Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124023948

Identifier: 124023948

GI number: 124023948

Start: 1994946

End: 1995170

Strand: Reverse

Name: 124023948

Synonym: P9303_22551

Alternate gene names: NA

Gene position: 1995170-1994946 (Counterclockwise)

Preceding gene: 124023956

Following gene: 124023946

Centisome position: 74.37

GC content: 42.67

Gene sequence:

>225_bases
ATGGATACTCTGGGCATCTCAACAGCAAGTAGAGCAATCTTTCTTCAATCGAAAAGAGCACTTGCTCAAGATTTTTTTAG
TTGCAGGTATCGTCTAGGCAAATCTCTGTTCGTATTCAAGGAGCCACTCAAGATTCAGGTGTGTTGGTTAATAAGAAAGG
CAATCGCTACTCAATGTTCACTTCATGGCATGTGGTCAGTGGTCATCGTGCTGGATAGGAACTAG

Upstream 100 bases:

>100_bases
GTCTCCAGCTATCCTGAAAATAGCAGAACACCTTTTACACAGATGCAGTAGTGCTCTTGCTGCTGAATTTTCTTCGCTTC
GACTAGACCAATCTCTGCTC

Downstream 100 bases:

>100_bases
CGATTTATATGCCTGATAGAAAGTAGCATCAACTATAGCAAGGCAGTATCAAGAATCTAGGACAGTAAGATTTGGCAGTA
TTCATCCTTAGTAGCCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MDTLGISTASRAIFLQSKRALAQDFFSCRYRLGKSLFVFKEPLKIQVCWLIRKAIATQCSLHGMWSVVIVLDRN

Sequences:

>Translated_74_residues
MDTLGISTASRAIFLQSKRALAQDFFSCRYRLGKSLFVFKEPLKIQVCWLIRKAIATQCSLHGMWSVVIVLDRN
>Mature_74_residues
MDTLGISTASRAIFLQSKRALAQDFFSCRYRLGKSLFVFKEPLKIQVCWLIRKAIATQCSLHGMWSVVIVLDRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8478; Mature: 8478

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLGISTASRAIFLQSKRALAQDFFSCRYRLGKSLFVFKEPLKIQVCWLIRKAIATQCS
CCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHHHHHHC
LHGMWSVVIVLDRN
CCCEEEEEEEEECC
>Mature Secondary Structure
MDTLGISTASRAIFLQSKRALAQDFFSCRYRLGKSLFVFKEPLKIQVCWLIRKAIATQCS
CCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEHHHHHHHHHHHHHHC
LHGMWSVVIVLDRN
CCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA