| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is dinG [C]
Identifier: 124023988
GI number: 124023988
Start: 2026490
End: 2027935
Strand: Direct
Name: dinG [C]
Synonym: P9303_22951
Alternate gene names: 124023988
Gene position: 2026490-2027935 (Clockwise)
Preceding gene: 124023986
Following gene: 124023989
Centisome position: 75.54
GC content: 55.95
Gene sequence:
>1446_bases ATGCTCGAAGCCCGCAGCCATCAGCAGCTCAAGCACCTGCTCCTGCAGAACTCCTCCCCCTGGCCTCATCATCTCACTTT GAGCCGTCTTGTTGCCCGCAGTCTCAGGCGCAAAGATCACACCCTGATCCAGCTCGACCCTCGTAGCAAAGACCTCTGGT GGCTTGGTCTGCTGGTTCCCCTCTGCCTGGAGGCCAAGGATGCTGTGATGATCCTTTCCGATCAGCAGCGACGCCGACTC CTCAAAGTAGAACTGCCACAACTGCTGACGAAAGGCATCAAACTCCCCTGCTGGGAAGGGCACCTTCCGCCCTCAGGGAA TCAACTGTGGTTGATGAACCACAGTGAGTTGATTGAGGCACACCACCAGGGGCATCTCAAATCAAGGCAGTTGATCATTC CAGAAGCAGACCAACTAAGCCAGCGACTCAGGGACAGCATGGCTTTGTCGATCACACCTCAAGACTGGGAGCGTTTGCGG CGGGCCCATCCTTCTGCGGAGGCTTCCCTCATGCAACTGCACGAACGATTAAGCCGCAGCCTGTTTACTCACGCCACCCG AGCCAATGCCCAGGTTCGCCTTGATGGCAGCGAAATTCAGGCTCTCAAAGATCTCATGCGACTTCTAGGCCCCTCACCTT CCCCTTGGCCTTCAGTGCTGAAAGCCGATAGCCGTTTTTGGGCAAGCTGGGCCGAACTCGATCACCGACTACTGCAATGG CAATGGCATCTACAACCGCTCGAACCCCTTCAAAATCTTCCAGGTCTGTTACGAGACCAGCCGTCTGTCCTGCTGAGCGG ATCAAGGGAGAACGATCTCGTCCGCACTGAGTTGGACGCTGCAGCATTTCCTGCCACCGTCATGGCCAGATTGAGTGAAC CCAACCTGCAGGAACCAATACCTCTTTTTGCACCGCGCCGCCAACCACTACCGAATACCGAAATCTATGCAGAGCATCTG CTTGATCAATGCCGCCGTCTGATCCTGGGGCGTCCGGGCATCACTGTGGTGTTACTTGACGATCAACAACTGCGCCGCCA ACTCACAAGTGAGTTGGCGGCGGAATTTGGACGCAGAGTCGTTCATGAAACCACCGCTCCGGAATCCAACGGTGTTGTCT GTTGCCGCTGGACTTGGTGGCTTCATCACCAGGATCAACTCCCTCTCCCAGAACAACTAATCGTGGCCTTGCTTCCCCTG GCGAGCGTAGAATCACCACTCACAGCAGCAAGAGTAGAATCCCTCAAGAATCAAGGTCGTGACTGGTTCCGAGACCTTCT CTTGCCTGAAGCTCTCAGCCTGCTTACACCAGCCATAGCTCCGCTCCGAAAAAATCACGGACGACTAGCAATCCTGGACG GACGTCTACGAGGACGGAGCTGGGGGAAGCAAGTGCTGAGCACACTCGAACCCTGGACACCCCTGCAACGCCTATTACCG GATTAA
Upstream 100 bases:
>100_bases TTTGTTCTGCTCCATCCCTTCGGTTCTCGCACTGCAGTCCATGTTGATCGACCAATCAACATGGAGCTTTCTCGGGTTTA CGGCTTCCTAGGCTCTCGCA
Downstream 100 bases:
>100_bases GCCAACTACTCTTTAACAACCAAACAGCAACGAGGAAGGCCATGGGAGAAGCCAGACGACGATCCGATCAGGGCCTAGCA CCACGCCAGAAACAGTCCAA
Product: Rad3-related DNA helicase
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPSVLKADSRFWASWAELDHRLLQW QWHLQPLEPLQNLPGLLRDQPSVLLSGSRENDLVRTELDAAAFPATVMARLSEPNLQEPIPLFAPRRQPLPNTEIYAEHL LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWTWWLHHQDQLPLPEQLIVALLPL ASVESPLTAARVESLKNQGRDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP D
Sequences:
>Translated_481_residues MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPSVLKADSRFWASWAELDHRLLQW QWHLQPLEPLQNLPGLLRDQPSVLLSGSRENDLVRTELDAAAFPATVMARLSEPNLQEPIPLFAPRRQPLPNTEIYAEHL LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWTWWLHHQDQLPLPEQLIVALLPL ASVESPLTAARVESLKNQGRDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP D >Mature_481_residues MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVPLCLEAKDAVMILSDQQRRRL LKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEAHHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLR RAHPSAEASLMQLHERLSRSLFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPSVLKADSRFWASWAELDHRLLQW QWHLQPLEPLQNLPGLLRDQPSVLLSGSRENDLVRTELDAAAFPATVMARLSEPNLQEPIPLFAPRRQPLPNTEIYAEHL LDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRVVHETTAPESNGVVCCRWTWWLHHQDQLPLPEQLIVALLPL ASVESPLTAARVESLKNQGRDWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP D
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55139; Mature: 55139
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVP CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH LCLEAKDAVMILSDQQRRRLLKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEA HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHH HHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLRRAHPSAEASLMQLHERLSRS HHHCCCCCCEEECCCHHHHHHHHHHHHEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHH LFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPSVLKADSRFWASWAELDHRLLQW HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QWHLQPLEPLQNLPGLLRDQPSVLLSGSRENDLVRTELDAAAFPATVMARLSEPNLQEPI HCCCCCHHHHHCCCHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PLFAPRRQPLPNTEIYAEHLLDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VHETTAPESNGVVCCRWTWWLHHQDQLPLPEQLIVALLPLASVESPLTAARVESLKNQGR HHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH DWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCC D C >Mature Secondary Structure MLEARSHQQLKHLLLQNSSPWPHHLTLSRLVARSLRRKDHTLIQLDPRSKDLWWLGLLVP CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH LCLEAKDAVMILSDQQRRRLLKVELPQLLTKGIKLPCWEGHLPPSGNQLWLMNHSELIEA HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHH HHQGHLKSRQLIIPEADQLSQRLRDSMALSITPQDWERLRRAHPSAEASLMQLHERLSRS HHHCCCCCCEEECCCHHHHHHHHHHHHEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHH LFTHATRANAQVRLDGSEIQALKDLMRLLGPSPSPWPSVLKADSRFWASWAELDHRLLQW HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH QWHLQPLEPLQNLPGLLRDQPSVLLSGSRENDLVRTELDAAAFPATVMARLSEPNLQEPI HCCCCCHHHHHCCCHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC PLFAPRRQPLPNTEIYAEHLLDQCRRLILGRPGITVVLLDDQQLRRQLTSELAAEFGRRV CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH VHETTAPESNGVVCCRWTWWLHHQDQLPLPEQLIVALLPLASVESPLTAARVESLKNQGR HHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCH DWFRDLLLPEALSLLTPAIAPLRKNHGRLAILDGRLRGRSWGKQVLSTLEPWTPLQRLLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA