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The map label for this gene is sle1 [H]

Identifier: 124023865

GI number: 124023865

Start: 1927988

End: 1929487

Strand: Direct

Name: sle1 [H]

Synonym: P9303_21721

Alternate gene names: 124023865

Gene position: 1927988-1929487 (Clockwise)

Preceding gene: 124023864

Following gene: 124023868

Centisome position: 71.87

GC content: 53.93

Gene sequence:

>1500_bases
GTGGAGGCACCTTATCTTTCACCAAACTGTAGAGAGAGATTGATGCGCCGGATCATTGTTAGCGCTCTAGCCCTGACAAC
ACTTCTACCGCTGCCATCCTGGGGTGCCAGCGTCACAGTGAGGCCCGGTGACACCCTTTCGGAGATCGCAACGCGATATC
AGGTATCCCTTCGGGCCTTGATGCGGCTGAACGGCCTAGCCAATGCCGACAACCTCTTCATCGGCCAGACCCTCAAACTG
CCAGGTAGCGCATCAGGCACAGTCACTGCTGGTGCAAGCCGTCACACCGTACGCAGTGGCGAGACCCTCAGCACCATTGC
TGCCCGCTACCGAGTGCGCCAGCAGGATCTCATCGCCCTCAATGGTCTGAGCAATGCCAACAATTTATATATCGGCCAAA
CGTTGAAATTGCCTGGAGCTGCTTCCGGGGCAATCAGAGCTGGAGCCAGTCGTCACACGGTACGCAGTGGCGAAACCCTC
AGCATCATTGCTACCCGCTACCGAGTTCGCCAACAGGATCTCGTCGCCCTCAATGGGCTTGCCAATGCCGATACCTTATT
CATCGGCCAGACCCTCAAACTGCCAGGCAGCTCATCAGGCACAGTCAGAGCTGGCGCCAGTCGTCACACGGTACGCAGTG
GCGAAACCCTCAGCACCATTGCTAGCCGCTACCGAGTTCGCCAACAGGATCTCATGGCCCTAAATGGCCTTGCCAATGCC
AACCATGTCGAACGTGGCCAAACTCTGAAACTGCCCCAGGGTGCGGTCGTTCCCAAACCCAAAGCAGCAGCAAAGAGCAA
ACCTGTAGCCATTAAGGCAAATCCAAATGCCACCTCCCACACCGTGGCTCGAGGGCAAACATTGAGCCAAATCGCTGGGG
CTTATCAAATCCCTGTAGCAACCCTGATCAAGATCAATGGCATCAACAATCCCAACAAGTTATTAGTCGGCAGCAAACTC
GCACTACAGGTCAAACCATTAACAACAACCAAGCCAAAATCCACCACGGCAGTTGCCATCAAACCGACTACAACAACCAC
CGTTAAACCAGCCGTTAAACCAACTGTTAAATCTACGATCAAGCCTGCTGCAAAACCACAAACCAAGCCCAAGTCCACCA
CGGCAGTTGCCATCAAACCAACTGCAAAAACCACCGTTAAACCAACCGTTAAACCAACTGTTAAGTCCACGATCAAACCT
GCTGCAAAACCACAAACCAAGCCCAAATCCACCCAGCAAGTTGCTGTCAAGCCTTCGCAAACGCAATGGCGCACTTACGG
GTCACTTCAAGTGGACTGGGCCAATTGGAAGTTCATGGGAGGAAGCTACGTGGCCCCAACCCTCAACAAAGATGGCAAAG
CCCTTTATCTGGCTGTGAACTGCCCAGCGCGCAAGCTCAATACCACCGGCACGAATGGATCTTGGAAAACTTGGGGTGCT
CCACAGCAGCGCTTTGAGCATGATCTCGTCAAGGATCTCTGCAAAGCCAAAGGCGGCTAA

Upstream 100 bases:

>100_bases
TACAAGGCCAATCTGGCGATGCTCAAAAAGCTGCTGGGATAATCAAGCCGCTTTTTGCAAGGGCATCATTTCGGGATGCT
TGAAAAGGGCTAGCGCATCT

Downstream 100 bases:

>100_bases
GAGCATCGAGGACTGCACTCAGGCCGCATAGTGCAGCGGCCAGGGTTGGCGTAAAAAGCGCCGACCGCTCTCACGTAAAT
AGAGCCGCTGGACGCCATCA

Product: LysM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MEAPYLSPNCRERLMRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIATRYQVSLRALMRLNGLANADNLFIGQTLKL
PGSASGTVTAGASRHTVRSGETLSTIAARYRVRQQDLIALNGLSNANNLYIGQTLKLPGAASGAIRAGASRHTVRSGETL
SIIATRYRVRQQDLVALNGLANADTLFIGQTLKLPGSSSGTVRAGASRHTVRSGETLSTIASRYRVRQQDLMALNGLANA
NHVERGQTLKLPQGAVVPKPKAAAKSKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVATLIKINGINNPNKLLVGSKL
ALQVKPLTTTKPKSTTAVAIKPTTTTTVKPAVKPTVKSTIKPAAKPQTKPKSTTAVAIKPTAKTTVKPTVKPTVKSTIKP
AAKPQTKPKSTQQVAVKPSQTQWRTYGSLQVDWANWKFMGGSYVAPTLNKDGKALYLAVNCPARKLNTTGTNGSWKTWGA
PQQRFEHDLVKDLCKAKGG

Sequences:

>Translated_499_residues
MEAPYLSPNCRERLMRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIATRYQVSLRALMRLNGLANADNLFIGQTLKL
PGSASGTVTAGASRHTVRSGETLSTIAARYRVRQQDLIALNGLSNANNLYIGQTLKLPGAASGAIRAGASRHTVRSGETL
SIIATRYRVRQQDLVALNGLANADTLFIGQTLKLPGSSSGTVRAGASRHTVRSGETLSTIASRYRVRQQDLMALNGLANA
NHVERGQTLKLPQGAVVPKPKAAAKSKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVATLIKINGINNPNKLLVGSKL
ALQVKPLTTTKPKSTTAVAIKPTTTTTVKPAVKPTVKSTIKPAAKPQTKPKSTTAVAIKPTAKTTVKPTVKPTVKSTIKP
AAKPQTKPKSTQQVAVKPSQTQWRTYGSLQVDWANWKFMGGSYVAPTLNKDGKALYLAVNCPARKLNTTGTNGSWKTWGA
PQQRFEHDLVKDLCKAKGG
>Mature_499_residues
MEAPYLSPNCRERLMRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIATRYQVSLRALMRLNGLANADNLFIGQTLKL
PGSASGTVTAGASRHTVRSGETLSTIAARYRVRQQDLIALNGLSNANNLYIGQTLKLPGAASGAIRAGASRHTVRSGETL
SIIATRYRVRQQDLVALNGLANADTLFIGQTLKLPGSSSGTVRAGASRHTVRSGETLSTIASRYRVRQQDLMALNGLANA
NHVERGQTLKLPQGAVVPKPKAAAKSKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVATLIKINGINNPNKLLVGSKL
ALQVKPLTTTKPKSTTAVAIKPTTTTTVKPAVKPTVKSTIKPAAKPQTKPKSTTAVAIKPTAKTTVKPTVKPTVKSTIKP
AAKPQTKPKSTQQVAVKPSQTQWRTYGSLQVDWANWKFMGGSYVAPTLNKDGKALYLAVNCPARKLNTTGTNGSWKTWGA
PQQRFEHDLVKDLCKAKGG

Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division [H]

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Secreted. Cell surface (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17559362, Length=358, Percent_Identity=23.463687150838, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007921
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF05257 CHAP; PF01476 LysM [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 53035; Mature: 53035

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAPYLSPNCRERLMRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIATRYQVSLRAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
MRLNGLANADNLFIGQTLKLPGSASGTVTAGASRHTVRSGETLSTIAARYRVRQQDLIAL
HHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHCCCCEEEE
NGLSNANNLYIGQTLKLPGAASGAIRAGASRHTVRSGETLSIIATRYRVRQQDLVALNGL
ECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEECCCCEEEEEEHHHHHHHHHHEEECCC
ANADTLFIGQTLKLPGSSSGTVRAGASRHTVRSGETLSTIASRYRVRQQDLMALNGLANA
CCCCEEEEEEEEECCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NHVERGQTLKLPQGAVVPKPKAAAKSKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVA
CCCCCCCEEECCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHCCCHHHHHCCCCCCCEE
TLIKINGINNPNKLLVGSKLALQVKPLTTTKPKSTTAVAIKPTTTTTVKPAVKPTVKSTI
EEEEEECCCCCCEEEEECEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHC
KPAAKPQTKPKSTTAVAIKPTAKTTVKPTVKPTVKSTIKPAAKPQTKPKSTQQVAVKPSQ
CCCCCCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCC
TQWRTYGSLQVDWANWKFMGGSYVAPTLNKDGKALYLAVNCPARKLNTTGTNGSWKTWGA
CCEEECCCEEEEECCEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
PQQRFEHDLVKDLCKAKGG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEAPYLSPNCRERLMRRIIVSALALTTLLPLPSWGASVTVRPGDTLSEIATRYQVSLRAL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
MRLNGLANADNLFIGQTLKLPGSASGTVTAGASRHTVRSGETLSTIAARYRVRQQDLIAL
HHHCCCCCCCCEEEEEEEECCCCCCCEEEECCCCCEECCCCHHHHHHHHHHHCCCCEEEE
NGLSNANNLYIGQTLKLPGAASGAIRAGASRHTVRSGETLSIIATRYRVRQQDLVALNGL
ECCCCCCCEEEEEEEECCCCCCCHHHCCCCCCEECCCCEEEEEEHHHHHHHHHHEEECCC
ANADTLFIGQTLKLPGSSSGTVRAGASRHTVRSGETLSTIASRYRVRQQDLMALNGLANA
CCCCEEEEEEEEECCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NHVERGQTLKLPQGAVVPKPKAAAKSKPVAIKANPNATSHTVARGQTLSQIAGAYQIPVA
CCCCCCCEEECCCCCCCCCCCHHCCCCCEEEEECCCCCCCHHHCCCHHHHHCCCCCCCEE
TLIKINGINNPNKLLVGSKLALQVKPLTTTKPKSTTAVAIKPTTTTTVKPAVKPTVKSTI
EEEEEECCCCCCEEEEECEEEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHC
KPAAKPQTKPKSTTAVAIKPTAKTTVKPTVKPTVKSTIKPAAKPQTKPKSTQQVAVKPSQ
CCCCCCCCCCCCCEEEEEECCCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCEEEECCCC
TQWRTYGSLQVDWANWKFMGGSYVAPTLNKDGKALYLAVNCPARKLNTTGTNGSWKTWGA
CCEEECCCEEEEECCEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
PQQRFEHDLVKDLCKAKGG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA