| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023636
Identifier: 124023636
GI number: 124023636
Start: 1705030
End: 1705593
Strand: Reverse
Name: 124023636
Synonym: P9303_19361
Alternate gene names: NA
Gene position: 1705593-1705030 (Counterclockwise)
Preceding gene: 124023638
Following gene: 124023634
Centisome position: 63.58
GC content: 52.13
Gene sequence:
>564_bases ATGGCTGACCCTCTCGATCTTCAAATGGTTTCGCTCGGGTTGCGTCGTATGGGATGGATTCGTTTTTGGATACAGACAGT GCTTGGGGTTGTTGTTGTTGGCGTGCTGTTGTTCAACAACATCGGCAGCAGCTTGGCCCGCAACTCGGAGCGAGCACTCG GGCTTGGTCCTGGCTTGTCGCTGACAAGCTTGGCGTTCTTGTTTTTGCTGTACAGCCTTTGGCAGGGTTGGCTGATCGTT CGCCTCGGCAGGGCTCTCAACAGTGCTGTTCGCCCCAGCCGTGGTGAGACTAGTCGTCTGCTCAAACGAGGAGTGATTGT TGATCTGCTCGGGTTGGTTTTCTCCTCCATTGGCTATCAATCGTTGGCTGGAAGTTTGTTTGTACAGGCGTCGATGCAAG CGCCAGGAATCTCGATTGGTGCAGGGCGTTCTGCATTAGATAATTACCCGATCACCTCCTTGGAGATGCTTTCAGTTCTG AGCAACACCCAGGTGTTATTTGCGCATTTGGTTGGTCTGATCTTTTCGCTTTGGTTGTTGCAGAGGATTTATCGCACTGG TTGA
Upstream 100 bases:
>100_bases TCGGGGTGCGTGCCTGCTGAGGGGGGCAGAGAGGAATCAAGGTGGCCGTGCACATGGCGCGCGTAGATGGCAAGTTTGAA CGACCGCCGCAAGAACTTGG
Downstream 100 bases:
>100_bases TTGGCTACGCATGCTGCTGGTAGAGCAGAAAGATCACCACGCCAAAACAGATCGGGTTGGATGGGTGTCAAGGAGGGGGA ATTTGTTTCGATTTGGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MADPLDLQMVSLGLRRMGWIRFWIQTVLGVVVVGVLLFNNIGSSLARNSERALGLGPGLSLTSLAFLFLLYSLWQGWLIV RLGRALNSAVRPSRGETSRLLKRGVIVDLLGLVFSSIGYQSLAGSLFVQASMQAPGISIGAGRSALDNYPITSLEMLSVL SNTQVLFAHLVGLIFSLWLLQRIYRTG
Sequences:
>Translated_187_residues MADPLDLQMVSLGLRRMGWIRFWIQTVLGVVVVGVLLFNNIGSSLARNSERALGLGPGLSLTSLAFLFLLYSLWQGWLIV RLGRALNSAVRPSRGETSRLLKRGVIVDLLGLVFSSIGYQSLAGSLFVQASMQAPGISIGAGRSALDNYPITSLEMLSVL SNTQVLFAHLVGLIFSLWLLQRIYRTG >Mature_186_residues ADPLDLQMVSLGLRRMGWIRFWIQTVLGVVVVGVLLFNNIGSSLARNSERALGLGPGLSLTSLAFLFLLYSLWQGWLIVR LGRALNSAVRPSRGETSRLLKRGVIVDLLGLVFSSIGYQSLAGSLFVQASMQAPGISIGAGRSALDNYPITSLEMLSVLS NTQVLFAHLVGLIFSLWLLQRIYRTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20377; Mature: 20246
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPLDLQMVSLGLRRMGWIRFWIQTVLGVVVVGVLLFNNIGSSLARNSERALGLGPGLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LTSLAFLFLLYSLWQGWLIVRLGRALNSAVRPSRGETSRLLKRGVIVDLLGLVFSSIGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHH SLAGSLFVQASMQAPGISIGAGRSALDNYPITSLEMLSVLSNTQVLFAHLVGLIFSLWLL HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH QRIYRTG HHHHHCC >Mature Secondary Structure ADPLDLQMVSLGLRRMGWIRFWIQTVLGVVVVGVLLFNNIGSSLARNSERALGLGPGLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH LTSLAFLFLLYSLWQGWLIVRLGRALNSAVRPSRGETSRLLKRGVIVDLLGLVFSSIGYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHH SLAGSLFVQASMQAPGISIGAGRSALDNYPITSLEMLSVLSNTQVLFAHLVGLIFSLWLL HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHH QRIYRTG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA