| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024088
Identifier: 124024088
GI number: 124024088
Start: 2110589
End: 2111143
Strand: Reverse
Name: 124024088
Synonym: P9303_23971
Alternate gene names: NA
Gene position: 2111143-2110589 (Counterclockwise)
Preceding gene: 124024089
Following gene: 124024087
Centisome position: 78.7
GC content: 50.81
Gene sequence:
>555_bases TTGATATCAACCCCTTTTGGTCTGTATCAAATAGGTCTGTATAGGCAGAAACCAAGCCACTTCTGCGAAGCCAGGTATTA CGCCACTGCCATCGCACCGAAAGACCACAGGCGAGTGCTGAATACATTGCGTTATATCCACGCCAATCCAAAGGCAGCAG GAATAAGAAAAGGGTTTTATGACCCCTATTCCAATTACGGGCATTACGGACGGTTGGCATGTGATGGCATCAGCGAATGG CACCCAAGCTTTCTGCAACTGGCATCAAGCCTGAAGGGATGTTCCAGGCGATATGAGCGGTTTTGCCAGAAGTATCGCCA TCACGCGAAGGGAGGAGCTAAGTGCCATTGGGGCTCAAGGATGCTGAAGCGATTGGTTGGGAGCAGTAGAAGCAAGGGAA AGCGTGTCTCGCCAGGGCAACAGCAACTGCCGTTTGTATTTGATGTGCGGCTCAATCAAATTCCAGAGGAGTGGCATCAA GTTGCGGTGAGATTTAGACAAGCCAATGGCATCCGTGATGGCGACAGGGAGCGAAGGTTTTGGCAGTTGCGTTGA
Upstream 100 bases:
>100_bases TTGACACCACTTCCTAGAGATTGTCAGTGGTCCATGGAGCAGTGCGTCGAGAAGTCAGTAGAGATATTGAGGGACAAGAT TAAGCAAGGTATGGAAGAAA
Downstream 100 bases:
>100_bases GGGAATAAGGGTAGATGTAGGACTAAAGAAAGCTGAGGCTTTATTTGTTCTGCCTTGTATTCGTGGATGGATTAGGCGGT TGGGCGGGTGAAAGCGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MISTPFGLYQIGLYRQKPSHFCEARYYATAIAPKDHRRVLNTLRYIHANPKAAGIRKGFYDPYSNYGHYGRLACDGISEW HPSFLQLASSLKGCSRRYERFCQKYRHHAKGGAKCHWGSRMLKRLVGSSRSKGKRVSPGQQQLPFVFDVRLNQIPEEWHQ VAVRFRQANGIRDGDRERRFWQLR
Sequences:
>Translated_184_residues MISTPFGLYQIGLYRQKPSHFCEARYYATAIAPKDHRRVLNTLRYIHANPKAAGIRKGFYDPYSNYGHYGRLACDGISEW HPSFLQLASSLKGCSRRYERFCQKYRHHAKGGAKCHWGSRMLKRLVGSSRSKGKRVSPGQQQLPFVFDVRLNQIPEEWHQ VAVRFRQANGIRDGDRERRFWQLR >Mature_184_residues MISTPFGLYQIGLYRQKPSHFCEARYYATAIAPKDHRRVLNTLRYIHANPKAAGIRKGFYDPYSNYGHYGRLACDGISEW HPSFLQLASSLKGCSRRYERFCQKYRHHAKGGAKCHWGSRMLKRLVGSSRSKGKRVSPGQQQLPFVFDVRLNQIPEEWHQ VAVRFRQANGIRDGDRERRFWQLR
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21559; Mature: 21559
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTPFGLYQIGLYRQKPSHFCEARYYATAIAPKDHRRVLNTLRYIHANPKAAGIRKGFY CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC DPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRYERFCQKYRHHAKGGAKCHWGSR CCCCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MLKRLVGSSRSKGKRVSPGQQQLPFVFDVRLNQIPEEWHQVAVRFRQANGIRDGDRERRF HHHHHHCCCCCCCCCCCCCCHHCCEEEEHHHHHCHHHHHHHHHHHHHHCCCCCCCHHCCC WQLR CCCC >Mature Secondary Structure MISTPFGLYQIGLYRQKPSHFCEARYYATAIAPKDHRRVLNTLRYIHANPKAAGIRKGFY CCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC DPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRYERFCQKYRHHAKGGAKCHWGSR CCCCCCCCCCCEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH MLKRLVGSSRSKGKRVSPGQQQLPFVFDVRLNQIPEEWHQVAVRFRQANGIRDGDRERRF HHHHHHCCCCCCCCCCCCCCHHCCEEEEHHHHHCHHHHHHHHHHHHHHCCCCCCCHHCCC WQLR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA