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The map label for this gene is 124023986

Identifier: 124023986

GI number: 124023986

Start: 2024016

End: 2025527

Strand: Direct

Name: 124023986

Synonym: P9303_22931

Alternate gene names: NA

Gene position: 2024016-2025527 (Clockwise)

Preceding gene: 124023984

Following gene: 124023988

Centisome position: 75.45

GC content: 56.48

Gene sequence:

>1512_bases
ATGGCTGAGGACTCAATCATCGTGATCGGGGGCGGCATTGCCGGCCTAACGGCAACAGCCCTCTTAGCCAAGCAAGGATT
ACCCGTCACCCTGGTGGAAGCGCACCATCAACCTGGAGGTTGTGCCGGCACCTTCAGGCGAGGTCCCTATATCTTCGATG
TAGGGGCCACTCAGGTTGCCGGCCTAGAACCCAGTGGCAGCCATGAACGCATCTATAGGCATCTCAACCTGACCATGCCA
CAAGCGGAGCTACTCAATCCCGCTTGTGCAGTTGATCTCGCCGACGGATCCCAACCCATTCAGCTCTGGCATGATCCAAA
GCGCTGGGAACAAGAATGGAGATATCACTTCCCTGGCAGTGAGGCCTTCTGGGCTCTGACTGCCAAGCTCCACCAAAGCA
ACTGGGGCTTTGCCAGCCATGATCCGGTGGTCACACCCCGCAACGCTTGGGATTTAGGCCAACTACTTCAGGCGCTGCGT
CCAGCAACAATCACCTCAGGGCTATTGAGCAGCCTGACAGTGGCAGATCTCTTAAAGCTATGCGGCTGTGCGCAGGATCA
GCGCCTTCGCAAATTCCTAGACCTCCAGATCAAGCTCTATTCGCAAGAACCGCTCGATCGCACAGCCGCCCTCTATGGAG
CCACCGTTTTGCAAATGGCTCAAGCACCTCTTGGGCTCTGGCATCTGCAGGGATCGATGCAAAAACTCAGCGATGACCTA
ATGCATGCCCTGAAGCGGGATGGCGGCCAGGTATTGCTGCGCCATCGTGTGGTGGGCCTAGAAGTAGCTGCGCGGGGCAT
GGCTTGGACAGTCAGCATCAAAACCCCCAATGGCAAGGCTTTAGAACTGACCACACCAGATGTGGTATGCAGTCTGCCTC
CTCAATGCCTGAGATCGCTGATGCCACAAGGAGCAGGCATGCCCAAGGCCTATCGCCAAAGGCTAATGAAATTACCTCAA
CCCAGTGGAGCTTTGGTGTTCTACGGGGCCATCGATCGCAGCGCCCTACCTAAGAACTGTCCTGTCCATCTGCAAAGAGC
CTCCAAGACACCCGGCTCCCTGTTCGTATCAATCAGCCGTGAGGGAGATGGCCGTGCTCCCGCTGGACAAGCCACAGTGA
TTGCAAGTGTGTTCACCGCCACAGCGGAGTGGTGTGGCCTAACTGAATCCACCTATCAAGAACGCAAGCAAACGGCCCTG
TTAGCCATCCGCCAAACACTTGAAAGTTGGTTAGATCTCGCACCTGAAGATTGGCAGCATCAAGAACTAGCCACACCCAG
GAGCTTTGCACATTGGACTGGTCGGCCCAATGGAATTGTGGGTGGCCTTGGGCAGCACCCTTCACAATTTGGGCCCTTCG
GACTAGCAAGCCGAACTCCCATGCGAGGGCTCTGGCTCTGTGGCGACTCAATTCACCCTGGTGAAGGTACTGCAGGGGTG
AGCATCTCGGCACTCATGACCTGTCGCCAGCTCATGGCTCAGCGAGGTCATCAGTTACGGGTGGCGAATTGA

Upstream 100 bases:

>100_bases
TTAATCACTTCACCACTCAAGGGTCCCTCGGCTGCTACCAGGCCCTGTCTCAGACGCTCGTTCATACCCACACCTCTCTA
GACCTTGCCAGCATGAACGG

Downstream 100 bases:

>100_bases
GGTCGTTGTTGGCAGCAACAAGAAAGCTGGGTCGCAATGCCTGGGAACGTTCCAATTCAGCCTTTAACTGCGACCAGTGC
CCATTCAAAACGGCCTCCTC

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: C-3 4' Desaturase CrtD; FAD Dependent Oxidoreductase; Phytoene Dehydrogenase; Carotenoid Isomerase; Carotene Isomerase; Phytoene Dehydrogenase ; Phytoene Dehydrogenase-Related Protein; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase/Carotenoid Isomerase

Number of amino acids: Translated: 503; Mature: 502

Protein sequence:

>503_residues
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLTMP
QAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSEAFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALR
PATITSGLLSSLTVADLLKLCGCAQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
MHALKRDGGQVLLRHRVVGLEVAARGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGAGMPKAYRQRLMKLPQ
PSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWCGLTESTYQERKQTAL
LAIRQTLESWLDLAPEDWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
SISALMTCRQLMAQRGHQLRVAN

Sequences:

>Translated_503_residues
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLTMP
QAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSEAFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALR
PATITSGLLSSLTVADLLKLCGCAQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
MHALKRDGGQVLLRHRVVGLEVAARGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGAGMPKAYRQRLMKLPQ
PSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWCGLTESTYQERKQTAL
LAIRQTLESWLDLAPEDWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
SISALMTCRQLMAQRGHQLRVAN
>Mature_502_residues
AEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVAGLEPSGSHERIYRHLNLTMPQ
AELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGSEAFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRP
ATITSGLLSSLTVADLLKLCGCAQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDLM
HALKRDGGQVLLRHRVVGLEVAARGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSLMPQGAGMPKAYRQRLMKLPQP
SGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISREGDGRAPAGQATVIASVFTATAEWCGLTESTYQERKQTALL
AIRQTLESWLDLAPEDWQHQELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGVS
ISALMTCRQLMAQRGHQLRVAN

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54636; Mature: 54505

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVA
CCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE
GLEPSGSHERIYRHLNLTMPQAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGS
CCCCCCCHHHHHHHHCCCCCHHHHCCCHHEEEECCCCCCEEECCCHHHHHHHCCEECCCC
EAFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRPATITSGLLSSLTVADLLKL
CHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGCAQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
HCCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
MHALKRDGGQVLLRHRVVGLEVAARGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSL
HHHHHCCCCCEEEHHHHHHHHEECCCEEEEEEEECCCCCEEEEECCCCEECCCHHHHHHH
MPQGAGMPKAYRQRLMKLPQPSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISR
CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHEECCCCCCEEEEEEEC
EGDGRAPAGQATVIASVFTATAEWCGLTESTYQERKQTALLAIRQTLESWLDLAPEDWQH
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
SISALMTCRQLMAQRGHQLRVAN
HHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure 
AEDSIIVIGGGIAGLTATALLAKQGLPVTLVEAHHQPGGCAGTFRRGPYIFDVGATQVA
CCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCEEE
GLEPSGSHERIYRHLNLTMPQAELLNPACAVDLADGSQPIQLWHDPKRWEQEWRYHFPGS
CCCCCCCHHHHHHHHCCCCCHHHHCCCHHEEEECCCCCCEEECCCHHHHHHHCCEECCCC
EAFWALTAKLHQSNWGFASHDPVVTPRNAWDLGQLLQALRPATITSGLLSSLTVADLLKL
CHHEEHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGCAQDQRLRKFLDLQIKLYSQEPLDRTAALYGATVLQMAQAPLGLWHLQGSMQKLSDDL
HCCCCHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHH
MHALKRDGGQVLLRHRVVGLEVAARGMAWTVSIKTPNGKALELTTPDVVCSLPPQCLRSL
HHHHHCCCCCEEEHHHHHHHHEECCCEEEEEEEECCCCCEEEEECCCCEECCCHHHHHHH
MPQGAGMPKAYRQRLMKLPQPSGALVFYGAIDRSALPKNCPVHLQRASKTPGSLFVSISR
CCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHEECCCCCCEEEEEEEC
EGDGRAPAGQATVIASVFTATAEWCGLTESTYQERKQTALLAIRQTLESWLDLAPEDWQH
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
QELATPRSFAHWTGRPNGIVGGLGQHPSQFGPFGLASRTPMRGLWLCGDSIHPGEGTAGV
HHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
SISALMTCRQLMAQRGHQLRVAN
HHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA