| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is resE [H]
Identifier: 124023775
GI number: 124023775
Start: 1837273
End: 1838763
Strand: Reverse
Name: resE [H]
Synonym: P9303_20811
Alternate gene names: 124023775
Gene position: 1838763-1837273 (Counterclockwise)
Preceding gene: 124023776
Following gene: 124023773
Centisome position: 68.54
GC content: 46.68
Gene sequence:
>1491_bases TTGAACGCAAGAGGGGCCTGGATCAATTTCAGGCATCCGCCTTATTCGATCCGCCGCGTTCTAGAGCGCACCAGCTTGAT GGCTGTGGGGCTGGGATATGGGTTGTTGTTGTTGTTTAACCTGCAGCTTCCAGCTGAACAGCGTAGGCAGGCTCAGCGGG AAGACCTTGACGATGCCAAGGCTATTCTTCGTCAGTCGAAGGATTTGATCCTTCGCGCCGATTCAGTGTCGGCATCTGAA AACAGTATTGATCCACTTTTGCTGAAGAGATTGCTGAGTGATTTTTCATCTTTTCATCTTTTGATTTCGATGCACCCCAA GGGGTTTGAGGCTGGTTTTGTGATGCCTGATGTGAGAGGAGACATCAGTCTTGGCAGGGTTCTATCTTCTTATGGCTTGC AAAAATATCAAGGTGATGCCAAATATGGTCCTGTTCTTATTGATATTGATTCGGCTTATTATTCAATCATTAAAGATGAA ATTGAGCTGCATGGAAATACTTGGAATATTTATCTTGTGCAGGATGTTAGTCGTCAGATTCGCCAGCAAAATATTCTAAC CATCATTCTTATTCTAGCTGCTTTACTTGCTTCGATGGTGACCTTATTCCTCACGCGTACAGGCATTCGACGAGGTTTGG AGCCTTTGCAGCGCTTTGGCGGAGTGATCGAATCAGTCTCGTCTGGAACTCTCGACGATCATCGCTGTGATCCGAAATAT GAACCTGTGGAACTTAAGTCGCTTGCCGGTTCGTTTAATGCGCTTTTAGATCATTTGGCTGATTCTTGGAATCGTCAGAG GAAGTTTGCCAATGCTCTCAGCCATGAACTGCGCACACCGATTACTTTGATTATTGGCTATACCTCCAGGGTTTTGCGCC GATCAGGAAACCTTAGTGAAGATCAGCGGCATCAATTGACGATTATTGATGATGAGACTCGTCGTCTCGGAAGGTTAATC ACTGATCTATTAGATATTGCGCGTGAGGAATCTGGCACTCTGGTGATTACGTCAGAGCCTTTTTCCGCATTTGAGACGTT AGAGCAGGTGCTTTTACTAAACCAAGGTGATCATGAGACTCGCTTGAAAATCCAATCGAGTTCAAACGGTTTTGATCAGA TCTGGGCTCTTGGTGATCACGATAGGGTCGTGCAGTGTCTTAGTAATTTGATTGAGAATGCTTTTAAGTACAGCCCAGAA GACAAGCGAGTTGAATTGAGCTGCAATAGCACGCATGAGCATGTGAGATTGCAAGTTCGTGATCATGGCCCTGGTGTGCC AGAGGCTGATCAGGAGCTGATTTTTGAACAGTTTCAGCGCGGCAGTAACACGGCACAACAACCTGGTAGTGGCGTTGGTC TGGCACTTGTGAGCTCGTTGGTGAAGCGGATGGGAGGCCGCATTTGGGTTGAGAATGCTGCTGATGGTGGAGCGATCTTT GTGATTGAGTTGCAACGTTGTCAGCCGCCTGATCCTGAATACGCCATTTAG
Upstream 100 bases:
>100_bases ATGAATGATCTAGGCCACAGCGTTAGTCGTATAAAACGGCAAAAGTATGCAATGCTAAGCGAAGAGCTCCTGGCTGGACA TTAACCGTCTTGGCAAATCA
Downstream 100 bases:
>100_bases CTTCGGAACTATTCGACAGTGACGACAAGTGATTCACGAATGAACTTCAAAGGTGTTTTCATTAATTAGTGAAGTAAATA GCAAATGTGTACCCTCTCTA
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MNARGAWINFRHPPYSIRRVLERTSLMAVGLGYGLLLLFNLQLPAEQRRQAQREDLDDAKAILRQSKDLILRADSVSASE NSIDPLLLKRLLSDFSSFHLLISMHPKGFEAGFVMPDVRGDISLGRVLSSYGLQKYQGDAKYGPVLIDIDSAYYSIIKDE IELHGNTWNIYLVQDVSRQIRQQNILTIILILAALLASMVTLFLTRTGIRRGLEPLQRFGGVIESVSSGTLDDHRCDPKY EPVELKSLAGSFNALLDHLADSWNRQRKFANALSHELRTPITLIIGYTSRVLRRSGNLSEDQRHQLTIIDDETRRLGRLI TDLLDIAREESGTLVITSEPFSAFETLEQVLLLNQGDHETRLKIQSSSNGFDQIWALGDHDRVVQCLSNLIENAFKYSPE DKRVELSCNSTHEHVRLQVRDHGPGVPEADQELIFEQFQRGSNTAQQPGSGVGLALVSSLVKRMGGRIWVENAADGGAIF VIELQRCQPPDPEYAI
Sequences:
>Translated_496_residues MNARGAWINFRHPPYSIRRVLERTSLMAVGLGYGLLLLFNLQLPAEQRRQAQREDLDDAKAILRQSKDLILRADSVSASE NSIDPLLLKRLLSDFSSFHLLISMHPKGFEAGFVMPDVRGDISLGRVLSSYGLQKYQGDAKYGPVLIDIDSAYYSIIKDE IELHGNTWNIYLVQDVSRQIRQQNILTIILILAALLASMVTLFLTRTGIRRGLEPLQRFGGVIESVSSGTLDDHRCDPKY EPVELKSLAGSFNALLDHLADSWNRQRKFANALSHELRTPITLIIGYTSRVLRRSGNLSEDQRHQLTIIDDETRRLGRLI TDLLDIAREESGTLVITSEPFSAFETLEQVLLLNQGDHETRLKIQSSSNGFDQIWALGDHDRVVQCLSNLIENAFKYSPE DKRVELSCNSTHEHVRLQVRDHGPGVPEADQELIFEQFQRGSNTAQQPGSGVGLALVSSLVKRMGGRIWVENAADGGAIF VIELQRCQPPDPEYAI >Mature_496_residues MNARGAWINFRHPPYSIRRVLERTSLMAVGLGYGLLLLFNLQLPAEQRRQAQREDLDDAKAILRQSKDLILRADSVSASE NSIDPLLLKRLLSDFSSFHLLISMHPKGFEAGFVMPDVRGDISLGRVLSSYGLQKYQGDAKYGPVLIDIDSAYYSIIKDE IELHGNTWNIYLVQDVSRQIRQQNILTIILILAALLASMVTLFLTRTGIRRGLEPLQRFGGVIESVSSGTLDDHRCDPKY EPVELKSLAGSFNALLDHLADSWNRQRKFANALSHELRTPITLIIGYTSRVLRRSGNLSEDQRHQLTIIDDETRRLGRLI TDLLDIAREESGTLVITSEPFSAFETLEQVLLLNQGDHETRLKIQSSSNGFDQIWALGDHDRVVQCLSNLIENAFKYSPE DKRVELSCNSTHEHVRLQVRDHGPGVPEADQELIFEQFQRGSNTAQQPGSGVGLALVSSLVKRMGGRIWVENAADGGAIF VIELQRCQPPDPEYAI
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=321, Percent_Identity=28.0373831775701, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1789149, Length=223, Percent_Identity=31.390134529148, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI1788279, Length=283, Percent_Identity=30.0353356890459, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788393, Length=275, Percent_Identity=29.0909090909091, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=276, Percent_Identity=28.9855072463768, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1786912, Length=231, Percent_Identity=30.3030303030303, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790861, Length=251, Percent_Identity=27.0916334661355, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87081816, Length=282, Percent_Identity=28.0141843971631, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788713, Length=226, Percent_Identity=29.646017699115, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1787374, Length=235, Percent_Identity=28.936170212766, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI87082128, Length=246, Percent_Identity=26.0162601626016, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=26.0089686098655, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790436, Length=234, Percent_Identity=25.6410256410256, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787894, Length=243, Percent_Identity=27.5720164609054, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786837, Length=119, Percent_Identity=36.9747899159664, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1789403, Length=241, Percent_Identity=26.9709543568465, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790551, Length=289, Percent_Identity=22.4913494809689, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55703; Mature: 55703
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNARGAWINFRHPPYSIRRVLERTSLMAVGLGYGLLLLFNLQLPAEQRRQAQREDLDDAK CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHHHHH AILRQSKDLILRADSVSASENSIDPLLLKRLLSDFSSFHLLISMHPKGFEAGFVMPDVRG HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEECCCCCC DISLGRVLSSYGLQKYQGDAKYGPVLIDIDSAYYSIIKDEIELHGNTWNIYLVQDVSRQI CHHHHHHHHHHCHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEEHHHHHHH RQQNILTIILILAALLASMVTLFLTRTGIRRGLEPLQRFGGVIESVSSGTLDDHRCDPKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EPVELKSLAGSFNALLDHLADSWNRQRKFANALSHELRTPITLIIGYTSRVLRRSGNLSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCC DQRHQLTIIDDETRRLGRLITDLLDIAREESGTLVITSEPFSAFETLEQVLLLNQGDHET CCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCE RLKIQSSSNGFDQIWALGDHDRVVQCLSNLIENAFKYSPEDKRVELSCNSTHEHVRLQVR EEEEECCCCCCHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE DHGPGVPEADQELIFEQFQRGSNTAQQPGSGVGLALVSSLVKRMGGRIWVENAADGGAIF CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEE VIELQRCQPPDPEYAI EEEEECCCCCCCCCCC >Mature Secondary Structure MNARGAWINFRHPPYSIRRVLERTSLMAVGLGYGLLLLFNLQLPAEQRRQAQREDLDDAK CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHCCHHHHH AILRQSKDLILRADSVSASENSIDPLLLKRLLSDFSSFHLLISMHPKGFEAGFVMPDVRG HHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCCEECCCCCC DISLGRVLSSYGLQKYQGDAKYGPVLIDIDSAYYSIIKDEIELHGNTWNIYLVQDVSRQI CHHHHHHHHHHCHHHHCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEEEEHHHHHHH RQQNILTIILILAALLASMVTLFLTRTGIRRGLEPLQRFGGVIESVSSGTLDDHRCDPKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EPVELKSLAGSFNALLDHLADSWNRQRKFANALSHELRTPITLIIGYTSRVLRRSGNLSE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCC DQRHQLTIIDDETRRLGRLITDLLDIAREESGTLVITSEPFSAFETLEQVLLLNQGDHET CCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCE RLKIQSSSNGFDQIWALGDHDRVVQCLSNLIENAFKYSPEDKRVELSCNSTHEHVRLQVR EEEEECCCCCCHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE DHGPGVPEADQELIFEQFQRGSNTAQQPGSGVGLALVSSLVKRMGGRIWVENAADGGAIF CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCEEE VIELQRCQPPDPEYAI EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]