| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023807
Identifier: 124023807
GI number: 124023807
Start: 1876134
End: 1876445
Strand: Reverse
Name: 124023807
Synonym: P9303_21141
Alternate gene names: NA
Gene position: 1876445-1876134 (Counterclockwise)
Preceding gene: 124023808
Following gene: 124023806
Centisome position: 69.95
GC content: 56.41
Gene sequence:
>312_bases ATGCAGGCCTTGAGGTTGTTGCTTTACAGCCGCAATGGTTGTTGTCTCTGTGAGGGGCTTGAACAACGCCTGCGCGAGCT GGCTTTGGATCAACTCCAGCCACCTTTAACGCTGTGTGTGATCGATATCGATGATGGTGCGACACCCGCCAGTATCCGCG ACCATTACGACTTGCAGGTTCCTGTTTTGGTGTTGGTTGAACTGGAGCAACAGTTTTCGCTAGAGCTGCCGCGGGTGTCG CCGCGGCTTGGGGGGGAAGGACTGTTCAGGTGGTTGCAACAGGCCTGCACCAAGGCGCTTGGATCGGACTAG
Upstream 100 bases:
>100_bases TCCAGCGTCATGGACCATGGCGAGGTGGTTGGCTCACCCTGCGGCGCCTGTCTCGTTGCCATCCTTTTACCCCCTGTGGT TGCGACCCGGTGCCTGATTA
Downstream 100 bases:
>100_bases AACGGCTCCATTCATGGGCGGGCCTGGAATGACCCAGATGCTCCATTCATTGTTGCGGGCTGTAGGACTACCTGTGCCGG AGGGATTGGCGAATCCCTGT
Product: thioredoxin family protein
Products: NA
Alternate protein names: Thioredoxin Family Protein
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MQALRLLLYSRNGCCLCEGLEQRLRELALDQLQPPLTLCVIDIDDGATPASIRDHYDLQVPVLVLVELEQQFSLELPRVS PRLGGEGLFRWLQQACTKALGSD
Sequences:
>Translated_103_residues MQALRLLLYSRNGCCLCEGLEQRLRELALDQLQPPLTLCVIDIDDGATPASIRDHYDLQVPVLVLVELEQQFSLELPRVS PRLGGEGLFRWLQQACTKALGSD >Mature_103_residues MQALRLLLYSRNGCCLCEGLEQRLRELALDQLQPPLTLCVIDIDDGATPASIRDHYDLQVPVLVLVELEQQFSLELPRVS PRLGGEGLFRWLQQACTKALGSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11535; Mature: 11535
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALRLLLYSRNGCCLCEGLEQRLRELALDQLQPPLTLCVIDIDDGATPASIRDHYDLQV CCHHHEEHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVLVLVELEQQFSLELPRVSPRLGGEGLFRWLQQACTKALGSD HHHHEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQALRLLLYSRNGCCLCEGLEQRLRELALDQLQPPLTLCVIDIDDGATPASIRDHYDLQV CCHHHEEHHCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCC PVLVLVELEQQFSLELPRVSPRLGGEGLFRWLQQACTKALGSD HHHHEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA