| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023786
Identifier: 124023786
GI number: 124023786
Start: 1846818
End: 1848551
Strand: Direct
Name: 124023786
Synonym: P9303_20931
Alternate gene names: NA
Gene position: 1846818-1848551 (Clockwise)
Preceding gene: 124023785
Following gene: 124023789
Centisome position: 68.84
GC content: 42.45
Gene sequence:
>1734_bases ATGGTTATCAGGAAATACTCAGGGAATTTTCACTATAACTCGAGCAATTTATGCCCCCGCCCTGAGATAATTAAATCATT AGAGGCACGCTTTAACGATGGCATTAGATCCATGAAATCACTTAAGGCCCTTTCCAAACAAAAAGGCTTTAGACATAGGC ACCCCAATGGTTTTGGGTTGTCTGAAACCGTTGTCGCCGCAGGGGCCAGCATTCTTCTCATTGGAGCTTCTTCTCTAGCA TTACGCTCTACCCAAACATTGGTTGACAGATCTGAAAGTAAAGCCAGCTTGCGCCAAAACACTACAAATGGTCTTAGGCT ATTGAGATCAGAAGTCGAGCGAAGTCTACATATCCTGGTCAATAATAGTGAAGCTATTTCAAATGAACAAACCCGCACAG ACCTTGGTCATAAGCAATACGCAGCCACTCTCAAACAATGTGGGAGCTTGGCGGAAAATCAAACAAAAGCATTTAAACCA GTCTTTGGCATCAAAATGGCTGAGATCGATACTCCAGTAATTTATGGATTTAGCGTTAGTTCAAGTAATAACGGTTATGC CTTAATGAGATGTGGTGCTCCACTTGATCTTGATGGACGTTATAATGATGCCAATGGAATTAGCTCGCTGTTTCTAGCTA AAGCAATTGAAGATATTGGCACCATGGGGTGCTATAAACCTGAAGGCAATTGCGAGCACCCCACAACCCCTGAAGGGGAT ATAAAAGGCCTTAAAGAAATCGTAGAGGATCTTGATGTTGATTTTGAAAAAGATCAAACACCAATACGAAGTTTTATGGA ACCAGCTTTGCGCGTGGAGACTGATCCCACTCGTAAATTGGTCAAATTTATAGATCCAGATCCCAACAATGATCCTAAGA AATTTGAAGAGGATAGTTACCTGGAAACCAAAAGCGGGTCACGGACAATTGCAAAGTACCCCCTCTTCCTTGCGGCCTTC GCTAGAGCCGATAAACGCCTTGAGAACTATGGAAGTGATAGCTTCCACAATGGAACCTATTTTCGTAATGTTCGAAGCAA ACGAGTACGCTTCTTAGTCGATGGTTCAGGCTCGATGAGCGCATGCATTCTTTGGGGTAGTAAAGATTACCCTAGTCAAC CTAGAATATATTGGGCTGAAGTTCTAAATTACAGAGGCAGAACATATAAAAATGTATGGTACAGGTCAAGCCAATATTGT GCATTAACCCGGATGGAATCACTGCAAACGGAACTCAAGCGCCTCATTACATCACTGCCCGAAGACACTAAGATTAGTCT CCAATCCTTTAGTTCGGCAGGGAGTAATAATCACAGAACATGGGAAAAATCAAGCAATGGCTTAGTCAAGATTGGACAGG ATGGATTCCGCGAATCAGCAATTTCATTCGTGAATTCAATGGATAATGGTGACCCCAGGTCTTGGGGTGGGACTTACCCA TGGGAGGGTTTAGATAGCTCTTTTGATGACAATGAAACGGACACCCTATATTTCCTCACTGATGGAAAGCCCAACAAAAG GCGGGATGGAAGCAGCTGGCAAGACTATAATTATGACTCTACAGTTAATCACTATCTAGATCATAATAAAAGAAGAAAGC AAACACTAAAGACGAACACCATTGCCATTGGCCTTGCATCACCATGGATGGAAGACTTATCAACTAAAACCAACGGTAAT TATCTACAGGTTGACAAACATGCCGCTGCAAAGGCATTAAATAATGGTCAATAG
Upstream 100 bases:
>100_bases AGCCTCGATTAAGAACCCGATGCATCGAGCTCGAAGGAAGTGCTCAAATTCACAGCGGAACCTGGAATGACGACACTGGA TTCTGTGACACCAGTTAATC
Downstream 100 bases:
>100_bases TAAAAGATAAATCAGCTCGTTTGATTCAGCTTCAATACAGCCATGAATGCTTCCTGAGGCACATCCACTTTGCCCATGGC CTTCATCCGCTTTTTACCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MVIRKYSGNFHYNSSNLCPRPEIIKSLEARFNDGIRSMKSLKALSKQKGFRHRHPNGFGLSETVVAAGASILLIGASSLA LRSTQTLVDRSESKASLRQNTTNGLRLLRSEVERSLHILVNNSEAISNEQTRTDLGHKQYAATLKQCGSLAENQTKAFKP VFGIKMAEIDTPVIYGFSVSSSNNGYALMRCGAPLDLDGRYNDANGISSLFLAKAIEDIGTMGCYKPEGNCEHPTTPEGD IKGLKEIVEDLDVDFEKDQTPIRSFMEPALRVETDPTRKLVKFIDPDPNNDPKKFEEDSYLETKSGSRTIAKYPLFLAAF ARADKRLENYGSDSFHNGTYFRNVRSKRVRFLVDGSGSMSACILWGSKDYPSQPRIYWAEVLNYRGRTYKNVWYRSSQYC ALTRMESLQTELKRLITSLPEDTKISLQSFSSAGSNNHRTWEKSSNGLVKIGQDGFRESAISFVNSMDNGDPRSWGGTYP WEGLDSSFDDNETDTLYFLTDGKPNKRRDGSSWQDYNYDSTVNHYLDHNKRRKQTLKTNTIAIGLASPWMEDLSTKTNGN YLQVDKHAAAKALNNGQ
Sequences:
>Translated_577_residues MVIRKYSGNFHYNSSNLCPRPEIIKSLEARFNDGIRSMKSLKALSKQKGFRHRHPNGFGLSETVVAAGASILLIGASSLA LRSTQTLVDRSESKASLRQNTTNGLRLLRSEVERSLHILVNNSEAISNEQTRTDLGHKQYAATLKQCGSLAENQTKAFKP VFGIKMAEIDTPVIYGFSVSSSNNGYALMRCGAPLDLDGRYNDANGISSLFLAKAIEDIGTMGCYKPEGNCEHPTTPEGD IKGLKEIVEDLDVDFEKDQTPIRSFMEPALRVETDPTRKLVKFIDPDPNNDPKKFEEDSYLETKSGSRTIAKYPLFLAAF ARADKRLENYGSDSFHNGTYFRNVRSKRVRFLVDGSGSMSACILWGSKDYPSQPRIYWAEVLNYRGRTYKNVWYRSSQYC ALTRMESLQTELKRLITSLPEDTKISLQSFSSAGSNNHRTWEKSSNGLVKIGQDGFRESAISFVNSMDNGDPRSWGGTYP WEGLDSSFDDNETDTLYFLTDGKPNKRRDGSSWQDYNYDSTVNHYLDHNKRRKQTLKTNTIAIGLASPWMEDLSTKTNGN YLQVDKHAAAKALNNGQ >Mature_577_residues MVIRKYSGNFHYNSSNLCPRPEIIKSLEARFNDGIRSMKSLKALSKQKGFRHRHPNGFGLSETVVAAGASILLIGASSLA LRSTQTLVDRSESKASLRQNTTNGLRLLRSEVERSLHILVNNSEAISNEQTRTDLGHKQYAATLKQCGSLAENQTKAFKP VFGIKMAEIDTPVIYGFSVSSSNNGYALMRCGAPLDLDGRYNDANGISSLFLAKAIEDIGTMGCYKPEGNCEHPTTPEGD IKGLKEIVEDLDVDFEKDQTPIRSFMEPALRVETDPTRKLVKFIDPDPNNDPKKFEEDSYLETKSGSRTIAKYPLFLAAF ARADKRLENYGSDSFHNGTYFRNVRSKRVRFLVDGSGSMSACILWGSKDYPSQPRIYWAEVLNYRGRTYKNVWYRSSQYC ALTRMESLQTELKRLITSLPEDTKISLQSFSSAGSNNHRTWEKSSNGLVKIGQDGFRESAISFVNSMDNGDPRSWGGTYP WEGLDSSFDDNETDTLYFLTDGKPNKRRDGSSWQDYNYDSTVNHYLDHNKRRKQTLKTNTIAIGLASPWMEDLSTKTNGN YLQVDKHAAAKALNNGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64782; Mature: 64782
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRKYSGNFHYNSSNLCPRPEIIKSLEARFNDGIRSMKSLKALSKQKGFRHRHPNGFGL CEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SETVVAAGASILLIGASSLALRSTQTLVDRSESKASLRQNTTNGLRLLRSEVERSLHILV HHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEE NNSEAISNEQTRTDLGHKQYAATLKQCGSLAENQTKAFKPVFGIKMAEIDTPVIYGFSVS CCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEEECCCCEEEEEEEC SSNNGYALMRCGAPLDLDGRYNDANGISSLFLAKAIEDIGTMGCYKPEGNCEHPTTPEGD CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH IKGLKEIVEDLDVDFEKDQTPIRSFMEPALRVETDPTRKLVKFIDPDPNNDPKKFEEDSY HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC LETKSGSRTIAKYPLFLAAFARADKRLENYGSDSFHNGTYFRNVRSKRVRFLVDGSGSMS EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEEECCCCCE ACILWGSKDYPSQPRIYWAEVLNYRGRTYKNVWYRSSQYCALTRMESLQTELKRLITSLP EEEEECCCCCCCCCCCHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC EDTKISLQSFSSAGSNNHRTWEKSSNGLVKIGQDGFRESAISFVNSMDNGDPRSWGGTYP CCCEEHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC WEGLDSSFDDNETDTLYFLTDGKPNKRRDGSSWQDYNYDSTVNHYLDHNKRRKQTLKTNT CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCE IAIGLASPWMEDLSTKTNGNYLQVDKHAAAKALNNGQ EEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHCCCC >Mature Secondary Structure MVIRKYSGNFHYNSSNLCPRPEIIKSLEARFNDGIRSMKSLKALSKQKGFRHRHPNGFGL CEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH SETVVAAGASILLIGASSLALRSTQTLVDRSESKASLRQNTTNGLRLLRSEVERSLHILV HHHHHHCCCEEEEEECCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCEEEEE NNSEAISNEQTRTDLGHKQYAATLKQCGSLAENQTKAFKPVFGIKMAEIDTPVIYGFSVS CCCHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHCEEEEECCCCEEEEEEEC SSNNGYALMRCGAPLDLDGRYNDANGISSLFLAKAIEDIGTMGCYKPEGNCEHPTTPEGD CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH IKGLKEIVEDLDVDFEKDQTPIRSFMEPALRVETDPTRKLVKFIDPDPNNDPKKFEEDSY HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC LETKSGSRTIAKYPLFLAAFARADKRLENYGSDSFHNGTYFRNVRSKRVRFLVDGSGSMS EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCEEEEEEECCCCCE ACILWGSKDYPSQPRIYWAEVLNYRGRTYKNVWYRSSQYCALTRMESLQTELKRLITSLP EEEEECCCCCCCCCCCHHHHHHHCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC EDTKISLQSFSSAGSNNHRTWEKSSNGLVKIGQDGFRESAISFVNSMDNGDPRSWGGTYP CCCEEHHHHHHCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCC WEGLDSSFDDNETDTLYFLTDGKPNKRRDGSSWQDYNYDSTVNHYLDHNKRRKQTLKTNT CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCE IAIGLASPWMEDLSTKTNGNYLQVDKHAAAKALNNGQ EEEEECCHHHHHHCCCCCCCEEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA