| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023876
Identifier: 124023876
GI number: 124023876
Start: 1940907
End: 1942373
Strand: Direct
Name: 124023876
Synonym: P9303_21831
Alternate gene names: NA
Gene position: 1940907-1942373 (Clockwise)
Preceding gene: 124023874
Following gene: 124023879
Centisome position: 72.35
GC content: 55.35
Gene sequence:
>1467_bases ATGGCCGGACGCTTAAACCAGCAAAACCAGAGGGTTCGTCCCAACTCCAATGAAGACCAGGTGGTGCAGCAGGTCAAGGA GCATTTCGAACGCACGCTGATCGAAGTAGGCGGCACTGTGGCAGGCAGCGTGGCGGCTCTTGAGCATCAGCCCCATAACA AAGCTCTCAATTACGGCGAGGTCTTCCTGCGCGACAACGTGCCCGTGATGATCTACCTGCTCACCCAAAAGCGTTACAAG GAGGTGAAGCAATTCCTCAGCGTTTGCCTAGATCTGCAAAGCACCACATATCAGACACGCGGGGTGTTCCCCACCAGCTT CGTTGAGGAACAAGGCGAGCTCATTGCTGACTATGGCCAGCGCTCAATCGGCAGGATCACCTCTGTGGACGCAAGCCTTT GGTGGCCCATTTTGTGCTGGCTTTATGTCAAGCGCAGCGGTGACAAAAACTTCGGCACCAACCAAAAGGTCCAACGAGGT GTGCAGCTGATGCTCGATCTCGTGCTGCATCCCACCTTCGAGGGCACTCCAGTTCTATTTGTTCAGGATTGCTCATTCAT GATTGACCGCCCCATGGATGTTTGGGGGGCACCACTTGAAGTGGAAGTACTGCTCTATGCCTGCCTGCGCAGCTGCATCG AGCTGATGGAACTGAGTCGCAAGAATCATGTCAGTCGGCTTCTCGACCAACGTCTCTTACTGACCCGCCAATGGGTGCAT GACCTACGTCAATTCCTGCTCAAGCACTACTGGGTCACCAGCAAGACCATGCAGGTGCTGCGAAGAAGACCCACAGAGCA ATACGGCGACAACCAGCACCAAAACGAGTTCAACGTGCAGCCACAGGTCGTTCCCGACTGGCTTCAAGACTGGCTTGAAA ACCGGGGTGGCTATCTCATCGGCAACATCCGCACCGGACGACCTGACTTTCGTTTTTACAGTCTCGGAAACTCCCTAGCC TGCCTGTTTGGGCTACTGACCGCCCCACAACAGCGCGCTCTGTTCCGACTGGTGCTTCACAACCGACAGCATCTGATGGC TCAGATGCCAATGCGCATCTGTCATCCACCCATGGAAGGGGCGGAATGGCAGAACAAGACAGGTTCAGACCCGAAAAACT GGCCATGGAGCTATCACAACGGCGGACACTGGCCCAGCCTGCTCTGGTTCTTCGGAGCCTCAATCTTGTTACATGAACGG CGTCATCCTGAGGCCGACGTGCTGCTGATGGGTGAAATGCGCGCCCTACTGGAGGAGTGCTACTGGAGCCAATTAAACCA ACTGCCGCGTCAAAAATGGGCCGAATACTTTGATGGACCAACAGGCACCTGGGTAGGACAGCAGTCAAGGACCTACCAGA CCTGGACCATGGTGGGCTTTCTACTTCTCCACCACCTTCTACGCGTCTGCCCCGACGACGTGTTGTGGTTGGATCTCGAC GAACTGCTGCCAACACATGAGGTGTAA
Upstream 100 bases:
>100_bases TACGCAATCTTTTCTCAATCGCTCCCATCTCCATAGTTGCTTCCACTGTTGGTCAAGGCTGCCATCACTAGCGTTTGGCA AATGCATTGCATATCAGTCC
Downstream 100 bases:
>100_bases GCAACAAAAAACCCGGCGTGAAGCCGGGCCCATAGAAGCAAATCTTGACTTTTAAAAACTATTCAGAACAAACCCAGAGT TAGGGACTTGTCGATGGGAA
Product: neutral invertase-like protein
Products: NA
Alternate protein names: Neutral Invertase-Like Protein; Neutral Invertase Like Protein; Plant Neutral Invertase Superfamily; LIM17 Protein
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MAGRLNQQNQRVRPNSNEDQVVQQVKEHFERTLIEVGGTVAGSVAALEHQPHNKALNYGEVFLRDNVPVMIYLLTQKRYK EVKQFLSVCLDLQSTTYQTRGVFPTSFVEEQGELIADYGQRSIGRITSVDASLWWPILCWLYVKRSGDKNFGTNQKVQRG VQLMLDLVLHPTFEGTPVLFVQDCSFMIDRPMDVWGAPLEVEVLLYACLRSCIELMELSRKNHVSRLLDQRLLLTRQWVH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGDNQHQNEFNVQPQVVPDWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CLFGLLTAPQQRALFRLVLHNRQHLMAQMPMRICHPPMEGAEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHER RHPEADVLLMGEMRALLEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTMVGFLLLHHLLRVCPDDVLWLDLD ELLPTHEV
Sequences:
>Translated_488_residues MAGRLNQQNQRVRPNSNEDQVVQQVKEHFERTLIEVGGTVAGSVAALEHQPHNKALNYGEVFLRDNVPVMIYLLTQKRYK EVKQFLSVCLDLQSTTYQTRGVFPTSFVEEQGELIADYGQRSIGRITSVDASLWWPILCWLYVKRSGDKNFGTNQKVQRG VQLMLDLVLHPTFEGTPVLFVQDCSFMIDRPMDVWGAPLEVEVLLYACLRSCIELMELSRKNHVSRLLDQRLLLTRQWVH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGDNQHQNEFNVQPQVVPDWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLA CLFGLLTAPQQRALFRLVLHNRQHLMAQMPMRICHPPMEGAEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHER RHPEADVLLMGEMRALLEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTMVGFLLLHHLLRVCPDDVLWLDLD ELLPTHEV >Mature_487_residues AGRLNQQNQRVRPNSNEDQVVQQVKEHFERTLIEVGGTVAGSVAALEHQPHNKALNYGEVFLRDNVPVMIYLLTQKRYKE VKQFLSVCLDLQSTTYQTRGVFPTSFVEEQGELIADYGQRSIGRITSVDASLWWPILCWLYVKRSGDKNFGTNQKVQRGV QLMLDLVLHPTFEGTPVLFVQDCSFMIDRPMDVWGAPLEVEVLLYACLRSCIELMELSRKNHVSRLLDQRLLLTRQWVHD LRQFLLKHYWVTSKTMQVLRRRPTEQYGDNQHQNEFNVQPQVVPDWLQDWLENRGGYLIGNIRTGRPDFRFYSLGNSLAC LFGLLTAPQQRALFRLVLHNRQHLMAQMPMRICHPPMEGAEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHERR HPEADVLLMGEMRALLEECYWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTMVGFLLLHHLLRVCPDDVLWLDLDE LLPTHEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57048; Mature: 56917
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGRLNQQNQRVRPNSNEDQVVQQVKEHFERTLIEVGGTVAGSVAALEHQPHNKALNYGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC VFLRDNVPVMIYLLTQKRYKEVKQFLSVCLDLQSTTYQTRGVFPTSFVEEQGELIADYGQ EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCC RSIGRITSVDASLWWPILCWLYVKRSGDKNFGTNQKVQRGVQLMLDLVLHPTFEGTPVLF HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VQDCSFMIDRPMDVWGAPLEVEVLLYACLRSCIELMELSRKNHVSRLLDQRLLLTRQWVH EECCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGDNQHQNEFNVQPQVVPDWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACLFGLLTAPQQRALFRLVLHNRQHLMAQMPMRICHPPMEG EEEECCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC AEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHERRHPEADVLLMGEMRALLEEC CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH YWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTMVGFLLLHHLLRVCPDDVLWLDLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHH ELLPTHEV HHCCCCCC >Mature Secondary Structure AGRLNQQNQRVRPNSNEDQVVQQVKEHFERTLIEVGGTVAGSVAALEHQPHNKALNYGE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC VFLRDNVPVMIYLLTQKRYKEVKQFLSVCLDLQSTTYQTRGVFPTSFVEEQGELIADYGQ EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHCC RSIGRITSVDASLWWPILCWLYVKRSGDKNFGTNQKVQRGVQLMLDLVLHPTFEGTPVLF HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEE VQDCSFMIDRPMDVWGAPLEVEVLLYACLRSCIELMELSRKNHVSRLLDQRLLLTRQWVH EECCHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLRQFLLKHYWVTSKTMQVLRRRPTEQYGDNQHQNEFNVQPQVVPDWLQDWLENRGGYLI HHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEE GNIRTGRPDFRFYSLGNSLACLFGLLTAPQQRALFRLVLHNRQHLMAQMPMRICHPPMEG EEEECCCCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCC AEWQNKTGSDPKNWPWSYHNGGHWPSLLWFFGASILLHERRHPEADVLLMGEMRALLEEC CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHH YWSQLNQLPRQKWAEYFDGPTGTWVGQQSRTYQTWTMVGFLLLHHLLRVCPDDVLWLDLD HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHH ELLPTHEV HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA