| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is ydjZ [C]
Identifier: 124023749
GI number: 124023749
Start: 1809635
End: 1810321
Strand: Direct
Name: ydjZ [C]
Synonym: P9303_20551
Alternate gene names: 124023749
Gene position: 1809635-1810321 (Clockwise)
Preceding gene: 124023746
Following gene: 124023752
Centisome position: 67.46
GC content: 36.1
Gene sequence:
>687_bases ATGGTAGCCCTAATGATTTATATCGCTCAATTTCTAGATGTGTCAACGATAGGAAGTTGGCTAAAAGGTATCGATGGCCG CGTTGAATCGATAGGGCTATGGGCAATAAGCATTATTTTTGCCCTACGATCAATAAGTATAATAATCCCAATACTTCCTG GCACATACTGCTCAGTTCTCTCTGGTTATTTCTTTGGATTCCAACAAGGCTTATTGGTTATTTTCATAGCAGATCTGCTC GCTTGTTGTTCTTGCTTCACCCTTTCCAGGAAGTTTGGCAGAACCGTAATTGAGAAACTCGTAGGCAAGAATCTGATGAA TCGTGTTGAGAATTTCAGCAAAAAACATTTGGAGCAAAACTTTTTTTTAATGACAAGTTTTTTAATGTCGAATTTATTTG ATTTTGTTTGTTATGGCTTAGGACTTACAAAAGTTAAATGGAAAAAGTTTTTACCTGCATTATTATTTAGCATCATAATA TCAGATGCCCCATTTGTCGCAAGTGGATATGCACTAAAACGCCTCGGCGGCATTGAAATTCAAGAAATTATTAATGGGAA TATAAAGGCACTCCAAGGACAACCTCTAACAATATTCATTGCCTCTATCACGTTAATATTTTCTCTGGCAATAATCAATA TGGTCCTACAAAGAAGACAGGATAATATCAAAAGAACAGCCAATTAA
Upstream 100 bases:
>100_bases AGGCATGTAAATGCTATATTTAGTTAGTTAAATCCAGTAGAAAGTGATCAGAATACATCTCAATCGAACGAAATGGTCTT ATTTAATAATCAGCATTCTC
Downstream 100 bases:
>100_bases TGATTATCTCTTAAAGAGAGCATCGTTACAATTGTTTCTTTCAGTGTCTCATTTCGAGACCATCAAGTCAGAACAAGTTT AAGGCTCATTTATAGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN
Sequences:
>Translated_228_residues MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN >Mature_228_residues MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVLSGYFFGFQQGLLVIFIADLL ACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQNFFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIII SDAPFVASGYALKRLGGIEIQEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25481; Mature: 25481
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVL CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SGYFFGFQQGLLVIFIADLLACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIIISDAPFVASGYALKRLGGIEI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCHH QEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVALMIYIAQFLDVSTIGSWLKGIDGRVESIGLWAISIIFALRSISIIIPILPGTYCSVL CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SGYFFGFQQGLLVIFIADLLACCSCFTLSRKFGRTVIEKLVGKNLMNRVENFSKKHLEQN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFLMTSFLMSNLFDFVCYGLGLTKVKWKKFLPALLFSIIISDAPFVASGYALKRLGGIEI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHCCCHH QEIINGNIKALQGQPLTIFIASITLIFSLAIINMVLQRRQDNIKRTAN HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA