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The map label for this gene is smf [H]

Identifier: 124023899

GI number: 124023899

Start: 1960384

End: 1961520

Strand: Reverse

Name: smf [H]

Synonym: P9303_22061

Alternate gene names: 124023899

Gene position: 1961520-1960384 (Counterclockwise)

Preceding gene: 124023900

Following gene: 124023898

Centisome position: 73.12

GC content: 57.43

Gene sequence:

>1137_bases
ATGCGTACTATTTTGCTTGTGGAGCGTCGGCATTGGTGGTGGCTTTGGAGCCGCTGTCCAGGGATTGGAGCTGCTCGAAT
GGGAGACCTCGAGGCGCTAGGCAAGGCTCACGAGGTCAGTCTGGCTGAGCTATGGACTTGGCCTGAGGAAAGGTTGCGCA
AGGTGCTCTTCTGGCCGACAGCCTTGTTCAAAGACTTGGGCCTCCACCGCAGCAAGTGGGGAACTTGTCCAAGTGTCGAC
GTGCCGGAGGATGTCTTGATGCCTGTGGATTTGCTTTGGCCGGAAGGGCTTCGTGCCTTGAAGCGCCCTCCTTTGGCGCT
TTTTTGGCAGGGCCGGCAGGAGCTTTTGGGATGCCTTGGGGCCCGTAGGGCGGTAGCAATTGTTGGCACACGACGGCCTT
CGAACCATGGTTTGCGTGTGGCTGAAGCATTGGGTCGTGCTTTGGCACTAGCGGGTTGGCCTGTGATTAGTGGCCTTGCA
GAAGGGATTGATGCGGCTGCCCATCGCGGCTGTTTGGAAGGCGGTGGTGCGCCTGTGGGCGTGCTGGGCACACCTTTGCA
GAAGGTCTATCCCAGGCAGAATGAGGGCCTTCAAGCTCTGGTCGCGGCTCAAGGGCTGCTAGTCACAGAGCAGCCCAGGG
AGACTTTGGTCAAGCGCGGTTGTTTTGCAGCCCGTAATCGCTTATTGGTGGCCTTGGCAAAGGCTGTGGTCGTCGTCGAG
TGCCCCGAGAGAAGTGGAGCCTTGATTACAGCGCGGCGGGCAATAGAGCAGCAATGTCAGCTGTTGGTCGTGCCCGGTGA
TGCAAGGCGATGGTCGGCCCTCGGGAGCAATGCTTTGTTGTTGGATCAGGCTTCCCCTTTGCTAAGCCCTGAAGCTCTTG
TAAAACAACTTGGTACTGGTCCGCTGGCGGTTCATTCTCCTTCGGTTGCTTTTGATTTATCTGGTTCTCGCTCTAGCTCA
CGAGCCGGCCAGCATGGCGATACAGCACTGTTACAGGCCATTGGCGATGGTGCATCCCTGGAGGATTTGATGACCGGTTT
GAATCTGTCTTCGGCGCGCTTGACAGAACAATTGCTTCAGTTGGAGTTGAAGGGTGTTGTGGTGGCAGAGCCTGGTTTGC
ATTGGCGTTTGGCCTAG

Upstream 100 bases:

>100_bases
CTCGAGGCGGCGGGTGCTACGTCAGCCCCCAGAGCCTCTTGCGAGTGCTTTACGGCAACTACAACAGGGGGCCGCGCCGC
GCCTATAAGATCATTGGTTC

Downstream 100 bases:

>100_bases
CCTGTTTCGATGGCATTGCTGGAGATTTGCGCAGCAGAGCTATTGGCCTGGCGTCGTTTGCAGTTGGCTGAAGGAGGCCG
TGCTGTTGATTTTGACTGGT

Product: SMF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRTILLVERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLGLHRSKWGTCPSVD
VPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAIVGTRRPSNHGLRVAEALGRALALAGWPVISGLA
EGIDAAAHRGCLEGGGAPVGVLGTPLQKVYPRQNEGLQALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVE
CPERSGALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHSPSVAFDLSGSRSSS
RAGQHGDTALLQAIGDGASLEDLMTGLNLSSARLTEQLLQLELKGVVVAEPGLHWRLA

Sequences:

>Translated_378_residues
MRTILLVERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLGLHRSKWGTCPSVD
VPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAIVGTRRPSNHGLRVAEALGRALALAGWPVISGLA
EGIDAAAHRGCLEGGGAPVGVLGTPLQKVYPRQNEGLQALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVE
CPERSGALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHSPSVAFDLSGSRSSS
RAGQHGDTALLQAIGDGASLEDLMTGLNLSSARLTEQLLQLELKGVVVAEPGLHWRLA
>Mature_378_residues
MRTILLVERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPTALFKDLGLHRSKWGTCPSVD
VPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLGARRAVAIVGTRRPSNHGLRVAEALGRALALAGWPVISGLA
EGIDAAAHRGCLEGGGAPVGVLGTPLQKVYPRQNEGLQALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVE
CPERSGALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTGPLAVHSPSVAFDLSGSRSSS
RAGQHGDTALLQAIGDGASLEDLMTGLNLSSARLTEQLLQLELKGVVVAEPGLHWRLA

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=304, Percent_Identity=31.9078947368421, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40772; Mature: 40772

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS00064 L_LDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTILLVERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPT
CCEEEEEECCCEEEEEHHCCCCCCCCCCCHHHHCCHHHCHHHHHHCCHHHHHHHHHHHHH
ALFKDLGLHRSKWGTCPSVDVPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLG
HHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHCHHHHHHHCCCCEEEEECCHHHHHHHHC
ARRAVAIVGTRRPSNHGLRVAEALGRALALAGWPVISGLAEGIDAAAHRGCLEGGGAPVG
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCCCC
VLGTPLQKVYPRQNEGLQALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVE
CCCCCHHHHCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
CPERSGALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTG
CCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCC
PLAVHSPSVAFDLSGSRSSSRAGQHGDTALLQAIGDGASLEDLMTGLNLSSARLTEQLLQ
CEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHH
LELKGVVVAEPGLHWRLA
HHHCCEEEECCCCCEECC
>Mature Secondary Structure
MRTILLVERRHWWWLWSRCPGIGAARMGDLEALGKAHEVSLAELWTWPEERLRKVLFWPT
CCEEEEEECCCEEEEEHHCCCCCCCCCCCHHHHCCHHHCHHHHHHCCHHHHHHHHHHHHH
ALFKDLGLHRSKWGTCPSVDVPEDVLMPVDLLWPEGLRALKRPPLALFWQGRQELLGCLG
HHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHCHHHHHHHCCCCEEEEECCHHHHHHHHC
ARRAVAIVGTRRPSNHGLRVAEALGRALALAGWPVISGLAEGIDAAAHRGCLEGGGAPVG
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCCCCCCCC
VLGTPLQKVYPRQNEGLQALVAAQGLLVTEQPRETLVKRGCFAARNRLLVALAKAVVVVE
CCCCCHHHHCCCCCCCHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHEEEEEE
CPERSGALITARRAIEQQCQLLVVPGDARRWSALGSNALLLDQASPLLSPEALVKQLGTG
CCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHCCC
PLAVHSPSVAFDLSGSRSSSRAGQHGDTALLQAIGDGASLEDLMTGLNLSSARLTEQLLQ
CEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHH
LELKGVVVAEPGLHWRLA
HHHCCEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]