| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024089
Identifier: 124024089
GI number: 124024089
Start: 2111100
End: 2112863
Strand: Reverse
Name: 124024089
Synonym: P9303_23981
Alternate gene names: NA
Gene position: 2112863-2111100 (Counterclockwise)
Preceding gene: 124024090
Following gene: 124024088
Centisome position: 78.76
GC content: 45.12
Gene sequence:
>1764_bases ATGCAGCAGCTGCAGTCAGCAGTGCAGGCATATCAGGGTAGAGATCTTGACGATGCTGAGGCAATTTTCAAGCAGATTCT CGCTGTAAATCCAAAGGAGCCAACTGCGCTGCATCTCCTCGGTTGTATTTACAAAGATCGTGGACAACTCCAGCAGGCTG TTGAGTTAATCCAGGCATCTATTCGAGAAGATGAGAGTAATCCAATTCCATTCTTTAATCTTGGCAAGATCCTTGCTATC GCTGGTCAGCATGAGAATGCAGTGGGCGTCTTCCAGGAGTCATTGAAGAGAAACCAGCAGATCCCTGAAACGTGGTTTTG CTTTGCCAATGCTCTGAGGGAGATTGGGAAAACAGAGGAAGCAAAGCGGGCATATCGAAATGCACTGCAATTAAATCCTG CACATGCTGGAGCAGCAGGAAATTTAGGAGCACTGCTCACCGATGATGGTGAGTTGGATGAGGCTGAAAAGGTATTGAGA AGGGCATTAGCGAGTAATCCTGAGGATATAAATTGCCTTGTAAATCTAGGCATTTTATTGAAGGAAGAGGGAGAGTTTGA AGAAGCGATCGCAAGTTATCGGAAAGCGATTGAGGTGAAGCCTGATTTTGAAGATGCGTATTTTAATTTAGGCCTTCTAT TGAAAGAAGTGGAGGGGAAGGTAGAGGAGGCGAGCGTGTTTTTTCAGAAGGCGATTGCCATTTATCGGAAAGCGATTGAA GTGAAACCCGATTCTGGGCAAGCGTACGTGAATTTAGTGACTGTATTGAATAAGGATGGTCGGCTTGATGAGGCTCGCGT TGCCATTGAATGTCTTTTAAGCCTCAAGCCGCCAGATGATCGACAGTCGCTTGATTTTTCTTGCGGCCAGCTCGTTCTCG ATTGGTATCGTATAAGAGTGAATGGTCTCTTCTGGGATGTCGAATTAAAAGGTTTTTTGGCGAGTAATTCGCACCTCTCT GCGGTCAGGTCCACAGATGCGATGTGCTTTCCCCCTCTTTTCCTAAAGGATGGTAAAGAAGATGCATGTAGAAGAGAATT TTATGAAAAAGGATTTGTTACCCAAAGAGGGGTCATTAGTGGCTCGGACTGTGCGGCACTTGTTGATGAATTACCCGGCA TCGGCTTGATGAGCGAGAGGCTAATTCAAATTGTTTTGGAGAGAAACATTTTGAGGTCTGTTGTGAAATCTGCTTTTGAG CTTTCGGGATTCCCTCATCTTATATGGAATTGCATTTGCTTTGCTAAAGGGCCAGATGACAAGGCTCATTCGGACGATTG GCATCTTGACAATCATTACAATATTTGGACGTCAAAGTTGATAGTCTATCTCAACTCTCAGAGTGACGAGCTGGGTGCTA CTGAGTTAGTTGAAGCTTCTTTGTCGAAAGAGCTTTCTGAAAAATCAGATTATACGGGGCTTGTGACTGATAGAGATTTC TACATTCAGTGTCTTTCTGGCTTAGTTGATGAACTCGGGCTTGAGGCTGAGTCACTTGATCCGCCTCATTACACCTTTTC ACCTGATGAGGCCGGCACGGGTGTTTGGTTTTGTCCTGCACGAGTGCTGCATCGTGGAGTTAGTCCTAAGAAAGGACTTC GCCATGTGCTTACGTTTTCCTTGACACCACTTCCTAGAGATTGTCAGTGGTCCATGGAGCAGTGCGTCGAGAAGTCAGTA GAGATATTGAGGGACAAGATTAAGCAAGGTATGGAAGAAATTGATATCAACCCCTTTTGGTCTGTATCAAATAGGTCTGT ATAG
Upstream 100 bases:
>100_bases GATCGTAAGGGTCACTAGAGACCATTTGGCAGTGAAGAGGGGTAAGAAGTTGCCTTAAAATTGCATAAGCGAGAGATGCC TGGTGAATCAAGAGGAGATC
Downstream 100 bases:
>100_bases GCAGAAACCAAGCCACTTCTGCGAAGCCAGGTATTACGCCACTGCCATCGCACCGAAAGACCACAGGCGAGTGCTGAATA CATTGCGTTATATCCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MQQLQSAVQAYQGRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKEVEGKVEEASVFFQKAIAIYRKAIE VKPDSGQAYVNLVTVLNKDGRLDEARVAIECLLSLKPPDDRQSLDFSCGQLVLDWYRIRVNGLFWDVELKGFLASNSHLS AVRSTDAMCFPPLFLKDGKEDACRREFYEKGFVTQRGVISGSDCAALVDELPGIGLMSERLIQIVLERNILRSVVKSAFE LSGFPHLIWNCICFAKGPDDKAHSDDWHLDNHYNIWTSKLIVYLNSQSDELGATELVEASLSKELSEKSDYTGLVTDRDF YIQCLSGLVDELGLEAESLDPPHYTFSPDEAGTGVWFCPARVLHRGVSPKKGLRHVLTFSLTPLPRDCQWSMEQCVEKSV EILRDKIKQGMEEIDINPFWSVSNRSV
Sequences:
>Translated_587_residues MQQLQSAVQAYQGRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKEVEGKVEEASVFFQKAIAIYRKAIE VKPDSGQAYVNLVTVLNKDGRLDEARVAIECLLSLKPPDDRQSLDFSCGQLVLDWYRIRVNGLFWDVELKGFLASNSHLS AVRSTDAMCFPPLFLKDGKEDACRREFYEKGFVTQRGVISGSDCAALVDELPGIGLMSERLIQIVLERNILRSVVKSAFE LSGFPHLIWNCICFAKGPDDKAHSDDWHLDNHYNIWTSKLIVYLNSQSDELGATELVEASLSKELSEKSDYTGLVTDRDF YIQCLSGLVDELGLEAESLDPPHYTFSPDEAGTGVWFCPARVLHRGVSPKKGLRHVLTFSLTPLPRDCQWSMEQCVEKSV EILRDKIKQGMEEIDINPFWSVSNRSV >Mature_587_residues MQQLQSAVQAYQGRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKEVEGKVEEASVFFQKAIAIYRKAIE VKPDSGQAYVNLVTVLNKDGRLDEARVAIECLLSLKPPDDRQSLDFSCGQLVLDWYRIRVNGLFWDVELKGFLASNSHLS AVRSTDAMCFPPLFLKDGKEDACRREFYEKGFVTQRGVISGSDCAALVDELPGIGLMSERLIQIVLERNILRSVVKSAFE LSGFPHLIWNCICFAKGPDDKAHSDDWHLDNHYNIWTSKLIVYLNSQSDELGATELVEASLSKELSEKSDYTGLVTDRDF YIQCLSGLVDELGLEAESLDPPHYTFSPDEAGTGVWFCPARVLHRGVSPKKGLRHVLTFSLTPLPRDCQWSMEQCVEKSV EILRDKIKQGMEEIDINPFWSVSNRSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 8 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=357, Percent_Identity=27.7310924369748, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI32307150, Length=357, Percent_Identity=27.7310924369748, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI118766330, Length=224, Percent_Identity=29.9107142857143, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI118766328, Length=224, Percent_Identity=29.9107142857143, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI301336134, Length=268, Percent_Identity=26.4925373134328, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI83415184, Length=268, Percent_Identity=26.4925373134328, Blast_Score=80, Evalue=7e-15, Organism=Homo sapiens, GI22749211, Length=277, Percent_Identity=28.158844765343, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI224809432, Length=247, Percent_Identity=24.2914979757085, Blast_Score=70, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115532692, Length=357, Percent_Identity=26.890756302521, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI115532690, Length=357, Percent_Identity=26.890756302521, Blast_Score=131, Evalue=1e-30, Organism=Caenorhabditis elegans, GI25147174, Length=234, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17560436, Length=213, Percent_Identity=24.4131455399061, Blast_Score=72, Evalue=9e-13, Organism=Caenorhabditis elegans, GI25146105, Length=206, Percent_Identity=24.7572815533981, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI193210476, Length=213, Percent_Identity=26.2910798122066, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6319387, Length=178, Percent_Identity=28.0898876404494, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI17647755, Length=357, Percent_Identity=26.890756302521, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585827, Length=357, Percent_Identity=26.890756302521, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24585829, Length=357, Percent_Identity=26.890756302521, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24647123, Length=219, Percent_Identity=26.4840182648402, Blast_Score=93, Evalue=5e-19, Organism=Drosophila melanogaster, GI161076610, Length=305, Percent_Identity=23.9344262295082, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI19920486, Length=305, Percent_Identity=23.9344262295082, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI281364285, Length=181, Percent_Identity=30.939226519337, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581187, Length=181, Percent_Identity=30.939226519337, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI24656717, Length=290, Percent_Identity=23.7931034482759, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI18110006, Length=290, Percent_Identity=23.7931034482759, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 - InterPro: IPR001440 - InterPro: IPR011717 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]
EC number: NA
Molecular weight: Translated: 65732; Mature: 65732
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQLQSAVQAYQGRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE HHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEE KEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKEVEGKVEEASVFFQKAIAIYRKAIE ECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC VKPDSGQAYVNLVTVLNKDGRLDEARVAIECLLSLKPPDDRQSLDFSCGQLVLDWYRIRV CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEE NGLFWDVELKGFLASNSHLSAVRSTDAMCFPPLFLKDGKEDACRREFYEKGFVTQRGVIS EEEEEEEEEEEEEECCCHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC GSDCAALVDELPGIGLMSERLIQIVLERNILRSVVKSAFELSGFPHLIWNCICFAKGPDD CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC KAHSDDWHLDNHYNIWTSKLIVYLNSQSDELGATELVEASLSKELSEKSDYTGLVTDRDF CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHH YIQCLSGLVDELGLEAESLDPPHYTFSPDEAGTGVWFCPARVLHRGVSPKKGLRHVLTFS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCHHHHHHHHHHHC LTPLPRDCQWSMEQCVEKSVEILRDKIKQGMEEIDINPFWSVSNRSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQQLQSAVQAYQGRDLDDAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE HHCCCCCCCCEEECCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL HHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEECCEEE KEEGEFEEAIASYRKAIEVKPDFEDAYFNLGLLLKEVEGKVEEASVFFQKAIAIYRKAIE ECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC VKPDSGQAYVNLVTVLNKDGRLDEARVAIECLLSLKPPDDRQSLDFSCGQLVLDWYRIRV CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHEEE NGLFWDVELKGFLASNSHLSAVRSTDAMCFPPLFLKDGKEDACRREFYEKGFVTQRGVIS EEEEEEEEEEEEEECCCHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCC GSDCAALVDELPGIGLMSERLIQIVLERNILRSVVKSAFELSGFPHLIWNCICFAKGPDD CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC KAHSDDWHLDNHYNIWTSKLIVYLNSQSDELGATELVEASLSKELSEKSDYTGLVTDRDF CCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHH YIQCLSGLVDELGLEAESLDPPHYTFSPDEAGTGVWFCPARVLHRGVSPKKGLRHVLTFS HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCHHHHHHHHHHHC LTPLPRDCQWSMEQCVEKSVEILRDKIKQGMEEIDINPFWSVSNRSV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]