| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is thiS
Identifier: 124023640
GI number: 124023640
Start: 1707805
End: 1708017
Strand: Direct
Name: thiS
Synonym: P9303_19401
Alternate gene names: NA
Gene position: 1707805-1708017 (Clockwise)
Preceding gene: 124023639
Following gene: 124023641
Centisome position: 63.66
GC content: 55.87
Gene sequence:
>213_bases ATGAAACTGATGGTGAATGGTGAAATCAGGGACATCGAGCCAGAACCGATGCCAACCTCGCTGGCGGCCGTGATCGAACA GCTGGGCTACCACCCTCGCCTTGTCGTTGTGGAGTTCAACGGCACGATCCTGACACCAAATCACTGGCAGGAGCAGCTGG TGCAGGAGATGGACCAACTTGAAATCGTCACTATCGTCGGCGGAGGTTCCTAG
Upstream 100 bases:
>100_bases CAGTACGTCAAGCCGGAGCAAAGCGAATCGCTGTGATCGGAGCGATCATGAATTCCAAAGATCCTGCCGCTACCAGCCTT CAACTACTGGAGGCTCTGAG
Downstream 100 bases:
>100_bases AGTTCAGACCAACCGCCGCAACGTTTTGGCCAGCTTGCCAAACCTTCCCTCCAGACGCACGCTCAGCCGCTGGCTGACGG CTCTATTTCTGCCGCTCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfur Transfer Protein; Sulfur Transfer Protein Involved In Thiamine Biosynthesis; ThiS Thiamine-Biosynthesis
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MKLMVNGEIRDIEPEPMPTSLAAVIEQLGYHPRLVVVEFNGTILTPNHWQEQLVQEMDQLEIVTIVGGGS
Sequences:
>Translated_70_residues MKLMVNGEIRDIEPEPMPTSLAAVIEQLGYHPRLVVVEFNGTILTPNHWQEQLVQEMDQLEIVTIVGGGS >Mature_70_residues MKLMVNGEIRDIEPEPMPTSLAAVIEQLGYHPRLVVVEFNGTILTPNHWQEQLVQEMDQLEIVTIVGGGS
Specific function: Unknown
COG id: COG2104
COG function: function code H; Sulfur transfer protein involved in thiamine biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7813; Mature: 7813
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMVNGEIRDIEPEPMPTSLAAVIEQLGYHPRLVVVEFNGTILTPNHWQEQLVQEMDQL CEEEECCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHCCE EIVTIVGGGS EEEEEEECCC >Mature Secondary Structure MKLMVNGEIRDIEPEPMPTSLAAVIEQLGYHPRLVVVEFNGTILTPNHWQEQLVQEMDQL CEEEECCCEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEECCCHHHHHHHHHHCCE EIVTIVGGGS EEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA