Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023954

Identifier: 124023954

GI number: 124023954

Start: 1997084

End: 1998526

Strand: Direct

Name: 124023954

Synonym: P9303_22611

Alternate gene names: NA

Gene position: 1997084-1998526 (Clockwise)

Preceding gene: 124023953

Following gene: 124023955

Centisome position: 74.44

GC content: 56.48

Gene sequence:

>1443_bases
TTGCAGAGAACTAAGACGAGAACGCGCCAGTTACTGCAACTTGTTTGGAGGACATTGTCGAAGGCGGCACCCAGATTCGA
ACTGGGGATAAAGGATTTGCAATCCTCTGCCTTACCACTTGGCCATGCCGCCGCCAGGGAGACTCAATTCCCTTCAGCGG
ATCGTATCAGCCACTCTGCTAGCTCTCTGCTCGTGATTTGCAACGGGCATGGCGAGGATCTGATTGCACTACGGGTGTTG
GAGGCACTACATCGCAAATGTCCGAATCTGCCCATTGAAGTGCTTCCCCTCGTAGGGGTAGGACAAGCTTTTGAACATGC
CTTAGCCGCTGGATGGCTTCAGCGCCTGGGCCCTTCAGCGCCCTTGCCAAGTGGTGGCTTCAGCAATCAAAGCTTGCGGG
GCCTGATTGCTGATCTTGCCGCCGGACTCACTCTGCTCAGCTGGCGACAGTGGCGATGTGTGCGCCGCTCAGCCAAAGCT
GGCAAAGCCATTCTGGCAGTAGGAGACCTGTTGCCCCTGCTCATGGCATGGAGCAGTGGTGGAACCTATGGCTTCATCGG
CACACCGAAAAGTGATTACACCTGGAGAAGCGGACCAGGCCGGGCCTTGAGCGACCACTACCACCGCCTCAAAGGCAGTG
AATGGGATCCCTGGGAATGGGCCCTAATGCGATCTTCGCGATGCCGAGTGGTTGCCGTTCGTGATCATCTCACCGCCAGA
GGACTACGACGCCACGGGGTCGCCGCAAAGGCGCCTGGGAACCCAATGATGGATGGATTCAAGGTCGAATCAATTCCTGC
CGCCCTCAACCGATGCCGGCGGCTGTTATTGCTCTGTGGAAGTCGAATGCCCGAAGCAGGCACGAATTTCAAGCGACTCC
TTGAAGGCCTAGACCAGCTCAATAGCGATTTACCGCTAGCAGTACTTGTAGCCTTTGGCTCCCAACCCAGCCTCAACCAG
CTTGAAGCGATTCTCAGAACCGATGGATACCTACCATCCCCCCCCCCCATCGACATCCTGGGAGCCAAGGCCTGCTGGGT
CAAAGGTACACAGCTCTTACTGCTCGGGCCTGGTCAATTCAACCGCTGGGCGGCCTGGACCGAAGTGGGCCTTGTCACTG
CTGGAACCGCCACAGAACAACTTGTAGGGCTAGGCATTCCGGCCTTATCCATGCCTGGACCAGGACCACAATTCAAACGA
CAATTCGCCATGCGGCAAAGTCGCCTCTTGGGAGGAGCTGTACTGCCCTGTCAAAGCAAAGAAGAACTGGCAGACAGGCT
GCAGAGACTGTTAAAAGACGACTCCCTTCGACAGCGATTAGGCAGGATTGGCAACAGACGAATGGGAACAGCTGGCGGCA
GTGCTGCACTCGCAGCACTGATCTCACAGCTTTTATTAGGGCATACGAGAGCACCTAGACAACGCTCTTTTGACCCGCCA
TAG

Upstream 100 bases:

>100_bases
CTCCGGTTTCTTTAAGGCTAATCTCATTCGTTAAGTGAATGAAATCGTGACAACGTTGATTGAGAAGTAGCCCAACTCCC
CTTCCGCTCCCCTTCCGCTT

Downstream 100 bases:

>100_bases
CGGATACTGAACGCTTGCAGCACCACTGCCATGGCGGCCATGCAGGACCATGCCTTAGTGAAAATCTGCGCCGAACTGGC
CAGCTGCCTCAGCATTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MQRTKTRTRQLLQLVWRTLSKAAPRFELGIKDLQSSALPLGHAAARETQFPSADRISHSASSLLVICNGHGEDLIALRVL
EALHRKCPNLPIEVLPLVGVGQAFEHALAAGWLQRLGPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKA
GKAILAVGDLLPLLMAWSSGGTYGFIGTPKSDYTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTAR
GLRRHGVAAKAPGNPMMDGFKVESIPAALNRCRRLLLLCGSRMPEAGTNFKRLLEGLDQLNSDLPLAVLVAFGSQPSLNQ
LEAILRTDGYLPSPPPIDILGAKACWVKGTQLLLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKR
QFAMRQSRLLGGAVLPCQSKEELADRLQRLLKDDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGHTRAPRQRSFDPP

Sequences:

>Translated_480_residues
MQRTKTRTRQLLQLVWRTLSKAAPRFELGIKDLQSSALPLGHAAARETQFPSADRISHSASSLLVICNGHGEDLIALRVL
EALHRKCPNLPIEVLPLVGVGQAFEHALAAGWLQRLGPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKA
GKAILAVGDLLPLLMAWSSGGTYGFIGTPKSDYTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTAR
GLRRHGVAAKAPGNPMMDGFKVESIPAALNRCRRLLLLCGSRMPEAGTNFKRLLEGLDQLNSDLPLAVLVAFGSQPSLNQ
LEAILRTDGYLPSPPPIDILGAKACWVKGTQLLLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKR
QFAMRQSRLLGGAVLPCQSKEELADRLQRLLKDDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGHTRAPRQRSFDPP
>Mature_480_residues
MQRTKTRTRQLLQLVWRTLSKAAPRFELGIKDLQSSALPLGHAAARETQFPSADRISHSASSLLVICNGHGEDLIALRVL
EALHRKCPNLPIEVLPLVGVGQAFEHALAAGWLQRLGPSAPLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKA
GKAILAVGDLLPLLMAWSSGGTYGFIGTPKSDYTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTAR
GLRRHGVAAKAPGNPMMDGFKVESIPAALNRCRRLLLLCGSRMPEAGTNFKRLLEGLDQLNSDLPLAVLVAFGSQPSLNQ
LEAILRTDGYLPSPPPIDILGAKACWVKGTQLLLLGPGQFNRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKR
QFAMRQSRLLGGAVLPCQSKEELADRLQRLLKDDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGHTRAPRQRSFDPP

Specific function: Unknown

COG id: COG4370

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52145; Mature: 52145

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTKTRTRQLLQLVWRTLSKAAPRFELGIKDLQSSALPLGHAAARETQFPSADRISHSA
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHCCC
SSLLVICNGHGEDLIALRVLEALHRKCPNLPIEVLPLVGVGQAFEHALAAGWLQRLGPSA
CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKAGKAILAVGDLLPLLMAWSSG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GTYGFIGTPKSDYTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTAR
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECHHHHHH
GLRRHGVAAKAPGNPMMDGFKVESIPAALNRCRRLLLLCGSRMPEAGTNFKRLLEGLDQL
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
NSDLPLAVLVAFGSQPSLNQLEAILRTDGYLPSPPPIDILGAKACWVKGTQLLLLGPGQF
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCEECCCEEEEECCCCC
NRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKRQFAMRQSRLLGGAVLPCQSK
CCHHHHHHHCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
EELADRLQRLLKDDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGHTRAPRQRSFDPP
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRTKTRTRQLLQLVWRTLSKAAPRFELGIKDLQSSALPLGHAAARETQFPSADRISHSA
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHCCC
SSLLVICNGHGEDLIALRVLEALHRKCPNLPIEVLPLVGVGQAFEHALAAGWLQRLGPSA
CCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCC
PLPSGGFSNQSLRGLIADLAAGLTLLSWRQWRCVRRSAKAGKAILAVGDLLPLLMAWSSG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
GTYGFIGTPKSDYTWRSGPGRALSDHYHRLKGSEWDPWEWALMRSSRCRVVAVRDHLTAR
CCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCEEEEECHHHHHH
GLRRHGVAAKAPGNPMMDGFKVESIPAALNRCRRLLLLCGSRMPEAGTNFKRLLEGLDQL
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
NSDLPLAVLVAFGSQPSLNQLEAILRTDGYLPSPPPIDILGAKACWVKGTQLLLLGPGQF
CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCEECCCEEEEECCCCC
NRWAAWTEVGLVTAGTATEQLVGLGIPALSMPGPGPQFKRQFAMRQSRLLGGAVLPCQSK
CCHHHHHHHCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH
EELADRLQRLLKDDSLRQRLGRIGNRRMGTAGGSAALAALISQLLLGHTRAPRQRSFDPP
HHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA