| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023736
Identifier: 124023736
GI number: 124023736
Start: 1795934
End: 1796428
Strand: Direct
Name: 124023736
Synonym: P9303_20381
Alternate gene names: NA
Gene position: 1795934-1796428 (Clockwise)
Preceding gene: 124023735
Following gene: 124023738
Centisome position: 66.95
GC content: 48.08
Gene sequence:
>495_bases ATGACACGCCGAACCACTGCACTTGCTGCTGCCCTATCGCTACTACCACTAGGACAACCACTGCTACTGGGATCTACTAC TGCTCTGGCAACTGCGGCGGCGGTCCTTTCAACCCAGGCAGCACATGCTCAAAGTGCCGCTGATTATGTAAATGCAGGTA TTGAGAAAGGTGAAAGTGGTGATTCCCAAGGAGCAATTGCTGATTTCACAAAGGCAATAGAGATTAATCCGCAGTATGCC ATTGCCTACAGCAACCGCGGTTTTGCCAAGAGTAATTCAAAGGATTATCAAGGAGCAATTGCTGATTGCAACAAGGCAAT AGAGATTAATCCGCAGTTTGCCGATGCCTACAACAACCGTGGCATTGCCAAGAGAAAGTTAGGTGATGACAGAGGAGGAT GTGCTGACTACAAGAAGGCAGTCTCTCTTGGACATCAATCAACAGCAAAATGGTTAAACAGCAAAGGTGGTGCCTGGTGC CGCAATATGCGATGA
Upstream 100 bases:
>100_bases CTGGTGCCGCAATATGCGATGAGGTCATCAAACAACAGCACACCCAATAGACCCGATAAGACACCCCCATCTACCCTTTA AGCAGCAGAGCACTTCATTG
Downstream 100 bases:
>100_bases GGGGCATAAAACAACAGCACCTAGTAACCCAATAAGACTTCTCACTTACCCTTAACCCAGCAGCACCCACCAGATGTCTC GCAGAAGAACTGCACTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Peptidase; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Tpr_1 Repeat-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; TPR Domain Containing Protein; Heat Shock Protein DNAJ-Like; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeat- And Protein Kinase Domain-Containing Protein; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; Zn-Dependent Protease; 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; O-Linked GlcNAc Transferase; Periplasmic Protein; Sporulation Domain Protein; TPR Repeat-Containing Lipoprotein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTRRTTALAAALSLLPLGQPLLLGSTTALATAAAVLSTQAAHAQSAADYVNAGIEKGESGDSQGAIADFTKAIEINPQYA IAYSNRGFAKSNSKDYQGAIADCNKAIEINPQFADAYNNRGIAKRKLGDDRGGCADYKKAVSLGHQSTAKWLNSKGGAWC RNMR
Sequences:
>Translated_164_residues MTRRTTALAAALSLLPLGQPLLLGSTTALATAAAVLSTQAAHAQSAADYVNAGIEKGESGDSQGAIADFTKAIEINPQYA IAYSNRGFAKSNSKDYQGAIADCNKAIEINPQFADAYNNRGIAKRKLGDDRGGCADYKKAVSLGHQSTAKWLNSKGGAWC RNMR >Mature_163_residues TRRTTALAAALSLLPLGQPLLLGSTTALATAAAVLSTQAAHAQSAADYVNAGIEKGESGDSQGAIADFTKAIEINPQYAI AYSNRGFAKSNSKDYQGAIADCNKAIEINPQFADAYNNRGIAKRKLGDDRGGCADYKKAVSLGHQSTAKWLNSKGGAWCR NMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17224; Mature: 17093
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRTTALAAALSLLPLGQPLLLGSTTALATAAAVLSTQAAHAQSAADYVNAGIEKGESG CCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DSQGAIADFTKAIEINPQYAIAYSNRGFAKSNSKDYQGAIADCNKAIEINPQFADAYNNR CCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCHHHHHHCCC GIAKRKLGDDRGGCADYKKAVSLGHQSTAKWLNSKGGAWCRNMR CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEECCCC >Mature Secondary Structure TRRTTALAAALSLLPLGQPLLLGSTTALATAAAVLSTQAAHAQSAADYVNAGIEKGESG CCHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DSQGAIADFTKAIEINPQYAIAYSNRGFAKSNSKDYQGAIADCNKAIEINPQFADAYNNR CCCCCHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCEEECCCHHHHHHCCC GIAKRKLGDDRGGCADYKKAVSLGHQSTAKWLNSKGGAWCRNMR CCCHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA