| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023725
Identifier: 124023725
GI number: 124023725
Start: 1783257
End: 1784978
Strand: Reverse
Name: 124023725
Synonym: P9303_20251
Alternate gene names: NA
Gene position: 1784978-1783257 (Counterclockwise)
Preceding gene: 124023729
Following gene: 124023722
Centisome position: 66.54
GC content: 38.04
Gene sequence:
>1722_bases ATGAGCATGCCCTCGTTGCCTGAACAGAGAACTGCTTCTGATTTATACGCGCTAGCGGTAGAAAAGTACAAAAGTGAAGA ATATCAAGAAGCAATAGATGCATTCCGTAAATCACTAGCACTGCAAGAACACTGGAATTCATACCAAGGTCTTGGATGGG GACTATTTTATACAAATCAATGTCAAGAAGCAATAGATGCATTCCGTAAATCACTAGCACTACAAGAAGACTGGAATTCA TACCAAGGTCTTGGATGTGCACTCTTGAGAGAAACAGTATACGCAGAAGCAATAGATGCATTCCGTAAATCACTAGCACT ACAAGAAGACTGGAATTCATACCAAGGTCTTGGATGGGCATTCTTTAGAGCAAACGTATACACACAAGCAATAGATGCAT TCCGTAAATCACTTGCACTGCATGAACATTGGAATGTATACTTAGGTTTAGGACGATCACTATTCAAGACAAACCAATAT CAAGAGGCAATCGAGGCATTCAGAAAAGCGCTTGCACTTAATAATTTAAACTCCAATGAACTAACTGCTGAACTCCACAG AGAACTTGCCGATGCATATGAAGGTGCAGGCAAATCTGATGCTTCAATTGCTTCTTGGGAGGTCTACTTATCTTATCTAG AACCCATCTCATCCCTTGATCCATTCCTTGGAAATAGAGTTATTTACGAGCAAGTGGATCATGAGCAGATAGAAAGAATC AAAAGTACATGTGCTTCTATTGGACTCGACTTTAATCCCTCCCTAAAAGGGGATAATGATGCTTCAATCGAATCATGGAA ATATCTTATGTACTTGCATATACCTAAATGCGGGGGGACTTCATTTGAGACACCCTTGTATTTACTTAAAGAGCACTTAA AAGATAAGTCATGTGATTTGCCTAAAGTTAATAGAACTAACGATTATCTTGCAATAAGCAGATTGGCTTCAAATCATTCG ATTGCAGCATTCACAAATTTGATGTCATCCAATTCTTGTAATGGTTTAAAGAACGCGTTTCTTGGCCTTCACGGTGCCAA ATGGAGTGCTTTGCATGATTACATAGGCGAATTAACCAATGCTTGTCCTAGAATTATTACTACGGTACGTGACCCTCGTC AAAGGTTGTTATCACACATCAAGCATCAAGCGTTTCAATATTGCACCTCAATCGACGACCTTCTTACACTTGTAGATAAT CAAAACAGTATTTTCAATAATTTAATGCATAGACAAATCTTTGATTATGGACTAGACGGCGACAATCCCTGCGGAAACTC TGAACTTGGTAGCGAAAGATTAGACTTGCTCCAAGACATGGATTTTATTGATATATCAGACTCCACTACAAACTCAAAAG TCAAGTCTTCTTTTTTGAGCGCATCTTTATTCCCTAATATTGTTCAAACTTCAAGATTTAATGATTCCAAGGAACGTGAA GAGATGTATGGTTTCAAGATAAGTGGCAACGACATTCAATATATTTTCAAGCATTGTGTGGACAAAGGTTTTCTGGAGAA GGATCAGTCTATTGACTATGATTTTTTAAAAAATAGAACCCTTGAAAGATTGCATTTCCCTTCATTCATGGAGGCGCATA CCTGTTATATTCACCCCTTGACATTTGTCATTTTTGGTATGAACAGATATTCTATTGTTACCACTAAAAAGTTTCTAGAT AATCCTCACCATCTGCTTCAGGAACTCAATCAATCGCTTTAA
Upstream 100 bases:
>100_bases CTTGTCCTGGACTTGAGGACATCCGAAGCGGGTGCCCTTCTTAATGCCTTGTTGTTGCTGCCAGACAGGAAAGAATGTCC CTTCCCTAAGATGAAGTCAT
Downstream 100 bases:
>100_bases ACCCTTTCATACTGATGGAAAGGAGGAATCAGCATTTCTAAAATAATAAAATTGACTTAATCGCGTAATGACCATTGTAA TCAAGGCAACCATTTCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S1 And S6 Chymotrypsin/Hap
Number of amino acids: Translated: 573; Mature: 572
Protein sequence:
>573_residues MSMPSLPEQRTASDLYALAVEKYKSEEYQEAIDAFRKSLALQEHWNSYQGLGWGLFYTNQCQEAIDAFRKSLALQEDWNS YQGLGCALLRETVYAEAIDAFRKSLALQEDWNSYQGLGWAFFRANVYTQAIDAFRKSLALHEHWNVYLGLGRSLFKTNQY QEAIEAFRKALALNNLNSNELTAELHRELADAYEGAGKSDASIASWEVYLSYLEPISSLDPFLGNRVIYEQVDHEQIERI KSTCASIGLDFNPSLKGDNDASIESWKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDLPKVNRTNDYLAISRLASNHS IAAFTNLMSSNSCNGLKNAFLGLHGAKWSALHDYIGELTNACPRIITTVRDPRQRLLSHIKHQAFQYCTSIDDLLTLVDN QNSIFNNLMHRQIFDYGLDGDNPCGNSELGSERLDLLQDMDFIDISDSTTNSKVKSSFLSASLFPNIVQTSRFNDSKERE EMYGFKISGNDIQYIFKHCVDKGFLEKDQSIDYDFLKNRTLERLHFPSFMEAHTCYIHPLTFVIFGMNRYSIVTTKKFLD NPHHLLQELNQSL
Sequences:
>Translated_573_residues MSMPSLPEQRTASDLYALAVEKYKSEEYQEAIDAFRKSLALQEHWNSYQGLGWGLFYTNQCQEAIDAFRKSLALQEDWNS YQGLGCALLRETVYAEAIDAFRKSLALQEDWNSYQGLGWAFFRANVYTQAIDAFRKSLALHEHWNVYLGLGRSLFKTNQY QEAIEAFRKALALNNLNSNELTAELHRELADAYEGAGKSDASIASWEVYLSYLEPISSLDPFLGNRVIYEQVDHEQIERI KSTCASIGLDFNPSLKGDNDASIESWKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDLPKVNRTNDYLAISRLASNHS IAAFTNLMSSNSCNGLKNAFLGLHGAKWSALHDYIGELTNACPRIITTVRDPRQRLLSHIKHQAFQYCTSIDDLLTLVDN QNSIFNNLMHRQIFDYGLDGDNPCGNSELGSERLDLLQDMDFIDISDSTTNSKVKSSFLSASLFPNIVQTSRFNDSKERE EMYGFKISGNDIQYIFKHCVDKGFLEKDQSIDYDFLKNRTLERLHFPSFMEAHTCYIHPLTFVIFGMNRYSIVTTKKFLD NPHHLLQELNQSL >Mature_572_residues SMPSLPEQRTASDLYALAVEKYKSEEYQEAIDAFRKSLALQEHWNSYQGLGWGLFYTNQCQEAIDAFRKSLALQEDWNSY QGLGCALLRETVYAEAIDAFRKSLALQEDWNSYQGLGWAFFRANVYTQAIDAFRKSLALHEHWNVYLGLGRSLFKTNQYQ EAIEAFRKALALNNLNSNELTAELHRELADAYEGAGKSDASIASWEVYLSYLEPISSLDPFLGNRVIYEQVDHEQIERIK STCASIGLDFNPSLKGDNDASIESWKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDLPKVNRTNDYLAISRLASNHSI AAFTNLMSSNSCNGLKNAFLGLHGAKWSALHDYIGELTNACPRIITTVRDPRQRLLSHIKHQAFQYCTSIDDLLTLVDNQ NSIFNNLMHRQIFDYGLDGDNPCGNSELGSERLDLLQDMDFIDISDSTTNSKVKSSFLSASLFPNIVQTSRFNDSKEREE MYGFKISGNDIQYIFKHCVDKGFLEKDQSIDYDFLKNRTLERLHFPSFMEAHTCYIHPLTFVIFGMNRYSIVTTKKFLDN PHHLLQELNQSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65555; Mature: 65424
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMPSLPEQRTASDLYALAVEKYKSEEYQEAIDAFRKSLALQEHWNSYQGLGWGLFYTNQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH CQEAIDAFRKSLALQEDWNSYQGLGCALLRETVYAEAIDAFRKSLALQEDWNSYQGLGWA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FFRANVYTQAIDAFRKSLALHEHWNVYLGLGRSLFKTNQYQEAIEAFRKALALNNLNSNE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTAELHRELADAYEGAGKSDASIASWEVYLSYLEPISSLDPFLGNRVIYEQVDHEQIERI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCHHHHHHH KSTCASIGLDFNPSLKGDNDASIESWKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDL HHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC PKVNRTNDYLAISRLASNHSIAAFTNLMSSNSCNGLKNAFLGLHGAKWSALHDYIGELTN CCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH ACPRIITTVRDPRQRLLSHIKHQAFQYCTSIDDLLTLVDNQNSIFNNLMHRQIFDYGLDG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC DNPCGNSELGSERLDLLQDMDFIDISDSTTNSKVKSSFLSASLFPNIVQTSRFNDSKERE CCCCCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EMYGFKISGNDIQYIFKHCVDKGFLEKDQSIDYDFLKNRTLERLHFPSFMEAHTCYIHPL HHCCEEECCCHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHEEHH TFVIFGMNRYSIVTTKKFLDNPHHLLQELNQSL HHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SMPSLPEQRTASDLYALAVEKYKSEEYQEAIDAFRKSLALQEHWNSYQGLGWGLFYTNQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH CQEAIDAFRKSLALQEDWNSYQGLGCALLRETVYAEAIDAFRKSLALQEDWNSYQGLGWA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH FFRANVYTQAIDAFRKSLALHEHWNVYLGLGRSLFKTNQYQEAIEAFRKALALNNLNSNE HHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH LTAELHRELADAYEGAGKSDASIASWEVYLSYLEPISSLDPFLGNRVIYEQVDHEQIERI HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHCCHHHHHHH KSTCASIGLDFNPSLKGDNDASIESWKYLMYLHIPKCGGTSFETPLYLLKEHLKDKSCDL HHHHHHCCCCCCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCC PKVNRTNDYLAISRLASNHSIAAFTNLMSSNSCNGLKNAFLGLHGAKWSALHDYIGELTN CCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH ACPRIITTVRDPRQRLLSHIKHQAFQYCTSIDDLLTLVDNQNSIFNNLMHRQIFDYGLDG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC DNPCGNSELGSERLDLLQDMDFIDISDSTTNSKVKSSFLSASLFPNIVQTSRFNDSKERE CCCCCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH EMYGFKISGNDIQYIFKHCVDKGFLEKDQSIDYDFLKNRTLERLHFPSFMEAHTCYIHPL HHCCEEECCCHHHHHHHHHHCCCHHCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHEEHH TFVIFGMNRYSIVTTKKFLDNPHHLLQELNQSL HHHHCCCCCEEEEEEHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA