| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023713
Identifier: 124023713
GI number: 124023713
Start: 1772738
End: 1773229
Strand: Reverse
Name: 124023713
Synonym: P9303_20131
Alternate gene names: NA
Gene position: 1773229-1772738 (Counterclockwise)
Preceding gene: 124023718
Following gene: 124023712
Centisome position: 66.1
GC content: 52.24
Gene sequence:
>492_bases GTGACAGGCCAAGAAAAGTCCACTAATAAAGGGGTCTCTAGCCTGGTTCAGGGAATCCAGCAACGCTTTCAAGCCTTTCT CGCTAAACCAAGGAGTGCGTCCAAGGCCACGCCAAAGGCTACTGCTAAGCAGCCCAGCAGGACAGAGGATAGGGTCCAGG ATTTCAGCCATGTTTCACTCCAGCCCAAAGACTCAAAATGGGCACGCTGCAGCTGGAGCATCAGCAAAGCCGATCAGCAA CGGGCAAAAAAATCAAAGGCAAAAGCCCTATGTCTGCGGTTGGTCGATCTGTACAGCCACGCCGATGCCTTGATCAGTAG GCATGCCATCAAAGAAATTTTTGTCGACAGTGAGGCTCATGAGTGGTTCCTTCCTGTGCCGATGGGTGGCCGTGACTATC TCCTTGAGCTGGGCTATCAGCTTCCTAAGGGAGGTTGGCTTTCACTAGGCGTTTTCAGAACCGGTATATGTGCCGCAGAG AGATCCTTCTGA
Upstream 100 bases:
>100_bases TGTGGCTGTTCTTTCTCTTGTGTCAGGAGATTCTTGCAATTGCCATTTTGTCAACATCAAATGTAGTATATGAATTGAAT TGTTTTATACCTTCTTTCCT
Downstream 100 bases:
>100_bases GCAGAGTTCTGATTGCTCATATAGCTCTTTCCGCCAGGAGCAAGACTTCGCCTCCCAACCTTTTTCTCCGACTTCGTCTG TTGCTGAAGTTTCTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTGQEKSTNKGVSSLVQGIQQRFQAFLAKPRSASKATPKATAKQPSRTEDRVQDFSHVSLQPKDSKWARCSWSISKADQQ RAKKSKAKALCLRLVDLYSHADALISRHAIKEIFVDSEAHEWFLPVPMGGRDYLLELGYQLPKGGWLSLGVFRTGICAAE RSF
Sequences:
>Translated_163_residues MTGQEKSTNKGVSSLVQGIQQRFQAFLAKPRSASKATPKATAKQPSRTEDRVQDFSHVSLQPKDSKWARCSWSISKADQQ RAKKSKAKALCLRLVDLYSHADALISRHAIKEIFVDSEAHEWFLPVPMGGRDYLLELGYQLPKGGWLSLGVFRTGICAAE RSF >Mature_162_residues TGQEKSTNKGVSSLVQGIQQRFQAFLAKPRSASKATPKATAKQPSRTEDRVQDFSHVSLQPKDSKWARCSWSISKADQQR AKKSKAKALCLRLVDLYSHADALISRHAIKEIFVDSEAHEWFLPVPMGGRDYLLELGYQLPKGGWLSLGVFRTGICAAER SF
Specific function: Unknown
COG id: COG3330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18194; Mature: 18063
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQEKSTNKGVSSLVQGIQQRFQAFLAKPRSASKATPKATAKQPSRTEDRVQDFSHVSL CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC QPKDSKWARCSWSISKADQQRAKKSKAKALCLRLVDLYSHADALISRHAIKEIFVDSEAH CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EWFLPVPMGGRDYLLELGYQLPKGGWLSLGVFRTGICAAERSF CEEECCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCC >Mature Secondary Structure TGQEKSTNKGVSSLVQGIQQRFQAFLAKPRSASKATPKATAKQPSRTEDRVQDFSHVSL CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC QPKDSKWARCSWSISKADQQRAKKSKAKALCLRLVDLYSHADALISRHAIKEIFVDSEAH CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EWFLPVPMGGRDYLLELGYQLPKGGWLSLGVFRTGICAAERSF CEEECCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA