| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023777
Identifier: 124023777
GI number: 124023777
Start: 1839848
End: 1840420
Strand: Reverse
Name: 124023777
Synonym: P9303_20831
Alternate gene names: NA
Gene position: 1840420-1839848 (Counterclockwise)
Preceding gene: 124023778
Following gene: 124023776
Centisome position: 68.6
GC content: 55.5
Gene sequence:
>573_bases TTGGTGCAGGCCCAGTCTGAGGGCGCAGCCATGAGCCGTTTGTCCTATGCAGCCTCTGCTGAGCAGGGATTCAGTTTGTT GGAGCTGTTGCTGATTCTCTCGATCCTGGCAGTTCTGGCTAGCTTCAGCCTGGTGAATGTTGGTGAGTACCGCCATCGTT TGCAGGTGGATGTTGCTGCTCGACGACTGCAGCTTGGCTTGGAGCGGGCTCGACTGTTTGCTTTAAGTCAGCGGCAGCCT TGCGGGTTGCATGTTTCTGCTGAGGGTTGGCAGAAGCCGCTTGTTAGTGAGTTGCCAGCGTGTGTGTCCTCTCGATTAAG CCTGCAGGAACCATTCGCTGCAGTGCCACTGACTTGGCAGAGCAACTTGCCTCAGCTGATGCGCTTTGCGGCGAATGGTT TGACGTTGGATGGTGGAACTGTTGTTTTGGGCAGCCTTCACAGCCCTTATCGACGCTGTTTGGTGATCAGCCTGCCCTTG GGGGTTAGCCGTGTTGGCCGTTACGACGGCGATCCCCTCGATCCAGCAATTGGTCTTAGCAGTTCACGTTGTTTACCTGA TGAAGCGCTCTAA
Upstream 100 bases:
>100_bases ATGGGGCTGGACTTTGGCTTGAGATTGAGGCTCATCCGCCTAAGGGGTCGCTTGTTGAGCCGCTTCGACGTCGTCAGTTG CTTACGCCCGCGGGGACTGG
Downstream 100 bases:
>100_bases AGGCAATGACGGTTTTGATGGCTTCACCTTGGTGGAGCTGATGCTGGTGATCAGTGTGGTGATGGTGTTTGTTGCGATGG CCCTTGGCGTGATCACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MVQAQSEGAAMSRLSYAASAEQGFSLLELLLILSILAVLASFSLVNVGEYRHRLQVDVAARRLQLGLERARLFALSQRQP CGLHVSAEGWQKPLVSELPACVSSRLSLQEPFAAVPLTWQSNLPQLMRFAANGLTLDGGTVVLGSLHSPYRRCLVISLPL GVSRVGRYDGDPLDPAIGLSSSRCLPDEAL
Sequences:
>Translated_190_residues MVQAQSEGAAMSRLSYAASAEQGFSLLELLLILSILAVLASFSLVNVGEYRHRLQVDVAARRLQLGLERARLFALSQRQP CGLHVSAEGWQKPLVSELPACVSSRLSLQEPFAAVPLTWQSNLPQLMRFAANGLTLDGGTVVLGSLHSPYRRCLVISLPL GVSRVGRYDGDPLDPAIGLSSSRCLPDEAL >Mature_190_residues MVQAQSEGAAMSRLSYAASAEQGFSLLELLLILSILAVLASFSLVNVGEYRHRLQVDVAARRLQLGLERARLFALSQRQP CGLHVSAEGWQKPLVSELPACVSSRLSLQEPFAAVPLTWQSNLPQLMRFAANGLTLDGGTVVLGSLHSPYRRCLVISLPL GVSRVGRYDGDPLDPAIGLSSSRCLPDEAL
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20480; Mature: 20480
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQAQSEGAAMSRLSYAASAEQGFSLLELLLILSILAVLASFSLVNVGEYRHRLQVDVAA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLQLGLERARLFALSQRQPCGLHVSAEGWQKPLVSELPACVSSRLSLQEPFAAVPLTWQ HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH SNLPQLMRFAANGLTLDGGTVVLGSLHSPYRRCLVISLPLGVSRVGRYDGDPLDPAIGLS CCHHHHHHHHHCCCEECCCEEEECCCCCHHHEEEEEECCCCHHHHCCCCCCCCCCCCCCC SSRCLPDEAL CCCCCCCCCC >Mature Secondary Structure MVQAQSEGAAMSRLSYAASAEQGFSLLELLLILSILAVLASFSLVNVGEYRHRLQVDVAA CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLQLGLERARLFALSQRQPCGLHVSAEGWQKPLVSELPACVSSRLSLQEPFAAVPLTWQ HHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH SNLPQLMRFAANGLTLDGGTVVLGSLHSPYRRCLVISLPLGVSRVGRYDGDPLDPAIGLS CCHHHHHHHHHCCCEECCCEEEECCCCCHHHEEEEEECCCCHHHHCCCCCCCCCCCCCCC SSRCLPDEAL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA