| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024210
Identifier: 124024210
GI number: 124024210
Start: 2218902
End: 2219777
Strand: Reverse
Name: 124024210
Synonym: P9303_25211
Alternate gene names: NA
Gene position: 2219777-2218902 (Counterclockwise)
Preceding gene: 124024211
Following gene: 124024208
Centisome position: 82.74
GC content: 49.66
Gene sequence:
>876_bases ATGTCTATGCGACGCAGCGTTCGTGATGCGATTGTCGGATTCTCCATCGTTGGAGGAGTGGTTGCCTTTGCAGGAACTTT GCTTTGGTTAAGGGGTGTGCGTCTTGGCGCCAAGGTTTGGAGCATCAAGGTGAACTTCCCCGATGCAACTGGTCTTGCTG AACGTTCCCCCGTGACTTATCGCGGCATCTTGGTGGGCACTGTCGTCAAAATCGATGTGACTTCCCAAGCTGTGCGGGCC ACCCTTGAAATCAATAAGGGTGATCTGCGCCTTTCCACGCCGGTTGTCGCCAAGGTGGCTTCTAGTTCATTGCTTGGGGG TGATTCTCAGGTGTCGTTGGTGAGTCTTGGCAAGCCGTTGTCTGCTAATGCTCCCCTGCCTAGATCAATGGATTGTTCTG GCAGCAAGGTGTTGTGTAACGGGGCAACGATTGTGGGTGAGCCTCCGGTGAGTATCTCTTCAGTGACAGAGACACTTGAG CGCATTCTGCAAGAGGCAGAGAAGCAGAAGTTGGTCACGTATTTGGTTGATTCCACCAAGCAGATTGAAAGCACTGCCGA AGATGTCTCCAAATTAATGCGTCAGCTCAAGGATGAGGTAGCTCGAGCTGAACCGATGATTACCAATCTCAATCTGGCAA CCGGCCATATCAACAATGTGGTTGAAGCATTCGATAACCCGAAAACAGTTAATGATCTCAAGCAGACTGTGAGTTACGCT CGCTCGCTTACTAAAAAGTTTGATGCAGTGGGTGGAGATGTGGAAAAGCTTACGAATGATCCGCAATTCATGAATTCTTT GCGTAGCGTTACGATTGGCCTTGGTGAGTTTTTTAATGAGCTTTACCCGGCCCAAACTAGTGGTAATAGACCTTGA
Upstream 100 bases:
>100_bases GGGCTGGCTCTATAGAAGACTTCGGTAAGACGGATAATCCTTATGTTCAACAGTTCCGTACCGGTAGTCTTCGCGGGCCA ATGCAACCTGAAGAGCATTG
Downstream 100 bases:
>100_bases AGTATTAAGCTCTTTAGAGCCTATATGCGTGATCAATTAATAGGCCTAAATATTATTTAACCTGGTCTATTGCTTCCATT GCGATGGCGGCAATTGCTTG
Product: ABC transporter
Products: NA
Alternate protein names: Mce Related Protein; Mammalian Cell Entry Related Domain Protein; ABC-Type Transport System Periplasmic Component; Mammalian Cell Entry Related Domain-Containing Protein
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSMRRSVRDAIVGFSIVGGVVAFAGTLLWLRGVRLGAKVWSIKVNFPDATGLAERSPVTYRGILVGTVVKIDVTSQAVRA TLEINKGDLRLSTPVVAKVASSSLLGGDSQVSLVSLGKPLSANAPLPRSMDCSGSKVLCNGATIVGEPPVSISSVTETLE RILQEAEKQKLVTYLVDSTKQIESTAEDVSKLMRQLKDEVARAEPMITNLNLATGHINNVVEAFDNPKTVNDLKQTVSYA RSLTKKFDAVGGDVEKLTNDPQFMNSLRSVTIGLGEFFNELYPAQTSGNRP
Sequences:
>Translated_291_residues MSMRRSVRDAIVGFSIVGGVVAFAGTLLWLRGVRLGAKVWSIKVNFPDATGLAERSPVTYRGILVGTVVKIDVTSQAVRA TLEINKGDLRLSTPVVAKVASSSLLGGDSQVSLVSLGKPLSANAPLPRSMDCSGSKVLCNGATIVGEPPVSISSVTETLE RILQEAEKQKLVTYLVDSTKQIESTAEDVSKLMRQLKDEVARAEPMITNLNLATGHINNVVEAFDNPKTVNDLKQTVSYA RSLTKKFDAVGGDVEKLTNDPQFMNSLRSVTIGLGEFFNELYPAQTSGNRP >Mature_290_residues SMRRSVRDAIVGFSIVGGVVAFAGTLLWLRGVRLGAKVWSIKVNFPDATGLAERSPVTYRGILVGTVVKIDVTSQAVRAT LEINKGDLRLSTPVVAKVASSSLLGGDSQVSLVSLGKPLSANAPLPRSMDCSGSKVLCNGATIVGEPPVSISSVTETLER ILQEAEKQKLVTYLVDSTKQIESTAEDVSKLMRQLKDEVARAEPMITNLNLATGHINNVVEAFDNPKTVNDLKQTVSYAR SLTKKFDAVGGDVEKLTNDPQFMNSLRSVTIGLGEFFNELYPAQTSGNRP
Specific function: Unknown
COG id: COG1463
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31207; Mature: 31076
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMRRSVRDAIVGFSIVGGVVAFAGTLLWLRGVRLGAKVWSIKVNFPDATGLAERSPVTY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEE RGILVGTVVKIDVTSQAVRATLEINKGDLRLSTPVVAKVASSSLLGGDSQVSLVSLGKPL EEEEEEEEEEEEECHHHHHEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCCC SANAPLPRSMDCSGSKVLCNGATIVGEPPVSISSVTETLERILQEAEKQKLVTYLVDSTK CCCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH QIESTAEDVSKLMRQLKDEVARAEPMITNLNLATGHINNVVEAFDNPKTVNDLKQTVSYA HHHHHHHHHHHHHHHHHHHHHHCCCCCEECEECHHHHHHHHHHHCCCCHHHHHHHHHHHH RSLTKKFDAVGGDVEKLTNDPQFMNSLRSVTIGLGEFFNELYPAQTSGNRP HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SMRRSVRDAIVGFSIVGGVVAFAGTLLWLRGVRLGAKVWSIKVNFPDATGLAERSPVTY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCEE RGILVGTVVKIDVTSQAVRATLEINKGDLRLSTPVVAKVASSSLLGGDSQVSLVSLGKPL EEEEEEEEEEEEECHHHHHEEEEECCCCEEECCHHHHHHHHHHHCCCCCCEEEEECCCCC SANAPLPRSMDCSGSKVLCNGATIVGEPPVSISSVTETLERILQEAEKQKLVTYLVDSTK CCCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHH QIESTAEDVSKLMRQLKDEVARAEPMITNLNLATGHINNVVEAFDNPKTVNDLKQTVSYA HHHHHHHHHHHHHHHHHHHHHHCCCCCEECEECHHHHHHHHHHHCCCCHHHHHHHHHHHH RSLTKKFDAVGGDVEKLTNDPQFMNSLRSVTIGLGEFFNELYPAQTSGNRP HHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA