Click here to switch to the map view.

The map label for this gene is 124023983

Identifier: 124023983

GI number: 124023983

Start: 2022119

End: 2022622

Strand: Reverse

Name: 124023983

Synonym: P9303_22901

Alternate gene names: NA

Gene position: 2022622-2022119 (Counterclockwise)

Preceding gene: 124023985

Following gene: 124023982

Centisome position: 75.4

GC content: 54.37

Gene sequence:

>504_bases
ATGCCAGGGCTGCTGGAGTTTGATCGTAATTGCCTGATGGTTCTTCGTCGCAGCTTATTGGCTGTGGCGCCATTTGAGGG
ATGTGCTCTTTTATTGGGTGATCAAGATGATTCTAATAGTGATCAAGGCGGCAGTATCTGGAATGTTCGGCTGATTTGGC
CTTGCTGCAATGTATGGGGGCCGGGAATGTTAAGCCTCCCTGAAGGCTCGAATGATCCGAATCTTGGGGTTGAGCTGCTG
CCATCACGCAAGTGTCGCTTTGCTTTGGATCCTCGTGAACAGTTGCAGGCTCAACGCTTTGCCAGAGAGCACAATTGGCA
GGTGTTGGGCAGTGCCCATTCTCATCCTGGCGGTGAGGCTGTGCCGTCCGTGATGGATCATCGCTGGGCCACTGTGCCGT
CGTTACTGGTGATCGTGGCTGGTTCAGGCAATGTGCGCGCTTGGTGGCTGACAGGAGTGCAACCTGGCGAGCAGCATGAG
GTTGCGCATTTGGGACAGTGGTAA

Upstream 100 bases:

>100_bases
TTTTCTGTGGTGGATTGTTCGTTTGTCACGGTGTTGATGTCGCTCATGAACACGAAACCGATGGCAAATCTTTGCCGAGC
GTATCGAAAGGATCTTTGTT

Downstream 100 bases:

>100_bases
GGGCATAGCTAGCGGCACTCTTTCCCCTATGGGTCTTCACGAAACCGTTGATGTTGGCCTGAGCCCCGATGAGTTAGAGC
GTTTTTCTCGCCATCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDQGGSIWNVRLIWPCCNVWGPGMLSLPEGSNDPNLGVELL
PSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWATVPSLLVIVAGSGNVRAWWLTGVQPGEQHE
VAHLGQW

Sequences:

>Translated_167_residues
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDQGGSIWNVRLIWPCCNVWGPGMLSLPEGSNDPNLGVELL
PSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWATVPSLLVIVAGSGNVRAWWLTGVQPGEQHE
VAHLGQW
>Mature_166_residues
PGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDQGGSIWNVRLIWPCCNVWGPGMLSLPEGSNDPNLGVELLP
SRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEAVPSVMDHRWATVPSLLVIVAGSGNVRAWWLTGVQPGEQHEV
AHLGQW

Specific function: Unknown

COG id: COG1310

COG function: function code R; Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18407; Mature: 18276

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDQGGSIWNVRLIWPCCNVWG
CCCCHHHCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCC
PGMLSLPEGSNDPNLGVELLPSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEA
CCEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCH
VPSVMDHRWATVPSLLVIVAGSGNVRAWWLTGVQPGEQHEVAHLGQW
HHHHHHCCHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGLLEFDRNCLMVLRRSLLAVAPFEGCALLLGDQDDSNSDQGGSIWNVRLIWPCCNVWG
CCCHHHCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCC
PGMLSLPEGSNDPNLGVELLPSRKCRFALDPREQLQAQRFAREHNWQVLGSAHSHPGGEA
CCEEECCCCCCCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHCCEEEEECCCCCCCCCH
VPSVMDHRWATVPSLLVIVAGSGNVRAWWLTGVQPGEQHEVAHLGQW
HHHHHHCCHHCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA