Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023824

Identifier: 124023824

GI number: 124023824

Start: 1895381

End: 1895788

Strand: Direct

Name: 124023824

Synonym: P9303_21311

Alternate gene names: NA

Gene position: 1895381-1895788 (Clockwise)

Preceding gene: 124023821

Following gene: 124023826

Centisome position: 70.65

GC content: 44.61

Gene sequence:

>408_bases
TTGCCCATACACAGTCAGTCGATCGTGAGAGCAGGGCAATTCTCGGCAAACTTTCATCCCGATTTACTGGATGCATTCAG
ATCACGCTGTAAGCAGAAGGGTGAAAAATACACAAAGGTCCTGGAACAATTGGCAACGTTATATCTGCAATCAGAGGGAT
CGATCCTTTTTAATCATGCTGCCTTAGAGCCTGAAGCCAAAAGTCATGGCACAACTGAAAGCATCAAGGCGCAAAATCCT
CTGCTTGAACTAGAGAAAAAAATCAAGAGACTGGAAGAGCAGGGCGAGAAAACTGATTACGCTATCGGTGATGCATTCGA
CAGAATCATGGATTGCGAACGAGTCTTAGCGATAGGCAAATACTCGAAAAGCCATCCAAGCATGAACACATCATTCTCCA
AAAGCTGA

Upstream 100 bases:

>100_bases
GTTGGCTGAGGTTGATCAATCAAAATTTTAAAGCGAAGGATCCCTCACGGCAGCCTCGCCTATACAAAAGAGCCCCTATG
TATAGGCAAGCCTGTTAAAT

Downstream 100 bases:

>100_bases
TTGATTCAGAAAGGCTGAAGCGATTTCTAGCATTATATTAATGCTTCAGCGCCAACGCTCGGGGATCGAAATATTGATTG
GTCAAACGAATAATCCAAAA

Product: tropomyosin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MPIHSQSIVRAGQFSANFHPDLLDAFRSRCKQKGEKYTKVLEQLATLYLQSEGSILFNHAALEPEAKSHGTTESIKAQNP
LLELEKKIKRLEEQGEKTDYAIGDAFDRIMDCERVLAIGKYSKSHPSMNTSFSKS

Sequences:

>Translated_135_residues
MPIHSQSIVRAGQFSANFHPDLLDAFRSRCKQKGEKYTKVLEQLATLYLQSEGSILFNHAALEPEAKSHGTTESIKAQNP
LLELEKKIKRLEEQGEKTDYAIGDAFDRIMDCERVLAIGKYSKSHPSMNTSFSKS
>Mature_134_residues
PIHSQSIVRAGQFSANFHPDLLDAFRSRCKQKGEKYTKVLEQLATLYLQSEGSILFNHAALEPEAKSHGTTESIKAQNPL
LELEKKIKRLEEQGEKTDYAIGDAFDRIMDCERVLAIGKYSKSHPSMNTSFSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15202; Mature: 15071

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIHSQSIVRAGQFSANFHPDLLDAFRSRCKQKGEKYTKVLEQLATLYLQSEGSILFNHA
CCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
ALEPEAKSHGTTESIKAQNPLLELEKKIKRLEEQGEKTDYAIGDAFDRIMDCERVLAIGK
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
YSKSHPSMNTSFSKS
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIHSQSIVRAGQFSANFHPDLLDAFRSRCKQKGEKYTKVLEQLATLYLQSEGSILFNHA
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
ALEPEAKSHGTTESIKAQNPLLELEKKIKRLEEQGEKTDYAIGDAFDRIMDCERVLAIGK
CCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
YSKSHPSMNTSFSKS
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA