| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024140
Identifier: 124024140
GI number: 124024140
Start: 2154869
End: 2155261
Strand: Reverse
Name: 124024140
Synonym: P9303_24511
Alternate gene names: NA
Gene position: 2155261-2154869 (Counterclockwise)
Preceding gene: 124024141
Following gene: 124024139
Centisome position: 80.34
GC content: 41.48
Gene sequence:
>393_bases TTGCAACTTAATTCCATGAGACGGACTTCTTTGCTGTTCAGGTTTTCTGCGGGTTTTGAAATTCTTGGTGGGATTTTTGC TCTTGTTCTGCCTATTAAATTTTGTTCACTACTTTTTGGTTATGCGCTAGTCACTGAACAGGTAGGTATTGCAAGATTAT TTGCATTGGCAATCATTGCTCTTGGCGGGGCGTGCTGGGAAGCATCAAGCCATGCCCCGATGCAAAATCCGAGAAGATCT CTTTGTTATTACAATATTGCTGTTGGCCTTTTGTTAACGTCTATTGGTGTGAGCCAAGATGTAATTGGTGTTCTTTTGTG GCCAGGAGTATTTATTCATCTTGCAATAGGGATTTTGCTTTTGCCTGGCCTTAGAAAGCTAGAGATTTCCTAG
Upstream 100 bases:
>100_bases CAACTCTTTTGTCTTTTGGGTGAGTGCTGTCGTTCTCGCCGCTTGTGTAGGAGTTTTGGTGTTCAGTATTAGCCTGCTTC AAGGTTAAAGAAGAGATTTT
Downstream 100 bases:
>100_bases GTAAGGGAATTGATGCTATTGATTGGGTTAAATGCCTAAATGGTTTATTTACAAACCAGTCCTAGATATAAGAAGAATTT GGCTAGACAAAGAAACTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MQLNSMRRTSLLFRFSAGFEILGGIFALVLPIKFCSLLFGYALVTEQVGIARLFALAIIALGGACWEASSHAPMQNPRRS LCYYNIAVGLLLTSIGVSQDVIGVLLWPGVFIHLAIGILLLPGLRKLEIS
Sequences:
>Translated_130_residues MQLNSMRRTSLLFRFSAGFEILGGIFALVLPIKFCSLLFGYALVTEQVGIARLFALAIIALGGACWEASSHAPMQNPRRS LCYYNIAVGLLLTSIGVSQDVIGVLLWPGVFIHLAIGILLLPGLRKLEIS >Mature_130_residues MQLNSMRRTSLLFRFSAGFEILGGIFALVLPIKFCSLLFGYALVTEQVGIARLFALAIIALGGACWEASSHAPMQNPRRS LCYYNIAVGLLLTSIGVSQDVIGVLLWPGVFIHLAIGILLLPGLRKLEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14105; Mature: 14105
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLNSMRRTSLLFRFSAGFEILGGIFALVLPIKFCSLLFGYALVTEQVGIARLFALAIIA CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGACWEASSHAPMQNPRRSLCYYNIAVGLLLTSIGVSQDVIGVLLWPGVFIHLAIGILL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LPGLRKLEIS HCCCHHCCCC >Mature Secondary Structure MQLNSMRRTSLLFRFSAGFEILGGIFALVLPIKFCSLLFGYALVTEQVGIARLFALAIIA CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGGACWEASSHAPMQNPRRSLCYYNIAVGLLLTSIGVSQDVIGVLLWPGVFIHLAIGILL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LPGLRKLEIS HCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA