| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is cpeZ [H]
Identifier: 124023929
GI number: 124023929
Start: 1980101
End: 1980736
Strand: Reverse
Name: cpeZ [H]
Synonym: P9303_22361
Alternate gene names: 124023929
Gene position: 1980736-1980101 (Counterclockwise)
Preceding gene: 124023930
Following gene: 124023927
Centisome position: 73.83
GC content: 44.65
Gene sequence:
>636_bases ATGAGCAAGGATGAAAACTGCAAGCCTGATCTTGAGGATTTATTTGATGATTTTGCTCATCCAAATCCACAAATCAAAGA AGAAGCTTATTTGAAAATGTCTCGCTACTGGCCTGAGGAGTCAATGCCTAGGCTGCTGGCCAATCTGGATCAGACGGATA TTGAACTTAGAAGAGCATCTGTAAAAGCCCTTGGTGTATTTGGTAGACGCTCCTTGCTCCCTTTGGTGCAGATATTTCAT GCCAGTGAGAATAGAATAGTTCGCACAAGTTGTCTCAAGGCTTTTGTGCAAGTGGCAGTTAAGTTCCCTGGTGAAGCCTT CCCAAAGGAGGCCATGGAGGTTGTCGAATTGGCTCTACAGGATGATATCCCTGAGTTAATACTTACAGTGGTTCCGCTTT TATCTCTTCTCGGCAATCAGGGGTTTCCACTTCTGCTACAGAGTTGCAAAAGTAAGAATATCTTGCTGGCCGCTATTGCA GTAACTGCTCTTGGGGAAGTTGATGTTCCTGCGGCTGAAGCTTGCTTGAAAGAGCTTCAGACGGACGATTTAATTGATGA TTTGTTGCGAGGGAGCGTGATTGATGCTCTCAATACATTGGAGCAACGTAATGCAGGCAATCCCAGTACTCAATAA
Upstream 100 bases:
>100_bases CTGTAAAAGCATTGGGAATCTATTTAATTTGAAGATCTCCACCAAGCTCTTCTGAATTACTCTTATTGCTAGTGACTTGA GATGTGCTGAGCCTACATAC
Downstream 100 bases:
>100_bases TAACTAGCTTTCATCATTATGGCTTTTTAGATCTTCGCTCGAAAGCTGATCAATTGCGAGCTGCAGAATCCTATTGACGC TTTCATCTTGTTCTGCAGAC
Product: bilin biosynthesis protein cpeZ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRYWPEESMPRLLANLDQTDIELRRASVKALGVFGRRSLLPLVQIFH ASENRIVRTSCLKAFVQVAVKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGNQGFPLLLQSCKSKNILLAAIA VTALGEVDVPAAEACLKELQTDDLIDDLLRGSVIDALNTLEQRNAGNPSTQ
Sequences:
>Translated_211_residues MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRYWPEESMPRLLANLDQTDIELRRASVKALGVFGRRSLLPLVQIFH ASENRIVRTSCLKAFVQVAVKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGNQGFPLLLQSCKSKNILLAAIA VTALGEVDVPAAEACLKELQTDDLIDDLLRGSVIDALNTLEQRNAGNPSTQ >Mature_210_residues SKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRYWPEESMPRLLANLDQTDIELRRASVKALGVFGRRSLLPLVQIFHA SENRIVRTSCLKAFVQVAVKFPGEAFPKEAMEVVELALQDDIPELILTVVPLLSLLGNQGFPLLLQSCKSKNILLAAIAV TALGEVDVPAAEACLKELQTDDLIDDLLRGSVIDALNTLEQRNAGNPSTQ
Specific function: Involved in the biosynthesis of bilin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 23367; Mature: 23236
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRYWPEESMPRLLANLDQTDIELRRAS CCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH VKALGVFGRRSLLPLVQIFHASENRIVRTSCLKAFVQVAVKFPGEAFPKEAMEVVELALQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DDIPELILTVVPLLSLLGNQGFPLLLQSCKSKNILLAAIAVTALGEVDVPAAEACLKELQ CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC TDDLIDDLLRGSVIDALNTLEQRNAGNPSTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SKDENCKPDLEDLFDDFAHPNPQIKEEAYLKMSRYWPEESMPRLLANLDQTDIELRRAS CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH VKALGVFGRRSLLPLVQIFHASENRIVRTSCLKAFVQVAVKFPGEAFPKEAMEVVELALQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH DDIPELILTVVPLLSLLGNQGFPLLLQSCKSKNILLAAIAVTALGEVDVPAAEACLKELQ CCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHC TDDLIDDLLRGSVIDALNTLEQRNAGNPSTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8425055 [H]