| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024156
Identifier: 124024156
GI number: 124024156
Start: 2168247
End: 2168555
Strand: Reverse
Name: 124024156
Synonym: P9303_24671
Alternate gene names: NA
Gene position: 2168555-2168247 (Counterclockwise)
Preceding gene: 124024157
Following gene: 124024153
Centisome position: 80.84
GC content: 54.05
Gene sequence:
>309_bases TTGCGCGGGGCAGACCTCCGTGATGCTCATTTGATTGGTGTAGACCTTCGCGATGCTGATCTGCGGGGTGCTCGTCTTGA AGGCGCGAATCTTGAGGGTGCTGATCTAAGTGGGGCTCGCTTGGATGATGCTCAGCTCAATGGGGCCATGCTTACGAATA CTGAGTTGAGTGGAACAGACTTGCGGCGTGCAGACTTACGTGAGGCTGTGGTGATCAATGCTTACTCGCCAGATGTGCGT ACGGAAGGAATGCAGTTCGCCGGTGCTGATTTAACCGGCAGTCATTTGATTTATGGGGGTGCTCCTTGA
Upstream 100 bases:
>100_bases TCCTACAGCATTTGCGGCGCCAGTTGTGTCGCTCAATGTTGAGCCTTTTACAAGACAGATGGAGCAGTTGCACCAATTCG GAGCGTGTAGGAGTTGTGAT
Downstream 100 bases:
>100_bases TCAAGTGAATTAGAAGAGGTGCTCTTCAAATTGATCGAATTGATTGATGGGTGTATAGGGAACAAAAGGTACGCCGGTGC CGGTGAAGTTGAAATCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MRGADLRDAHLIGVDLRDADLRGARLEGANLEGADLSGARLDDAQLNGAMLTNTELSGTDLRRADLREAVVINAYSPDVR TEGMQFAGADLTGSHLIYGGAP
Sequences:
>Translated_102_residues MRGADLRDAHLIGVDLRDADLRGARLEGANLEGADLSGARLDDAQLNGAMLTNTELSGTDLRRADLREAVVINAYSPDVR TEGMQFAGADLTGSHLIYGGAP >Mature_102_residues MRGADLRDAHLIGVDLRDADLRGARLEGANLEGADLSGARLDDAQLNGAMLTNTELSGTDLRRADLREAVVINAYSPDVR TEGMQFAGADLTGSHLIYGGAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10750; Mature: 10750
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGADLRDAHLIGVDLRDADLRGARLEGANLEGADLSGARLDDAQLNGAMLTNTELSGTD CCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC LRRADLREAVVINAYSPDVRTEGMQFAGADLTGSHLIYGGAP CCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCC >Mature Secondary Structure MRGADLRDAHLIGVDLRDADLRGARLEGANLEGADLSGARLDDAQLNGAMLTNTELSGTD CCCCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC LRRADLREAVVINAYSPDVRTEGMQFAGADLTGSHLIYGGAP CCCCCCCEEEEEECCCCCCCCCCEEEECCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA