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The map label for this gene is prtA1 [H]

Identifier: 124023792

GI number: 124023792

Start: 1859890

End: 1861350

Strand: Reverse

Name: prtA1 [H]

Synonym: P9303_20991

Alternate gene names: 124023792

Gene position: 1861350-1859890 (Counterclockwise)

Preceding gene: 124023794

Following gene: 124023790

Centisome position: 69.38

GC content: 40.04

Gene sequence:

>1461_bases
ATGATTTCAATCCTTTATCACCTTTTAAATCCTCAAAATCTTGAGAGAAAGAGCATCTCTAACCGTGGTTATGCTGAATA
CTTAGAGTACGAATCCTGGCTTGATAGTAAGACTTTACCATGGGCGTGGAATTTGGCTGATCATGAAGATCACTTTCATA
AAAATGGCCGTATCAGATTTAATGTATCTGGATGGAATAATGAGCAACTTGCCATACCCCCAGATTCAGATGGTTTGATC
GATGAGTATAGAAATCTTGCTCGAGAAGCATTTAAGCTCTTTGAGGAGAACCTGGGCATAGACTTTGTCGAAACTAATGA
GGAAGATGCCGACATCTTCTTCATCGATAATCATAGGGATGGTGGTTACTGGTCATATACTCCATTAGAGGAAAGAAGTC
TTTACTCCGAGAAGGCTTATCCGGAACACAGCTTTATCAATATTACAGTAGATGACTCGTTATCGGCGAAACTGCATGGT
GGGCTTTTTGCTACATTCATTCATGAGATTGGCCATAGCTTGGGCCTTGGCCATGATGGCAATTACAACTTTGATGACTC
TAACCCTAAAGCTAGTAATTATGAAAATGCGGGCCCATACCTGAACTCATCGCAGCAATCGTCAATGATGTCGTATTTTA
GAGTTCCATCTAAAGACGCATTGAGAAGCTGGGGAGTTGAAATGATTAACCCTAATATTGCTAATGCTCATTTTGAACAT
ACAAATACGCCAATGCCTATTGACTGGTTGGCTTTAGACAACATTTATAAACAGCAAGGATACGGTATATCCAATTCCTT
CAATGGCGATACTCTCTATGGCGCGGATACTTCTATTCCTGCTGAAGTCAGCAACGTTTGGAACCAATTTGCTGATTTTA
TTCATCACAATGCATTTACCATCGTTGATGGCTCGGGTCATGACATCATCGATGTGAGCTTTTCTGGATTTGATCAGACT
ATTGATCTTCGAGCCACTGATCCTAATTCTGATTTTTTATACCCATCAGACGTCAATGGACTTAAAGGTAATCTATACAT
AGCAGCCAATACAGAGATTGAAGAGGCAATTACAGGCTCCGGAAACGATCTTTTGATTGGCAACAAATTCAATAATATCC
TAGATGGAGGATCCGGTTCTGACGAGCTTTGGGGATTTAAAGGGGCGAACACTTTAAAGGCTGGTGATTTTGATGATGTC
ACCGATAAGTTCTATATAAAAGCAAGTAATATGGTTGAACAGTGCGATTTTCTTTTTCAGGTTGACTCTTCTGATAGGAT
TTATATAGACACAAGCGATGATGGACAGATCACCTATCAAGATCATATTGAAGACCCCAATGGTAGCAATTATGTGGGTG
TTGGCATCTTTGTAGATGCTGTTTTAGAGGCTTTAGTCATTAATTCTGGCTTGACTTCAGATCAGGTCAATGATATTACC
AAGGGCGGAGACTTTTACTAG

Upstream 100 bases:

>100_bases
TGACTGTTGTTTAAATTGCTAACACTGAGGCCAGTATGTCTTGACTGTCTTTCATGATTAGGGATATACGGCTATCTATT
TTTAACAGGAACCCAATAGC

Downstream 100 bases:

>100_bases
AAGGATTTAATTCTAGACGCCCTGACATTACTATTATTGACCTCTGCCTTACAGTTTTTTTGAATTCACTGAAAGTTTGC
TGCTGGCAGGCTTTGCATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MISILYHLLNPQNLERKSISNRGYAEYLEYESWLDSKTLPWAWNLADHEDHFHKNGRIRFNVSGWNNEQLAIPPDSDGLI
DEYRNLAREAFKLFEENLGIDFVETNEEDADIFFIDNHRDGGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHG
GLFATFIHEIGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMINPNIANAHFEH
TNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQFADFIHHNAFTIVDGSGHDIIDVSFSGFDQT
IDLRATDPNSDFLYPSDVNGLKGNLYIAANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDV
TDKFYIKASNMVEQCDFLFQVDSSDRIYIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEALVINSGLTSDQVNDIT
KGGDFY

Sequences:

>Translated_486_residues
MISILYHLLNPQNLERKSISNRGYAEYLEYESWLDSKTLPWAWNLADHEDHFHKNGRIRFNVSGWNNEQLAIPPDSDGLI
DEYRNLAREAFKLFEENLGIDFVETNEEDADIFFIDNHRDGGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHG
GLFATFIHEIGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMINPNIANAHFEH
TNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQFADFIHHNAFTIVDGSGHDIIDVSFSGFDQT
IDLRATDPNSDFLYPSDVNGLKGNLYIAANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDV
TDKFYIKASNMVEQCDFLFQVDSSDRIYIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEALVINSGLTSDQVNDIT
KGGDFY
>Mature_486_residues
MISILYHLLNPQNLERKSISNRGYAEYLEYESWLDSKTLPWAWNLADHEDHFHKNGRIRFNVSGWNNEQLAIPPDSDGLI
DEYRNLAREAFKLFEENLGIDFVETNEEDADIFFIDNHRDGGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHG
GLFATFIHEIGHSLGLGHDGNYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMINPNIANAHFEH
TNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQFADFIHHNAFTIVDGSGHDIIDVSFSGFDQT
IDLRATDPNSDFLYPSDVNGLKGNLYIAANTEIEEAITGSGNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDV
TDKFYIKASNMVEQCDFLFQVDSSDRIYIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEALVINSGLTSDQVNDIT
KGGDFY

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018511
- InterPro:   IPR001343
- InterPro:   IPR001818
- InterPro:   IPR016294
- InterPro:   IPR013858
- InterPro:   IPR006026
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00353 HemolysinCabind; PF00413 Peptidase_M10; PF08548 Peptidase_M10_C [H]

EC number: NA

Molecular weight: Translated: 54481; Mature: 54481

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISILYHLLNPQNLERKSISNRGYAEYLEYESWLDSKTLPWAWNLADHEDHFHKNGRIRF
CCEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCEEEE
NVSGWNNEQLAIPPDSDGLIDEYRNLAREAFKLFEENLGIDFVETNEEDADIFFIDNHRD
EECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCC
GGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHGGLFATFIHEIGHSLGLGHDG
CCEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCC
NYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMINPNIANAHFEH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCEECC
TNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQFADFIHHNAFT
CCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEE
IVDGSGHDIIDVSFSGFDQTIDLRATDPNSDFLYPSDVNGLKGNLYIAANTEIEEAITGS
EEECCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCHHHHHCCC
GNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDVTDKFYIKASNMVEQCDFLFQ
CCEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCEEEE
VDSSDRIYIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEALVINSGLTSDQVNDIT
ECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHC
KGGDFY
CCCCCC
>Mature Secondary Structure
MISILYHLLNPQNLERKSISNRGYAEYLEYESWLDSKTLPWAWNLADHEDHFHKNGRIRF
CCEEEEECCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCHHHHCCCCEEEE
NVSGWNNEQLAIPPDSDGLIDEYRNLAREAFKLFEENLGIDFVETNEEDADIFFIDNHRD
EECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEECCCC
GGYWSYTPLEERSLYSEKAYPEHSFINITVDDSLSAKLHGGLFATFIHEIGHSLGLGHDG
CCEEECCCCHHHHHHHHCCCCCCCEEEEEECCCCCCHHCCCHHHHHHHHHHHHHCCCCCC
NYNFDDSNPKASNYENAGPYLNSSQQSSMMSYFRVPSKDALRSWGVEMINPNIANAHFEH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCEEECCCCCCCEECC
TNTPMPIDWLALDNIYKQQGYGISNSFNGDTLYGADTSIPAEVSNVWNQFADFIHHNAFT
CCCCCCEEHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEE
IVDGSGHDIIDVSFSGFDQTIDLRATDPNSDFLYPSDVNGLKGNLYIAANTEIEEAITGS
EEECCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCHHHHHCCC
GNDLLIGNKFNNILDGGSGSDELWGFKGANTLKAGDFDDVTDKFYIKASNMVEQCDFLFQ
CCEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCEEEE
VDSSDRIYIDTSDDGQITYQDHIEDPNGSNYVGVGIFVDAVLEALVINSGLTSDQVNDIT
ECCCCEEEEECCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCHHHHHHC
KGGDFY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA