| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is thiE
Identifier: 124023639
GI number: 124023639
Start: 1706747
End: 1707808
Strand: Direct
Name: thiE
Synonym: P9303_19391
Alternate gene names: 124023639
Gene position: 1706747-1707808 (Clockwise)
Preceding gene: 124023637
Following gene: 124023640
Centisome position: 63.62
GC content: 54.9
Gene sequence:
>1062_bases ATGAAATCGATGCCTGTCGCCCCGATCGCAGATCTACGTGTGGCTCAGCTGATCGATGCCAACCTCGATCGAGCTCGAGA AGGACTGCGAGTCGTCGAAGACTGGTGCCGCTTCGGCCTAGATCGTGAAGACCTTGTGGTGACTCTCAAAGACTGGCGTC AGCGACTGGGTCGCCATCATCACGACAGCTACAAACAGGCACGCTCCACTGCTACAGATCAAGGGATCGGCCTCAGTCAT CCTGCTCAGCAAGAGCGACACGAACCATGGCATGTTGTGGCAGCCAACTGTGCACGCGTTCAAGAAGCTCTACGCGTACT GGAAGAGTTCGCCCGTCAGCCAGATCCTCAGCTGGCTGCCAGCGCTGCTGCAATCCGCTATGGCCTCTACGACCTAGAGG TGACCGTGCTGCAGGCCAACGCAGGCAAAAAGAGACGCCAACAACTGCAGGCCTGCCATCTTTGCCTGATTACGACATCA CAATCCGATCTAGCCAACAACGATCTATTCAGAACAGTGAGCGCAGCACTAGTCGCTGGCATCGACATGGTGCAATACCG CAATAAAGAAGCTAGCGACTTGCAACGACTGACTCAGGCAAAAGAGCTGGCCAGCCTATGCAGAAAGCATGGGGCGCTAT TCATCGTTAATGACCGAATCGACTTAGCCCTTGCAGTGGACGCCGATGGCGTTCATCTCGGCCAGGACGACCTCCCCACA GACGTAGCCAGGGGACTGATCGGCAGCGAACGACTACTGGGTCGAAGCACACAGTTCCTTGCCCAGCTTCAAAAAGCTGA AGCAGAAGGTTGCGACTATCTAGGAGTAGGGCCTGTCAACAGCACAGCCACAAAACCGGAACGACAACCAATTGGGCTTG CCTATGTGAAGGAGGCATCTAAAGCCACCCAGCTACCTTGGTTTGCCATTGGTGGCATCAACATCTCAAACCTAGAAGCA GTACGTCAAGCCGGAGCAAAGCGAATCGCTGTGATCGGAGCGATCATGAATTCCAAAGATCCTGCCGCTACCAGCCTTCA ACTACTGGAGGCTCTGAGATGA
Upstream 100 bases:
>100_bases CCACCTAAAAGAACAACCCCCCAGATCAGAACGTTCATGGTGCTATCTGAACCACTGTTGTCCATGATCGGAATGGGGAT GCAATTGTGCCAAGACTGCC
Downstream 100 bases:
>100_bases AACTGATGGTGAATGGTGAAATCAGGGACATCGAGCCAGAACCGATGCCAACCTCGCTGGCGGCCGTGATCGAACAGCTG GGCTACCACCCTCGCCTTGT
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKSMPVAPIADLRVAQLIDANLDRAREGLRVVEDWCRFGLDREDLVVTLKDWRQRLGRHHHDSYKQARSTATDQGIGLSH PAQQERHEPWHVVAANCARVQEALRVLEEFARQPDPQLAASAAAIRYGLYDLEVTVLQANAGKKRRQQLQACHLCLITTS QSDLANNDLFRTVSAALVAGIDMVQYRNKEASDLQRLTQAKELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPT DVARGLIGSERLLGRSTQFLAQLQKAEAEGCDYLGVGPVNSTATKPERQPIGLAYVKEASKATQLPWFAIGGINISNLEA VRQAGAKRIAVIGAIMNSKDPAATSLQLLEALR
Sequences:
>Translated_353_residues MKSMPVAPIADLRVAQLIDANLDRAREGLRVVEDWCRFGLDREDLVVTLKDWRQRLGRHHHDSYKQARSTATDQGIGLSH PAQQERHEPWHVVAANCARVQEALRVLEEFARQPDPQLAASAAAIRYGLYDLEVTVLQANAGKKRRQQLQACHLCLITTS QSDLANNDLFRTVSAALVAGIDMVQYRNKEASDLQRLTQAKELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPT DVARGLIGSERLLGRSTQFLAQLQKAEAEGCDYLGVGPVNSTATKPERQPIGLAYVKEASKATQLPWFAIGGINISNLEA VRQAGAKRIAVIGAIMNSKDPAATSLQLLEALR >Mature_353_residues MKSMPVAPIADLRVAQLIDANLDRAREGLRVVEDWCRFGLDREDLVVTLKDWRQRLGRHHHDSYKQARSTATDQGIGLSH PAQQERHEPWHVVAANCARVQEALRVLEEFARQPDPQLAASAAAIRYGLYDLEVTVLQANAGKKRRQQLQACHLCLITTS QSDLANNDLFRTVSAALVAGIDMVQYRNKEASDLQRLTQAKELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPT DVARGLIGSERLLGRSTQFLAQLQKAEAEGCDYLGVGPVNSTATKPERQPIGLAYVKEASKATQLPWFAIGGINISNLEA VRQAGAKRIAVIGAIMNSKDPAATSLQLLEALR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=176, Percent_Identity=32.3863636363636, Blast_Score=67, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6325042, Length=222, Percent_Identity=33.7837837837838, Blast_Score=105, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_PROM3 (A2CB21)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001017946.1 - ProteinModelPortal: A2CB21 - SMR: A2CB21 - STRING: A2CB21 - GeneID: 4777528 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_19391 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: EEWCRFG - ProtClustDB: PRK02615 - HAMAP: MF_01327 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR016229 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - PIRSF: PIRSF000512 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 38727; Mature: 38727
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSMPVAPIADLRVAQLIDANLDRAREGLRVVEDWCRFGLDREDLVVTLKDWRQRLGRHH CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHCCCC HDSYKQARSTATDQGIGLSHPAQQERHEPWHVVAANCARVQEALRVLEEFARQPDPQLAA CHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SAAAIRYGLYDLEVTVLQANAGKKRRQQLQACHLCLITTSQSDLANNDLFRTVSAALVAG HHHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHEEEEECCCHHHCCHHHHHHHHHHHHHH IDMVQYRNKEASDLQRLTQAKELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCHH DVARGLIGSERLLGRSTQFLAQLQKAEAEGCDYLGVGPVNSTATKPERQPIGLAYVKEAS HHHHHHCCHHHHHCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHH KATQLPWFAIGGINISNLEAVRQAGAKRIAVIGAIMNSKDPAATSLQLLEALR HHHCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC >Mature Secondary Structure MKSMPVAPIADLRVAQLIDANLDRAREGLRVVEDWCRFGLDREDLVVTLKDWRQRLGRHH CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHEEEHHHHHHHHCCCC HDSYKQARSTATDQGIGLSHPAQQERHEPWHVVAANCARVQEALRVLEEFARQPDPQLAA CHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH SAAAIRYGLYDLEVTVLQANAGKKRRQQLQACHLCLITTSQSDLANNDLFRTVSAALVAG HHHHHHHCEEEEEEEEEECCCCHHHHHHHHHHHEEEEECCCHHHCCHHHHHHHHHHHHHH IDMVQYRNKEASDLQRLTQAKELASLCRKHGALFIVNDRIDLALAVDADGVHLGQDDLPT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCHH DVARGLIGSERLLGRSTQFLAQLQKAEAEGCDYLGVGPVNSTATKPERQPIGLAYVKEAS HHHHHHCCHHHHHCHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHH KATQLPWFAIGGINISNLEAVRQAGAKRIAVIGAIMNSKDPAATSLQLLEALR HHHCCCEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA