| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is psaA
Identifier: 124024041
GI number: 124024041
Start: 2064425
End: 2066755
Strand: Reverse
Name: psaA
Synonym: P9303_23481
Alternate gene names: 124024041
Gene position: 2066755-2064425 (Counterclockwise)
Preceding gene: 124024044
Following gene: 124024040
Centisome position: 77.04
GC content: 52.51
Gene sequence:
>2331_bases ATGACCATTAGCCCACCAGAGCGTGGGGAAAAAGCGAAGCCTATTTACGATCAACCAGTCGACCGGGACCACGTTCCAGC CGACTTCGAAAAATTCGAACAACCCGGATTTTTCTCGAAAAGCCTCGCTAAGGGACCAAACTCCACAACCTGGATTTGGA ACCTCCACGCTGACGCCCACGACTTCGATACCCACATTGGGGATCTGGAAGAAACCAGCCGGAAGATCTTTTCGGCGCAC TTCGGCCATTTGGCCATAGTGTTTATTTGGTTAAGCGGTGCCTTCTTCCACGGTGCCCGCTTCTCCAACTACTCCGGCTG GCTAGCCGACCCCACGCACGTGAAAGCCAGTGCGCAGGTCGTTTGGCCAATTGTCGGTCAAGAAATCATGAATGCAGATG TGGGTGCCGGCTTTAACGGCATCCAGATCACCTCCGGCATTTTCCAAATGTGGAGGGCTTGGGGAATTACCAGTGAGACA GAGCTCATGGCTCTTGCAACTGGTGCCCTAATCATGGCTGGCCTTGTTCTCCATGGCGGAATCTTCCACTACCACAAAGC AGCTCCAAAGCTCGAGTGGTTTAAGAAGATTGAGTCGATGCTTCAGCACCATCAGATTGGTCTGTTTGGCTTGGGCTCTC TTGGTTGGACAGGTCACTTGATCCATGTGGCCAACCCCACCAACGCCCTATTGGATGCCATAGATGCAGGCACTCCAATG GTGCTTGATGGCAAGACCATTGCCACTGCAGCGGATATCCCTCTGCCCCACGAGCTCTACAACGCTGATCTCGTTGGCCA GATTTATCCAGGTCTTGCTTCAGGCATCGGGAATTTCTTCTCGGCTAATTGGTGGGCCTTTAGTGATTTTCTCACCAACA ACGGAGGAGTGAATCCTGTAACAGGTGCTCTATGGAGTACTGATGTTGCTCATCACCATTTGGCATGGGCGGTCTTTTTG ATGTTTGGTGGCCACGTATACCGCTCAAGATTCGGTATCGGCCACAGCATGAAAGAGATCATGGGGAACGTAAAGGGTGA CCCCCTCTTATTCCCAGCTCCCAATGGTCATAAAGGTCTCTTCGAGTTCCTTTCCAACAGCTGGCATGCTCAGCTGGCAG TAAACCTGGCATGCATTGGTTCAGGGAGCATCGTGGTTGCACACCACATGTATTCTCTACCTCCATATCCATACCTTGCG ACTGATTACCCAACGGTTCTTGGGCTATTCACACACCACATGTGGATTGGTGGTTTGATGATTTGCGGAGCAGCAGCTCA CGCTGGCATCGCAGTCATTCGTGACTATGACGTCTCAGTTCACGTCGATAACGTGCTTGATCGCATGTTCAAGGCGCGCG ATGCAATCATCAGTCACCTCAACTGGGTGTGTATGTTCCTTGGCTTCCACAGCTTCGGACTTTATATACACAACGACAGC ATGCGTGCTTTGGGTCGTTCCCAAGACATGTTCAGCGACTCTGCAATCCAGTTGCAGCCTGTCTTGGCTCAATGGATTCA AAGCCTTTGGGCGTCTTCAATTGGCACATCATCTGTGGTTGGCACGACAACAGGTCTGCCAGGTGCAGTGAGTGATGTAT TCAACGGAGGCGTTGTAGCAGTTGGCGGCAAGGTGGCTCTGATGGCTATTCCCTTGGGAACAGCCGACTTGATGATTCAC CACATCCATGCCTTCACCATTCACGTAACTTGCCTCATCCTTCTTAAGGGTGTGCTTTTTGCCCGCAGTTCCCGTCTTGT TCCTGACAAGGCGAATCTTGGCTTCCGCTTCTCTTGCGATGGCCCAGGTCGTGGTGGTACCTGCCAGGTTTCCTCTTGGG ACCACGTGTTCCTAGGCCTGTTCTGGATGTACAACTCCCTATCGATGGTGATCTTCTACTTCTCGTGGAAGATGCAAAGC GATGTATGGGGCACTGTCAATTCAGACGGGAGTGTGACTCATCTCGTTTCTGGCAACTTTGCTCAAAGCGCCATCACTGT GAATGGTTGGTTCCGTGACTTCCTATGGGCTCAGTCCTCACAGGTGCTCACGAGCTACGGCACTGGCCTAAGCGGCTATG GCCTGTTATTCCTTGGTGGCCACTTCGTGTGGGCCTTTAGCTTGATGTTCTTGTTCAGCGGCCGTGGCTACTGGCAGGAG CTATTTGAATCCATTATCTGGGCTCATAACAAGCTCAAGCTTGCTCCCACCATCCAGCCCCGGGCACTTTCGATTACGCA GGGCCGCGCAGTTGGTGTAACCCACTTCCTGTTTGGTGGCATTGTGACCACCTGGGCCTTCTTCCATGCCCGCCTTCTTG GGCTCGGCTGA
Upstream 100 bases:
>100_bases GCACCACTTCGGTGGTGGTGTCTCCGGGGCCCCGGCAAGCCCTTGGGCCTGTCGAAGGGGTGGCCCTCCACCTCGATCCC GTCCCTCGAGGAACCTCTCG
Downstream 100 bases:
>100_bases CCTTTCCTGACCTTTCCCCACATGGCAACGAAATTTCCTTCGTTCAGCCAGGGTCTGGCACAGGACCCTACAACCCGCCG TATTTGGTACGGCATAGCCA
Product: photosystem I P700 chlorophyll a apoprotein A1
Products: NA
Alternate protein names: PsaA
Number of amino acids: Translated: 776; Mature: 775
Protein sequence:
>776_residues MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAH FGHLAIVFIWLSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADVGAGFNGIQITSGIFQMWRAWGITSET ELMALATGALIMAGLVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGIGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFL MFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLA TDYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSSVVGTTTGLPGAVSDVFNGGVVAVGGKVALMAIPLGTADLMIH HIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQS DVWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG
Sequences:
>Translated_776_residues MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAH FGHLAIVFIWLSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADVGAGFNGIQITSGIFQMWRAWGITSET ELMALATGALIMAGLVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGIGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFL MFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLA TDYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSSVVGTTTGLPGAVSDVFNGGVVAVGGKVALMAIPLGTADLMIH HIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQS DVWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG >Mature_775_residues TISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAHDFDTHIGDLEETSRKIFSAHF GHLAIVFIWLSGAFFHGARFSNYSGWLADPTHVKASAQVVWPIVGQEIMNADVGAGFNGIQITSGIFQMWRAWGITSETE LMALATGALIMAGLVLHGGIFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPMV LDGKTIATAADIPLPHELYNADLVGQIYPGLASGIGNFFSANWWAFSDFLTNNGGVNPVTGALWSTDVAHHHLAWAVFLM FGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGLFEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLAT DYPTVLGLFTHHMWIGGLMICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDSM RALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSSVVGTTTGLPGAVSDVFNGGVVAVGGKVALMAIPLGTADLMIHH IHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCDGPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSD VWGTVNSDGSVTHLVSGNFAQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQEL FESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG
Specific function: PsaA and psaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which tran
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psaA/psaB family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSAA_PROM3 (A2CC73)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001018348.1 - ProteinModelPortal: A2CC73 - SMR: A2CC73 - STRING: A2CC73 - GeneID: 4778139 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_23481 - eggNOG: NOG05023 - HOGENOM: HBG284930 - OMA: FSAHFGH - ProtClustDB: PRK13200 - GO: GO:0015979 - GO: GO:0006810 - HAMAP: MF_00458 - InterPro: IPR006243 - InterPro: IPR001280 - InterPro: IPR020586 - Gene3D: G3DSA:1.20.1130.10 - PIRSF: PIRSF002905 - PRINTS: PR00257 - TIGRFAMs: TIGR01335
Pfam domain/function: PF00223 PsaA_PsaB
EC number: NA
Molecular weight: Translated: 84917; Mature: 84786
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00419 PHOTOSYSTEM_I_PSAAB
Important sites: BINDING 717-717 BINDING 718-718
Signals:
None
Transmembrane regions:
HASH(0x1793aebc)-; HASH(0x134e1e38)-; HASH(0x17d84938)-; HASH(0x17b28704)-; HASH(0x172e0700)-; HASH(0x174668b0)-; HASH(0x17703b18)-; HASH(0x1789e9cc)-; HASH(0x178f2b50)-; HASH(0x1787a8b4)-; HASH(0x175484a4)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCC DFDTHIGDLEETSRKIFSAHFGHLAIVFIWLSGAFFHGARFSNYSGWLADPTHVKASAQV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE VWPIVGQEIMNADVGAGFNGIQITSGIFQMWRAWGITSETELMALATGALIMAGLVLHGG EEHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC IFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM HHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCE VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGIGNFFSANWWAFSDFLTNNGGVNPV EECCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCC TGALWSTDVAHHHLAWAVFLMFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCHHH FEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLATDYPTVLGLFTHHMWIGGLM HHHHCCCCEEEEEEEEEEECCCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH ICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS HHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSSVVGTTTGLPGAVSDVFNGGVVA HHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEE VGGKVALMAIPLGTADLMIHHIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSDVWGTVNSDGSVTHLVSGNF CCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCCCEEEEECCCC AQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE CCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG HHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure TISPPERGEKAKPIYDQPVDRDHVPADFEKFEQPGFFSKSLAKGPNSTTWIWNLHADAH CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCCCCEEEEEECCCCC DFDTHIGDLEETSRKIFSAHFGHLAIVFIWLSGAFFHGARFSNYSGWLADPTHVKASAQV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEE VWPIVGQEIMNADVGAGFNGIQITSGIFQMWRAWGITSETELMALATGALIMAGLVLHGG EEHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC IFHYHKAAPKLEWFKKIESMLQHHQIGLFGLGSLGWTGHLIHVANPTNALLDAIDAGTPM HHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECCCHHHHHHHHCCCCCE VLDGKTIATAADIPLPHELYNADLVGQIYPGLASGIGNFFSANWWAFSDFLTNNGGVNPV EECCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCC TGALWSTDVAHHHLAWAVFLMFGGHVYRSRFGIGHSMKEIMGNVKGDPLLFPAPNGHKGL CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCCHHH FEFLSNSWHAQLAVNLACIGSGSIVVAHHMYSLPPYPYLATDYPTVLGLFTHHMWIGGLM HHHHCCCCEEEEEEEEEEECCCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHHHHHHHHH ICGAAAHAGIAVIRDYDVSVHVDNVLDRMFKARDAIISHLNWVCMFLGFHSFGLYIHNDS HHHHHHHCCEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC MRALGRSQDMFSDSAIQLQPVLAQWIQSLWASSIGTSSVVGTTTGLPGAVSDVFNGGVVA HHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCEEE VGGKVALMAIPLGTADLMIHHIHAFTIHVTCLILLKGVLFARSSRLVPDKANLGFRFSCD ECCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GPGRGGTCQVSSWDHVFLGLFWMYNSLSMVIFYFSWKMQSDVWGTVNSDGSVTHLVSGNF CCCCCCEEEECCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEECCCCCEEEEECCCC AQSAITVNGWFRDFLWAQSSQVLTSYGTGLSGYGLLFLGGHFVWAFSLMFLFSGRGYWQE CCCEEEECHHHHHHHHHCCCHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCHHHH LFESIIWAHNKLKLAPTIQPRALSITQGRAVGVTHFLFGGIVTTWAFFHARLLGLG HHHHHHHCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA