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The map label for this gene is ydbA [C]

Identifier: 124023627

GI number: 124023627

Start: 1695646

End: 1697727

Strand: Reverse

Name: ydbA [C]

Synonym: P9303_19271

Alternate gene names: 124023627

Gene position: 1697727-1695646 (Counterclockwise)

Preceding gene: 124023628

Following gene: 124023625

Centisome position: 63.28

GC content: 44.57

Gene sequence:

>2082_bases
ATGGGAAAGCAGGTCTCTCCAAATCCCAATTACACAGGACCTATAGAGCCGGCAGATGGTGATTATAACTCTGTCAGTTA
TCAAAACTATGGCACGCTGCTGATCAACAACGGCATCTCATTTTCCAACGACGGCGTGCTTTGGAACTACGGAGGAAAGG
TAAACAACAATGGCGATTGGCTTAATAACGGTACACTGAATAATGGCGGTGCACTGACCAATAACTACACGCTTTACAAT
CACATCGGAGGAACACTTTATAACTACGATAACGGCACTCTGATCAATGCCGGCACATTGAATAACGAAGGCACGCTGAA
CAACAAAAGCACTTTAAACTTTAGTCAAGGTTCCAAATTTGTTAACGCGAATGGCACTCTGAACAATAGCGGTACGATCA
ACTCCTACATTGAAGATCTATATTTTGGAGCTGGCGGAACTATCAACTTCCAAAGAGGAAGCAACTTCGTTAATTACTCT
ACAATTACTACTAAGGCTGGTGTCACGCTAACCAACGATAATACACTTACCAACAATGTCACACTTAACAACAATAGTGG
TGGCACGCTGAACAACGAAGGCACGCTGAGTAATGCAGGGACACTGAGCAACGGAGGTACGCTTAACAACGGCGGCAAGT
TAAACAATGAAGGCACGTTGAATAATGAAGGGACGTTGAATAATGAAGGGACTCTCACCTTGATCAACAGGCTCTCGCCT
ATAGTAACAATTAGTTCCAAGTTTGTTAACACGAATGGTACTCTGAATAATAGCGGCACGATCAACTCCTACATTGAAGA
TCTATATTTTGGAGCTGGCGGAACTATCAACTTCCAAAGAGGAAGCAACTTCGTTAATTACGCGACAATTACTACTAAGG
CTGGTGTCACACTAACCAACGATAATACACTTACCAACAATGACACACTTAACAACAACAGTGGCGGCTCGCTGAACAAC
AATGGCATCCTGAACAACAATAAACGCGGCACACTGAACAACGACGGTACGTTGAATAATGGCGGCATGCTGAAGAATGT
CGCCATGCTGAATAACAACAGCGGTAGCATCCTGAACAACAACAACGGCGGCACACTGAACAACGGCGGCACACTGACCA
ATGGCGGCATGCTGAATAACAACAGCGGCAGCTTTCTGAATAATAACGGCATTATTGACAATTCAACTAATCGACTAGGT
GCAAAGGGTTTTATCAATAACGGAGTCTATATAGGCACTGGACAAATTAAAGGTAGTTGGACAGACCATGGAACTGTCAA
GCCTGGCAACTCTGCAGGCGGAGTGCTCGTTGATGGCAACTACTACAAGAAAGGTGGCTCGAAAGAAATAGAACTAGGCG
GCACTTATCACGGCGATGGCGATCGCACCGCAACAGAACACGACTGGATTGAAATTACTGGCAACCTAGAACTCGCAGGA
AAACTCGATGTCTCACTGATTGATGGCTTTAAGCTTTCTGCTGGCGATTCATTTGTGATTACAAAGGTCGATGGAGATCT
CTCTGGGCAATATGATGGCCTTGATGAAGGAGATTCAGTAGGCAGATTTAAAAGCGATAAAGGAGCACCATGTGATCTCT
TTATTACCTATCAAGGAGGAGATGGTAATGACATTGAGCTGTATACGAAATCACTCTTTGGTGACCTTCCTAAGGGCTTG
CGTGAACCAAGAATCATTGGTTCTGCTGAAAATGATTTATTGTCTGGAACCTCTGCAAACGAAGTGATCTTTGGTGCTAA
TGGTGACGATATTTTGTTAGGGCGCAGTGGAGATGATCACGTCACTGGAGGAAATGGTAATGATCGGCTTGATGGCGGGT
CTGGAGATGACAAACTCAAAGGAGATCGTGGTGCTGATACCTACACCCTGAGTCGTGGTGATGATGTGATTATCGGCTTT
TCATTCGCTGAAAACGATCGCATCTCTGTTGGCGATGGAGTTGAGCTTTCCTTGACGCAAGTCGGAGATGATTTATTGCT
CACAGCAGATGGCATACACACCACATTGCTGGATGTGGATAAGGTTGAATTCTTTGTGGCTGATGTTGTTGACTTTATCT
GA

Upstream 100 bases:

>100_bases
AAAAATACAGAAAATGTAAATTAAATATAAATAGATTCTTAAATAGAGAGCTGATGGTGGATAAAGAGCCGACGATAAAT
TTCGTTATTAGTTTGAATTT

Downstream 100 bases:

>100_bases
GAGGTAGAAACCGTTGTTATGCCATCACGGTTCAAACGATGCCTTGATGGCTCTGGCTGAGCGCTTGATCTGCTGACAAG
CTGGGCGCATCATCTCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 692

Protein sequence:

>693_residues
MGKQVSPNPNYTGPIEPADGDYNSVSYQNYGTLLINNGISFSNDGVLWNYGGKVNNNGDWLNNGTLNNGGALTNNYTLYN
HIGGTLYNYDNGTLINAGTLNNEGTLNNKSTLNFSQGSKFVNANGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYS
TITTKAGVTLTNDNTLTNNVTLNNNSGGTLNNEGTLSNAGTLSNGGTLNNGGKLNNEGTLNNEGTLNNEGTLTLINRLSP
IVTISSKFVNTNGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYATITTKAGVTLTNDNTLTNNDTLNNNSGGSLNN
NGILNNNKRGTLNNDGTLNNGGMLKNVAMLNNNSGSILNNNNGGTLNNGGTLTNGGMLNNNSGSFLNNNGIIDNSTNRLG
AKGFINNGVYIGTGQIKGSWTDHGTVKPGNSAGGVLVDGNYYKKGGSKEIELGGTYHGDGDRTATEHDWIEITGNLELAG
KLDVSLIDGFKLSAGDSFVITKVDGDLSGQYDGLDEGDSVGRFKSDKGAPCDLFITYQGGDGNDIELYTKSLFGDLPKGL
REPRIIGSAENDLLSGTSANEVIFGANGDDILLGRSGDDHVTGGNGNDRLDGGSGDDKLKGDRGADTYTLSRGDDVIIGF
SFAENDRISVGDGVELSLTQVGDDLLLTADGIHTTLLDVDKVEFFVADVVDFI

Sequences:

>Translated_693_residues
MGKQVSPNPNYTGPIEPADGDYNSVSYQNYGTLLINNGISFSNDGVLWNYGGKVNNNGDWLNNGTLNNGGALTNNYTLYN
HIGGTLYNYDNGTLINAGTLNNEGTLNNKSTLNFSQGSKFVNANGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYS
TITTKAGVTLTNDNTLTNNVTLNNNSGGTLNNEGTLSNAGTLSNGGTLNNGGKLNNEGTLNNEGTLNNEGTLTLINRLSP
IVTISSKFVNTNGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYATITTKAGVTLTNDNTLTNNDTLNNNSGGSLNN
NGILNNNKRGTLNNDGTLNNGGMLKNVAMLNNNSGSILNNNNGGTLNNGGTLTNGGMLNNNSGSFLNNNGIIDNSTNRLG
AKGFINNGVYIGTGQIKGSWTDHGTVKPGNSAGGVLVDGNYYKKGGSKEIELGGTYHGDGDRTATEHDWIEITGNLELAG
KLDVSLIDGFKLSAGDSFVITKVDGDLSGQYDGLDEGDSVGRFKSDKGAPCDLFITYQGGDGNDIELYTKSLFGDLPKGL
REPRIIGSAENDLLSGTSANEVIFGANGDDILLGRSGDDHVTGGNGNDRLDGGSGDDKLKGDRGADTYTLSRGDDVIIGF
SFAENDRISVGDGVELSLTQVGDDLLLTADGIHTTLLDVDKVEFFVADVVDFI
>Mature_692_residues
GKQVSPNPNYTGPIEPADGDYNSVSYQNYGTLLINNGISFSNDGVLWNYGGKVNNNGDWLNNGTLNNGGALTNNYTLYNH
IGGTLYNYDNGTLINAGTLNNEGTLNNKSTLNFSQGSKFVNANGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYST
ITTKAGVTLTNDNTLTNNVTLNNNSGGTLNNEGTLSNAGTLSNGGTLNNGGKLNNEGTLNNEGTLNNEGTLTLINRLSPI
VTISSKFVNTNGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYATITTKAGVTLTNDNTLTNNDTLNNNSGGSLNNN
GILNNNKRGTLNNDGTLNNGGMLKNVAMLNNNSGSILNNNNGGTLNNGGTLTNGGMLNNNSGSFLNNNGIIDNSTNRLGA
KGFINNGVYIGTGQIKGSWTDHGTVKPGNSAGGVLVDGNYYKKGGSKEIELGGTYHGDGDRTATEHDWIEITGNLELAGK
LDVSLIDGFKLSAGDSFVITKVDGDLSGQYDGLDEGDSVGRFKSDKGAPCDLFITYQGGDGNDIELYTKSLFGDLPKGLR
EPRIIGSAENDLLSGTSANEVIFGANGDDILLGRSGDDHVTGGNGNDRLDGGSGDDKLKGDRGADTYTLSRGDDVIIGFS
FAENDRISVGDGVELSLTQVGDDLLLTADGIHTTLLDVDKVEFFVADVVDFI

Specific function: Unknown

COG id: COG2931

COG function: function code Q; RTX toxins and related Ca2+-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72684; Mature: 72552

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKQVSPNPNYTGPIEPADGDYNSVSYQNYGTLLINNGISFSNDGVLWNYGGKVNNNGDW
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEECCCEECCCCCC
LNNGTLNNGGALTNNYTLYNHIGGTLYNYDNGTLINAGTLNNEGTLNNKSTLNFSQGSKF
CCCCCCCCCCEEECCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCEE
VNANGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYSTITTKAGVTLTNDNTLTNNV
EECCCEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCEEEECCCEEEEEE
TLNNNSGGTLNNEGTLSNAGTLSNGGTLNNGGKLNNEGTLNNEGTLNNEGTLTLINRLSP
EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEECCCC
IVTISSKFVNTNGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYATITTKAGVTLTN
EEEEEEEEEECCCEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCEEEEC
DNTLTNNDTLNNNSGGSLNNNGILNNNKRGTLNNDGTLNNGGMLKNVAMLNNNSGSILNN
CCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCEEEEEEEEECCCCCEEEC
NNGGTLNNGGTLTNGGMLNNNSGSFLNNNGIIDNSTNRLGAKGFINNGVYIGTGQIKGSW
CCCCEECCCCEEECCCEEECCCCCEEECCCEEECCCCCCCCCEEECCCEEEECCEEECCC
TDHGTVKPGNSAGGVLVDGNYYKKGGSKEIELGGTYHGDGDRTATEHDWIEITGNLELAG
CCCCCCCCCCCCCCEEECCCEEECCCCCEEEECCEEECCCCCCCCCCCEEEEECCEEEEE
KLDVSLIDGFKLSAGDSFVITKVDGDLSGQYDGLDEGDSVGRFKSDKGAPCDLFITYQGG
EEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
DGNDIELYTKSLFGDLPKGLREPRIIGSAENDLLSGTSANEVIFGANGDDILLGRSGDDH
CCCEEEEEEHHHHHHHHHHHCCCEEECCCCCCEECCCCCCEEEEECCCCEEEEECCCCCC
VTGGNGNDRLDGGSGDDKLKGDRGADTYTLSRGDDVIIGFSFAENDRISVGDGVELSLTQ
EECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEECCCCEEEEEE
VGDDLLLTADGIHTTLLDVDKVEFFVADVVDFI
CCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHC
>Mature Secondary Structure 
GKQVSPNPNYTGPIEPADGDYNSVSYQNYGTLLINNGISFSNDGVLWNYGGKVNNNGDW
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCEEEECCCEECCCCCC
LNNGTLNNGGALTNNYTLYNHIGGTLYNYDNGTLINAGTLNNEGTLNNKSTLNFSQGSKF
CCCCCCCCCCEEECCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCEEECCCCCEE
VNANGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYSTITTKAGVTLTNDNTLTNNV
EECCCEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCEEEECCCEEEEEE
TLNNNSGGTLNNEGTLSNAGTLSNGGTLNNGGKLNNEGTLNNEGTLNNEGTLTLINRLSP
EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEECCCC
IVTISSKFVNTNGTLNNSGTINSYIEDLYFGAGGTINFQRGSNFVNYATITTKAGVTLTN
EEEEEEEEEECCCEECCCCCHHHHHHHHHCCCCCEEEECCCCCEEEEEEEEEECCEEEEC
DNTLTNNDTLNNNSGGSLNNNGILNNNKRGTLNNDGTLNNGGMLKNVAMLNNNSGSILNN
CCEECCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCEECCCCEEEEEEEEECCCCCEEEC
NNGGTLNNGGTLTNGGMLNNNSGSFLNNNGIIDNSTNRLGAKGFINNGVYIGTGQIKGSW
CCCCEECCCCEEECCCEEECCCCCEEECCCEEECCCCCCCCCEEECCCEEEECCEEECCC
TDHGTVKPGNSAGGVLVDGNYYKKGGSKEIELGGTYHGDGDRTATEHDWIEITGNLELAG
CCCCCCCCCCCCCCEEECCCEEECCCCCEEEECCEEECCCCCCCCCCCEEEEECCEEEEE
KLDVSLIDGFKLSAGDSFVITKVDGDLSGQYDGLDEGDSVGRFKSDKGAPCDLFITYQGG
EEEEEEECCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECC
DGNDIELYTKSLFGDLPKGLREPRIIGSAENDLLSGTSANEVIFGANGDDILLGRSGDDH
CCCEEEEEEHHHHHHHHHHHCCCEEECCCCCCEECCCCCCEEEEECCCCEEEEECCCCCC
VTGGNGNDRLDGGSGDDKLKGDRGADTYTLSRGDDVIIGFSFAENDRISVGDGVELSLTQ
EECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCCEEEECCCCEEEEEE
VGDDLLLTADGIHTTLLDVDKVEFFVADVVDFI
CCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA