEVVTAVRDDRDQESRLKVTTSSWFYRVFNRVVDSIQLIDGAGDFRLLSAPVV
HHHHHCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
QALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
HHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
YIGRIYVDTKARPHYFIRAIHGSL
HHCEEEEECCCCCHHHHHHHCCCC
>Mature Secondary Structure
MERSSISERLPGQIWVVAACFNEEVVICQFIERVLALPAVSHLLLVDDGSRDGTVAQIRS
CCCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH
WQQRFVGSKASAPVTLLELTRNFGKESAMLAGLDYAQGHCDAVVLIDSDLQHPPELITQM
HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHH
AQAWRDGAEVVTAVRDDRDQESRLKVTTSSWFYRVFNRVVDSIQLIDGAGDFRLLSAPVV
HHHHHCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH
QALTQMREFSRFSKGLLPWTGYRSVELSYSRVKRMGGRSSWSPLKLWSYALDGIFSFSVI
HHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
PLKIWSFLGLVVSLISLLYAAVIVLITIFNGVDLPGYASLIVAVLFLGGIQLIGIGVLGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
YIGRIYVDTKARPHYFIRAIHGSL
HHCEEEEECCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]