| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023887
Identifier: 124023887
GI number: 124023887
Start: 1952672
End: 1953787
Strand: Reverse
Name: 124023887
Synonym: P9303_21941
Alternate gene names: NA
Gene position: 1953787-1952672 (Counterclockwise)
Preceding gene: 124023888
Following gene: 124023878
Centisome position: 72.83
GC content: 39.34
Gene sequence:
>1116_bases ATGAAAACAAACCCTACGGATAAGAATAGACAAAAGTTTAATAAGAGCACCAGTGCACTAAGTAATTGGCCATTCAAAGC AGCCCGTAAAGATGTAAGTAAGCATCCAGTAATGAAATCAAAGGAAGCTTGCTCTAATCGGATGGTAACTATGTTGAGTC AGCAGGAGGAGATGATAGTTGTAGGACTATCAAACCATCTCCAATGCGACAAACGTGAAGCCTTACGTATTGCTCTCCAT GAACTGTGTTTGGCTCCAAATGCTGCTCTAGATAAATGCTATGTATATGCTAAATCAACCAGCAAAGAGCAGGGGCATAC AAGTCGTGATAGGCAAGGCACGCTATCTCTACCTAAAGCAGAGAAGGAACTAGCACAGAAAACTGCTAAACAATTAGAGA TTACAGATAAGGAATTAATTAGACTAGCTGTTATATGGGTAGGCTTGGGTCTAAAGGATGATTCAATTAAGCTAACCAAT ACCAAAAACGTAAGTGAATTAGAGGTACGTAGAGATTGGTCTAGAGCTAACCCAAACAAGAAATCAAGTATTAAGCCTTT ACTAATTGCTCAGCAAAAGGGAATGGAAAAGGCTGAGCAAGAACTAGATGAGAGATTCATAGAAAATGAAATTAGAAACA AAAAAATAAGAGAGTACCTTAAATGTAATCCTGGCTTGAGCTGGGAAGCAGCTAGAATAGAGTTAGAAGGAGGATTAGAT GAGCTTGACGCTCTAGAACAACTTATAAGTCAAGAGGTAGAGAAGGAATCCCTGAATAAACTTGAGGAGAAGATACTACG TTATCAATTAAATGGCTGGGATCTAACTGATCAAGAAGCGAGGCAAGCAGCTGAAATTGAACTAAAAGAAGAGACACCTT TGACTGAGGAGGAGACTGAGCAGCTAGAAAGAGAGTTAGAAGAGATGTCTAGAGAGGAAGATGAGTACAGAAAAAAGAAT CCTGCCAAAAGTAATCGTAAAATACCTCACCCACTTAAATACAAAGTAAGGTCTATGGATGAGCAGTTAAAGGATATAGA TGAGAGAAGAGAGGAGATCATAAAAGCTCAACAACGTAGGTACCGGATAGAAGGATTCTTCGACGACCTGTTCTGA
Upstream 100 bases:
>100_bases CAATCGTCCTTGAACCGCCTCAAGGATCAATCCCACCAAAGCACCACAAGGACGTGGCTGAAGGGCATACAAGGGCCACT TACAAAAGCAATAACAACCA
Downstream 100 bases:
>100_bases AAAGGGTTGCTATTACTCACATCTTGCTCACACCCCTCTACTACGTAGTAGGAGAGACAAACATTTCAAACTCACATGCA AAATCACTCGACCGAATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MKTNPTDKNRQKFNKSTSALSNWPFKAARKDVSKHPVMKSKEACSNRMVTMLSQQEEMIVVGLSNHLQCDKREALRIALH ELCLAPNAALDKCYVYAKSTSKEQGHTSRDRQGTLSLPKAEKELAQKTAKQLEITDKELIRLAVIWVGLGLKDDSIKLTN TKNVSELEVRRDWSRANPNKKSSIKPLLIAQQKGMEKAEQELDERFIENEIRNKKIREYLKCNPGLSWEAARIELEGGLD ELDALEQLISQEVEKESLNKLEEKILRYQLNGWDLTDQEARQAAEIELKEETPLTEEETEQLERELEEMSREEDEYRKKN PAKSNRKIPHPLKYKVRSMDEQLKDIDERREEIIKAQQRRYRIEGFFDDLF
Sequences:
>Translated_371_residues MKTNPTDKNRQKFNKSTSALSNWPFKAARKDVSKHPVMKSKEACSNRMVTMLSQQEEMIVVGLSNHLQCDKREALRIALH ELCLAPNAALDKCYVYAKSTSKEQGHTSRDRQGTLSLPKAEKELAQKTAKQLEITDKELIRLAVIWVGLGLKDDSIKLTN TKNVSELEVRRDWSRANPNKKSSIKPLLIAQQKGMEKAEQELDERFIENEIRNKKIREYLKCNPGLSWEAARIELEGGLD ELDALEQLISQEVEKESLNKLEEKILRYQLNGWDLTDQEARQAAEIELKEETPLTEEETEQLERELEEMSREEDEYRKKN PAKSNRKIPHPLKYKVRSMDEQLKDIDERREEIIKAQQRRYRIEGFFDDLF >Mature_371_residues MKTNPTDKNRQKFNKSTSALSNWPFKAARKDVSKHPVMKSKEACSNRMVTMLSQQEEMIVVGLSNHLQCDKREALRIALH ELCLAPNAALDKCYVYAKSTSKEQGHTSRDRQGTLSLPKAEKELAQKTAKQLEITDKELIRLAVIWVGLGLKDDSIKLTN TKNVSELEVRRDWSRANPNKKSSIKPLLIAQQKGMEKAEQELDERFIENEIRNKKIREYLKCNPGLSWEAARIELEGGLD ELDALEQLISQEVEKESLNKLEEKILRYQLNGWDLTDQEARQAAEIELKEETPLTEEETEQLERELEEMSREEDEYRKKN PAKSNRKIPHPLKYKVRSMDEQLKDIDERREEIIKAQQRRYRIEGFFDDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43254; Mature: 43254
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNPTDKNRQKFNKSTSALSNWPFKAARKDVSKHPVMKSKEACSNRMVTMLSQQEEMIV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEE VGLSNHLQCDKREALRIALHELCLAPNAALDKCYVYAKSTSKEQGHTSRDRQGTLSLPKA EECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHH EKELAQKTAKQLEITDKELIRLAVIWVGLGLKDDSIKLTNTKNVSELEVRRDWSRANPNK HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC KSSIKPLLIAQQKGMEKAEQELDERFIENEIRNKKIREYLKCNPGLSWEAARIELEGGLD CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH ELDALEQLISQEVEKESLNKLEEKILRYQLNGWDLTDQEARQAAEIELKEETPLTEEETE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHH QLERELEEMSREEDEYRKKNPAKSNRKIPHPLKYKVRSMDEQLKDIDERREEIIKAQQRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIEGFFDDLF HHHHHHHHHCC >Mature Secondary Structure MKTNPTDKNRQKFNKSTSALSNWPFKAARKDVSKHPVMKSKEACSNRMVTMLSQQEEMIV CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEE VGLSNHLQCDKREALRIALHELCLAPNAALDKCYVYAKSTSKEQGHTSRDRQGTLSLPKA EECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHH EKELAQKTAKQLEITDKELIRLAVIWVGLGLKDDSIKLTNTKNVSELEVRRDWSRANPNK HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC KSSIKPLLIAQQKGMEKAEQELDERFIENEIRNKKIREYLKCNPGLSWEAARIELEGGLD CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH ELDALEQLISQEVEKESLNKLEEKILRYQLNGWDLTDQEARQAAEIELKEETPLTEEETE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCCCHHHHH QLERELEEMSREEDEYRKKNPAKSNRKIPHPLKYKVRSMDEQLKDIDERREEIIKAQQRR HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRIEGFFDDLF HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA