| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023821
Identifier: 124023821
GI number: 124023821
Start: 1891477
End: 1893702
Strand: Direct
Name: 124023821
Synonym: P9303_21281
Alternate gene names: NA
Gene position: 1891477-1893702 (Clockwise)
Preceding gene: 124023820
Following gene: 124023824
Centisome position: 70.51
GC content: 39.71
Gene sequence:
>2226_bases ATGGCTTCATCTGAAAAAATTCGATACATCTCATTCTCTGGTGGTGGCTGGAGTTCACACACAGCAAGTTCAGCGTGGAT AAGCGGGGCACTTCAGGCTTTAAGAAACAAAAAAAAGTCTGAAGATGTCGATTTTGATGATCTACTGGGTGGATTGCATG GCGCTGCTGGTAATTCAGGAGGTAGTTGGTTTGTATCGATGCTTGCATATTCAGAAGAATTCAAAGAAGGTCTGAACAAC GTCAACGGTTCAGCGGATTGGTTCTCAAGAGGATATATGGGTCAAGTTAAAGATCAATTTGGTCGTGCTGATGACGACAA TGGAAAACAGCAAATGATCAATGATCTCTCGAGTGAGATCATTGAGGCAATCTTGATGACAAGTTCAAAGATTTCTGATC TTCCTGAAAATTTTAAGAAGTTATTAATTGAATATCTTTCTGCAAAGATAAAGCCTTATGTAAGCGATGCTGTTGAATTG CTACATAATGATTACTACGTAAACATCGCTTCACTTGGCAGTAAAGAGCTAAAGCCAGATTGGTCTGAGGTTACAAAGAA TCTTGTTTATAGTCCTTATGATATGAAAGATCAACTCAATAGACCATTAGGAGAAAATCCAAACAAATGGGCAGAAGGTA AAGACATCATCATCTCTGCATCAATGCCAACAAAAAATGTAATCGTAACAGGAAAAACCTTTGACATAGATAATTTCCTC TCTAGCAGTTCATTCACAGAGAATTTCAACCTCCCAAAAGAAAGTTTCGCCAGCCCAGTCACAATAGAGTTAGATGGTGG ATCTGCTGGCACCTCATGGTTAAAATTTCTAGCCGGGGATCATCAACTATCTTATCTTCAAACTGATATAAGTTGGGACG AAAAAGCATCCAGAGAAGAATCCATGGAAACTTTCCTAGATTCAAAGCTATCAATTATTGATGCTGCAACAATTTCTTCT TCAGCAGCAGGAATGCTCTCTTCAGTAGATTTCGTCAATAAAGCATTGGGTACAAAATTAGATGAAGTAGATTTCCTTAA AGACATAAATCTAGGGCTAGACAGCGATGCTATTGGCAAACTCAGCGATCTATTATCTCCCTACTTAGCAAGATATTTAG ATGGGTTATCAATACCATTAAGTCTTAGCAACTCCGAAGCTTCAGCTGAAATCCCTGCAAGGGATGCTAGCTTACAATCA ATTGCTGAAAGTCAGAGCTATCGCTTAGTAGACGGCGGTTATGTTGACAACACAGCTGTAGCCAATATCGTCAGCTCAAT GCAGGATGAGTACTCCAATGAGCAAGAGTTTTCTATTGCCTTATTTTCAAATTCAACAGGGGGAGACAAGACAATACCAA ATTCACACTTAAACCTAACGGAAGATGTAGCATTACTATTTGGGGACCCTAAAGAAGGCTCAGCAAAAACTTGGGACAAG GGTACCGGATACGGGTTCACAATTAAAACAGTAAGTCCACATATTTTCGACATAAAAGCCTGGGAGAATGTAGATGCTCC AGCATGGTCATATACGTCAGAAAAATACGGAGAAGGCAAAGAAAAAAGATTGCAGTATTATCGTTTAGATGTTGAAACCA TCAGCAATGATGCTTTCAACATTGAAGCTGGCTACAAAGGGGAGCTTCATGTTTTTGTAAATGTCGACAAACAATCCAAT GCAGCACCCGTAGACCTAAGCATGTTTAATGTCTATAGTGAGATGTTCGGCACTACTCAAGATGCAATTCTCAAAGGAGA TCTCATCCATGGGCCTGGAGCCGATTTTCTACTTAATGCATTAGGACTAAATCTGGAAAACAAAGGCAGTTATCAAGCAA GCCTACTAAAAGGTGTCTCGAATGATGATTACATTTCAGGCAGTGATGGTAATGATATTCTCATCGGAAATCATAAGAAG AATAAGCTTACGGGTGGCAGAGGTAGTGATATCTTTAAATACCAAACCATCAGTGACTCCAGACCGGGAGAAGAGTCTCG TGATTTGATCACAGACTTCTCAAGCAGAGAAGAAGACAAAATAGACTTATCTATGATTGAGGCAGACTTATCATTCATTG GATCAGATGAATTTAGTGGCGAAAATGGTGAGGTCAGGTTCTATAATGGCATGCTAATCGTCAATATAAAAGGGGCTTCT GATCCAGAGATGGAGATCCAGCTTGAAGCTGTCAATACCTTCAATCCAGAACACCTGATTTTGTAG
Upstream 100 bases:
>100_bases GCTTTTAATATTGTCTGTTGAGCATAATACTATAACGTCTAGCTAACTTCAGTATCAATATTCAAAGACCCTCAAATTAA ACGGCTCGAGAATCATTGCA
Downstream 100 bases:
>100_bases TTTACTTGACTAATATTAGTTAGCCTACTCAGCAACCTCCTCGAAGGCAAAGGGTTAACGATGTCTTCGCAGAAGCTACA AGAAATACCTCAATTCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MASSEKIRYISFSGGGWSSHTASSAWISGALQALRNKKKSEDVDFDDLLGGLHGAAGNSGGSWFVSMLAYSEEFKEGLNN VNGSADWFSRGYMGQVKDQFGRADDDNGKQQMINDLSSEIIEAILMTSSKISDLPENFKKLLIEYLSAKIKPYVSDAVEL LHNDYYVNIASLGSKELKPDWSEVTKNLVYSPYDMKDQLNRPLGENPNKWAEGKDIIISASMPTKNVIVTGKTFDIDNFL SSSSFTENFNLPKESFASPVTIELDGGSAGTSWLKFLAGDHQLSYLQTDISWDEKASREESMETFLDSKLSIIDAATISS SAAGMLSSVDFVNKALGTKLDEVDFLKDINLGLDSDAIGKLSDLLSPYLARYLDGLSIPLSLSNSEASAEIPARDASLQS IAESQSYRLVDGGYVDNTAVANIVSSMQDEYSNEQEFSIALFSNSTGGDKTIPNSHLNLTEDVALLFGDPKEGSAKTWDK GTGYGFTIKTVSPHIFDIKAWENVDAPAWSYTSEKYGEGKEKRLQYYRLDVETISNDAFNIEAGYKGELHVFVNVDKQSN AAPVDLSMFNVYSEMFGTTQDAILKGDLIHGPGADFLLNALGLNLENKGSYQASLLKGVSNDDYISGSDGNDILIGNHKK NKLTGGRGSDIFKYQTISDSRPGEESRDLITDFSSREEDKIDLSMIEADLSFIGSDEFSGENGEVRFYNGMLIVNIKGAS DPEMEIQLEAVNTFNPEHLIL
Sequences:
>Translated_741_residues MASSEKIRYISFSGGGWSSHTASSAWISGALQALRNKKKSEDVDFDDLLGGLHGAAGNSGGSWFVSMLAYSEEFKEGLNN VNGSADWFSRGYMGQVKDQFGRADDDNGKQQMINDLSSEIIEAILMTSSKISDLPENFKKLLIEYLSAKIKPYVSDAVEL LHNDYYVNIASLGSKELKPDWSEVTKNLVYSPYDMKDQLNRPLGENPNKWAEGKDIIISASMPTKNVIVTGKTFDIDNFL SSSSFTENFNLPKESFASPVTIELDGGSAGTSWLKFLAGDHQLSYLQTDISWDEKASREESMETFLDSKLSIIDAATISS SAAGMLSSVDFVNKALGTKLDEVDFLKDINLGLDSDAIGKLSDLLSPYLARYLDGLSIPLSLSNSEASAEIPARDASLQS IAESQSYRLVDGGYVDNTAVANIVSSMQDEYSNEQEFSIALFSNSTGGDKTIPNSHLNLTEDVALLFGDPKEGSAKTWDK GTGYGFTIKTVSPHIFDIKAWENVDAPAWSYTSEKYGEGKEKRLQYYRLDVETISNDAFNIEAGYKGELHVFVNVDKQSN AAPVDLSMFNVYSEMFGTTQDAILKGDLIHGPGADFLLNALGLNLENKGSYQASLLKGVSNDDYISGSDGNDILIGNHKK NKLTGGRGSDIFKYQTISDSRPGEESRDLITDFSSREEDKIDLSMIEADLSFIGSDEFSGENGEVRFYNGMLIVNIKGAS DPEMEIQLEAVNTFNPEHLIL >Mature_740_residues ASSEKIRYISFSGGGWSSHTASSAWISGALQALRNKKKSEDVDFDDLLGGLHGAAGNSGGSWFVSMLAYSEEFKEGLNNV NGSADWFSRGYMGQVKDQFGRADDDNGKQQMINDLSSEIIEAILMTSSKISDLPENFKKLLIEYLSAKIKPYVSDAVELL HNDYYVNIASLGSKELKPDWSEVTKNLVYSPYDMKDQLNRPLGENPNKWAEGKDIIISASMPTKNVIVTGKTFDIDNFLS SSSFTENFNLPKESFASPVTIELDGGSAGTSWLKFLAGDHQLSYLQTDISWDEKASREESMETFLDSKLSIIDAATISSS AAGMLSSVDFVNKALGTKLDEVDFLKDINLGLDSDAIGKLSDLLSPYLARYLDGLSIPLSLSNSEASAEIPARDASLQSI AESQSYRLVDGGYVDNTAVANIVSSMQDEYSNEQEFSIALFSNSTGGDKTIPNSHLNLTEDVALLFGDPKEGSAKTWDKG TGYGFTIKTVSPHIFDIKAWENVDAPAWSYTSEKYGEGKEKRLQYYRLDVETISNDAFNIEAGYKGELHVFVNVDKQSNA APVDLSMFNVYSEMFGTTQDAILKGDLIHGPGADFLLNALGLNLENKGSYQASLLKGVSNDDYISGSDGNDILIGNHKKN KLTGGRGSDIFKYQTISDSRPGEESRDLITDFSSREEDKIDLSMIEADLSFIGSDEFSGENGEVRFYNGMLIVNIKGASD PEMEIQLEAVNTFNPEHLIL
Specific function: Unknown
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81152; Mature: 81020
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSEKIRYISFSGGGWSSHTASSAWISGALQALRNKKKSEDVDFDDLLGGLHGAAGNSG CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC GSWFVSMLAYSEEFKEGLNNVNGSADWFSRGYMGQVKDQFGRADDDNGKQQMINDLSSEI CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH IEAILMTSSKISDLPENFKKLLIEYLSAKIKPYVSDAVELLHNDYYVNIASLGSKELKPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCCCCC WSEVTKNLVYSPYDMKDQLNRPLGENPNKWAEGKDIIISASMPTKNVIVTGKTFDIDNFL HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCEECHHHHH SSSSFTENFNLPKESFASPVTIELDGGSAGTSWLKFLAGDHQLSYLQTDISWDEKASREE CCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH SMETFLDSKLSIIDAATISSSAAGMLSSVDFVNKALGTKLDEVDFLKDINLGLDSDAIGK HHHHHHHCHHHEEEHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHH LSDLLSPYLARYLDGLSIPLSLSNSEASAEIPARDASLQSIAESQSYRLVDGGYVDNTAV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHH ANIVSSMQDEYSNEQEFSIALFSNSTGGDKTIPNSHLNLTEDVALLFGDPKEGSAKTWDK HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GTGYGFTIKTVSPHIFDIKAWENVDAPAWSYTSEKYGEGKEKRLQYYRLDVETISNDAFN CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHEEEEEEEEHHHHCCCCEE IEAGYKGELHVFVNVDKQSNAAPVDLSMFNVYSEMFGTTQDAILKGDLIHGPGADFLLNA EECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCEECCCCHHHHHHH LGLNLENKGSYQASLLKGVSNDDYISGSDGNDILIGNHKKNKLTGGRGSDIFKYQTISDS HCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC RPGEESRDLITDFSSREEDKIDLSMIEADLSFIGSDEFSGENGEVRFYNGMLIVNIKGAS CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCC DPEMEIQLEAVNTFNPEHLIL CCCEEEEEEEECCCCCCEECC >Mature Secondary Structure ASSEKIRYISFSGGGWSSHTASSAWISGALQALRNKKKSEDVDFDDLLGGLHGAAGNSG CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCC GSWFVSMLAYSEEFKEGLNNVNGSADWFSRGYMGQVKDQFGRADDDNGKQQMINDLSSEI CHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH IEAILMTSSKISDLPENFKKLLIEYLSAKIKPYVSDAVELLHNDYYVNIASLGSKELKPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEECCCCCCCCCC WSEVTKNLVYSPYDMKDQLNRPLGENPNKWAEGKDIIISASMPTKNVIVTGKTFDIDNFL HHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCEECHHHHH SSSSFTENFNLPKESFASPVTIELDGGSAGTSWLKFLAGDHQLSYLQTDISWDEKASREE CCCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH SMETFLDSKLSIIDAATISSSAAGMLSSVDFVNKALGTKLDEVDFLKDINLGLDSDAIGK HHHHHHHCHHHEEEHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHH LSDLLSPYLARYLDGLSIPLSLSNSEASAEIPARDASLQSIAESQSYRLVDGGYVDNTAV HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHH ANIVSSMQDEYSNEQEFSIALFSNSTGGDKTIPNSHLNLTEDVALLFGDPKEGSAKTWDK HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC GTGYGFTIKTVSPHIFDIKAWENVDAPAWSYTSEKYGEGKEKRLQYYRLDVETISNDAFN CCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCHHHCCCHHHEEEEEEEEHHHHCCCCEE IEAGYKGELHVFVNVDKQSNAAPVDLSMFNVYSEMFGTTQDAILKGDLIHGPGADFLLNA EECCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHEECCEECCCCHHHHHHH LGLNLENKGSYQASLLKGVSNDDYISGSDGNDILIGNHKKNKLTGGRGSDIFKYQTISDS HCCCCCCCCCHHHHHHHCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCC RPGEESRDLITDFSSREEDKIDLSMIEADLSFIGSDEFSGENGEVRFYNGMLIVNIKGAS CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEECCCC DPEMEIQLEAVNTFNPEHLIL CCCEEEEEEEECCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA