| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023657
Identifier: 124023657
GI number: 124023657
Start: 1721601
End: 1723607
Strand: Reverse
Name: 124023657
Synonym: P9303_19571
Alternate gene names: NA
Gene position: 1723607-1721601 (Counterclockwise)
Preceding gene: 124023658
Following gene: 124023656
Centisome position: 64.25
GC content: 55.71
Gene sequence:
>2007_bases ATGCCAATCGCTGCGCAGCTGGTGGACCTGCCAATTGATCATTTCCGCTTGCTGGGTGTCAGTCCTTCGGCAGACAGTGA GGCGATTTTGCGGGCCTTGGAGTTGAGGTTGGATCGCTGCCCTGACCAAGGTTTCACCCATGAGGTCTTAATTCAGCGGG CAGAATTGTTGCGGCTTTCAGCAGATTTGCTGACCGATCCGCCACGGCGTCAGGCCTATGAGACTGCCTTGTTGGAGCTC AGTCGTGATCACCCAGGCGAGACCGCCGGTCTTGATGTGTCACCTAGTAGAGAGGTGGCAGGGCTGATCTTGTTGTTTGA AGCGAACTCTCCTCATGAGGTCTTTCATCTCGCCTCTCAGGGATTGCAGCCGCCCCAGTCCCCGACGCTAGGTAGCGAAC GAGAAGCTGACCTCGCTTTGTTGTTAGCGCTGGCCTGCCGGGCTGCAGCCGCTGAGGAACAGGAACAACGGCGTTATGAA GCAGCAGCGTCTCTTTTGCATGACGGGATCCAGTTGTTGCAGCGGATCGGCAAGCTCTCCGAAGAGTGCCTCAAGCTTGA GAAAGATTTAGATGTCCTTCTGCCCTATCGCATTCTCGACTTATTGAGTCGGGATCTTGGTGATCAGGTCTCTCACCAGG AAGGACTGCGCCTACTTGACAACTTTGTGAGCCAGAGAGGAGGCCTTGAGGGAACGGTCCCATCGCCTGCACCTGGGGGT CTTGATCAATCCGAATTTGACAACTTCTTCAAGCAGATCAGAAAGTTTTTGACTGTTCAGGAACAGGTTGATCTTTTCCT GCGCTGGCAGCAAGCCGGATCAGCAGATGCGGGTTTCCTTGGTGGGTTGGCTCTTGCTGCGGTTGGATTTTCGCGTCGGA AGCCTGAACGGGTGCAGGAAGCTCGGCAGCACTTAGAGAGTCTTGAACTGGATGGATTCGATCCGTTGCCGATGCTGGGT TGCTTGGACCTCTTGCTCGGAGATGTAGGCCGCGCTCAGGAGCGCTTTCTGCGCAGTACTGATCCTCGAGTGAAGGATTG TCTTGACAGCCACCCTGGCGATGAATTGGCTGCTTTTTGCGAATACTGCCGCTCTTGGCTGGGAGGGGACGTGCTTCCCG GTTATAGGGATGTGGATGCTGAGGCCGTTGATCTGGAGGCTTGGTTTGCTGATCGGGATGTTCAGGCCTATGTGGAACGC CTGGAACGCAGCGAAAATCGTGCTTCGTCTTTAGGTAAGGCCTTCGCAGGATCGTCTTTGAAGCAACCCTTCCCTTGGGC TCCTCTTCATCCCGATGGGATTTTGCCTCTCTCTCTTGGTGGGCCTGAGGTTGGTCAACCTGCAGCTGACCCAAGCTCTG ATGAGTTTGCCAGCGATGGCATTGCATGGATTGATCGTTTAGCAGATCTGCCACGTCAGACGCGGCCGGTGCTGATCGGT TCTGTTGTCTTTGCGGCCCTGATTGCAGCCTTTGCAGGCTTCAGCTTGTTTGGCCAACGTCCTCGTCCTTCAGTCAGCAC GGCTGCTGATCAGCCTCAAGTCACAGCACCTCCTACCGCCACACTGCAAGAGGCGGTCCTCATGCCTCAAGTCCCTGTCA GCGCTGTGGTTGAGCCGCTTACTTTGGAGCAGCCGAATCAGGCACAGCTCAAAGACCTGCTTCAGGCCTGGCTCAGCAAC AAGGCAGTCGTGCTTGCCGGTGGCAAGAGTGATGCTCTGCCTGAGGTCGCAAGAGATCCATTAGTGCAGCGCGTGGCGCA AGAGCGTGCCAGGGATGCTGCTTTAGCTGAGACCCAGAAGGTTGTGGCCAGCATCAGCTCTGTAGAGGTGGTGAGTCGAA CGCCGCAGCGTATTGAGCTGAATGCAGTTGTGACCTATCGCGATCAACGCGTTGATGCTGCCGGCAAGGTTGTTGACCAA ACGCCGCAAAAGGATCTCTCGGTGACTTACATCCTTGGTCGTGATCCCGATCGTTGGCGCCTGCATGAATACATCAGCGG CAAATAA
Upstream 100 bases:
>100_bases GAGGTTTTCTGGCTCATGACAGACGACCGTCATTCGAGTGACGACTGTAATGGTCCGTTGATTAGCAATGGGCAAAATCC CTTCCAATGTCTAGAGTTTT
Downstream 100 bases:
>100_bases TCACTGTTTTGCCTAAGGGCTAGCCATCGCTTTTTACGATGAGCTCAAAGCCCTTGGCACGTAGGCACCATGTTTGAAGA ACTTTCAGCCCGCTTTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 668; Mature: 667
Protein sequence:
>668_residues MPIAAQLVDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLEL SRDHPGETAGLDVSPSREVAGLILLFEANSPHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYE AAASLLHDGIQLLQRIGKLSEECLKLEKDLDVLLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTVPSPAPGG LDQSEFDNFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLESLELDGFDPLPMLG CLDLLLGDVGRAQERFLRSTDPRVKDCLDSHPGDELAAFCEYCRSWLGGDVLPGYRDVDAEAVDLEAWFADRDVQAYVER LERSENRASSLGKAFAGSSLKQPFPWAPLHPDGILPLSLGGPEVGQPAADPSSDEFASDGIAWIDRLADLPRQTRPVLIG SVVFAALIAAFAGFSLFGQRPRPSVSTAADQPQVTAPPTATLQEAVLMPQVPVSAVVEPLTLEQPNQAQLKDLLQAWLSN KAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAETQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQ TPQKDLSVTYILGRDPDRWRLHEYISGK
Sequences:
>Translated_668_residues MPIAAQLVDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLEL SRDHPGETAGLDVSPSREVAGLILLFEANSPHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYE AAASLLHDGIQLLQRIGKLSEECLKLEKDLDVLLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTVPSPAPGG LDQSEFDNFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLESLELDGFDPLPMLG CLDLLLGDVGRAQERFLRSTDPRVKDCLDSHPGDELAAFCEYCRSWLGGDVLPGYRDVDAEAVDLEAWFADRDVQAYVER LERSENRASSLGKAFAGSSLKQPFPWAPLHPDGILPLSLGGPEVGQPAADPSSDEFASDGIAWIDRLADLPRQTRPVLIG SVVFAALIAAFAGFSLFGQRPRPSVSTAADQPQVTAPPTATLQEAVLMPQVPVSAVVEPLTLEQPNQAQLKDLLQAWLSN KAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAETQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQ TPQKDLSVTYILGRDPDRWRLHEYISGK >Mature_667_residues PIAAQLVDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLSADLLTDPPRRQAYETALLELS RDHPGETAGLDVSPSREVAGLILLFEANSPHEVFHLASQGLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEA AASLLHDGIQLLQRIGKLSEECLKLEKDLDVLLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTVPSPAPGGL DQSEFDNFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQEARQHLESLELDGFDPLPMLGC LDLLLGDVGRAQERFLRSTDPRVKDCLDSHPGDELAAFCEYCRSWLGGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERL ERSENRASSLGKAFAGSSLKQPFPWAPLHPDGILPLSLGGPEVGQPAADPSSDEFASDGIAWIDRLADLPRQTRPVLIGS VVFAALIAAFAGFSLFGQRPRPSVSTAADQPQVTAPPTATLQEAVLMPQVPVSAVVEPLTLEQPNQAQLKDLLQAWLSNK AVVLAGGKSDALPEVARDPLVQRVAQERARDAALAETQKVVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQT PQKDLSVTYILGRDPDRWRLHEYISGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73055; Mature: 72924
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAAQLVDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLS CCCHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ADLLTDPPRRQAYETALLELSRDHPGETAGLDVSPSREVAGLILLFEANSPHEVFHLASQ HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH GLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLHDGIQLLQRIGKLS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EECLKLEKDLDVLLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTVPSPAPGG HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LDQSEFDNFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH ARQHLESLELDGFDPLPMLGCLDLLLGDVGRAQERFLRSTDPRVKDCLDSHPGDELAAFC HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHH EYCRSWLGGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENRASSLGKAFAGSSL HHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC KQPFPWAPLHPDGILPLSLGGPEVGQPAADPSSDEFASDGIAWIDRLADLPRQTRPVLIG CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCHHHH SVVFAALIAAFAGFSLFGQRPRPSVSTAADQPQVTAPPTATLQEAVLMPQVPVSAVVEPL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCC TLEQPNQAQLKDLLQAWLSNKAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAETQK CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLSVTYILGRDPDRWR HHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH LHEYISGK HHHHHCCC >Mature Secondary Structure PIAAQLVDLPIDHFRLLGVSPSADSEAILRALELRLDRCPDQGFTHEVLIQRAELLRLS CCHHHHHHCCHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH ADLLTDPPRRQAYETALLELSRDHPGETAGLDVSPSREVAGLILLFEANSPHEVFHLASQ HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH GLQPPQSPTLGSEREADLALLLALACRAAAAEEQEQRRYEAAASLLHDGIQLLQRIGKLS CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EECLKLEKDLDVLLPYRILDLLSRDLGDQVSHQEGLRLLDNFVSQRGGLEGTVPSPAPGG HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LDQSEFDNFFKQIRKFLTVQEQVDLFLRWQQAGSADAGFLGGLALAAVGFSRRKPERVQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHH ARQHLESLELDGFDPLPMLGCLDLLLGDVGRAQERFLRSTDPRVKDCLDSHPGDELAAFC HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCCHHHHHHH EYCRSWLGGDVLPGYRDVDAEAVDLEAWFADRDVQAYVERLERSENRASSLGKAFAGSSL HHHHHHHCCCCCCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC KQPFPWAPLHPDGILPLSLGGPEVGQPAADPSSDEFASDGIAWIDRLADLPRQTRPVLIG CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHCCCCCCCHHHH SVVFAALIAAFAGFSLFGQRPRPSVSTAADQPQVTAPPTATLQEAVLMPQVPVSAVVEPL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHCCC TLEQPNQAQLKDLLQAWLSNKAVVLAGGKSDALPEVARDPLVQRVAQERARDAALAETQK CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VVASISSVEVVSRTPQRIELNAVVTYRDQRVDAAGKVVDQTPQKDLSVTYILGRDPDRWR HHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHH LHEYISGK HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA