| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023625
Identifier: 124023625
GI number: 124023625
Start: 1693029
End: 1695542
Strand: Reverse
Name: 124023625
Synonym: P9303_19251
Alternate gene names: NA
Gene position: 1695542-1693029 (Counterclockwise)
Preceding gene: 124023627
Following gene: 124023624
Centisome position: 63.2
GC content: 56.88
Gene sequence:
>2514_bases ATGGCCCTTTTTGGCGTTTCAGCTTTCAGATCCTTATTGAAGCGTGGATCGAGCTTGAAGCCTTGGAGTGTGCCTGCCGC TAGCTGGAGCCGTGCTTTTGGATTGGCTTGGCAACAGCCATACACGGTGCGTTATGCCAGCAATCTCGATGATGGGCCCT GGCATGGCATGCCCCTGGGAGGTTTCGGTGCCGGTTGTATCGGGCGTAGCCCGCGCGGTGATTTCAATCTCTGGAATCTT GATGCTGGTGAACACTGGCAGGGCAGCATTCCTGATTGCCAGTTCGCTTTGTTTGAGCGGCAGGGGGATCAGGTGCGTGC TCATGCGCTAGCTACAGCGCCACAAACCGATGACTCTCAACCTGAACTAGACAAGCCTCTCTCCTCTTGGAGCTGGTATC CAGCCAGTACAGAGCAACGCACGACTGGTAGCTATTCAGCTCGCTATCCGCTCAGTTGGACCCATTACAAAGGAGTCTTC GCGGCTGAGCTGGTTTGCGAGGCGTTTAGTCCAATCCTTCCTGGTGATTACCGACGCACCAGCTACCCCCTGGCCGTGTT TCGTTGGCAGCTGCAGAACCCCACATCGCAATCTCTGGAATTGTCGTTGCTGCTGAGTTGGCGCAACACATGTGGCTGGT TTACGAACACCGATCCCTCCGCCAGCGTTCATTTCCGCGATGACGGCAGCCCTGAACACAGTTATGTGCCTGCTATCGGC CGTGGCGAGGGCCAGTGCAATCGTTGGATTGATCAACCAGGCCTGATTGGTGTCTTGATGGAGGGTGAGCGAGCTGACCC CTTGGCTGAGGGGCAAGGGCAGTGGTGTTTGGCTGTCCCGGATCATCTGCCTGGTGTGGAGGTGATGCGTTGTAGTCGTT GGGATCCCAGCGGAGATGGCAGCGAACTGTGGAGTTCCTTCGCAAGTGAAGGAACCATTCCAAACAGCAATGACACGCAC AAGAGCTTGGCGGGCGAGCAGACCAGCGCTGCTTTAGCGGTGAAGGTCACCCTGGCGCCTGGTGAAAGTCTTGAGATCCC TGTGGTGATCAGTTGGGATCTACCGGTGACGGCTTTCGCTACAGGCGTTCGCGATTTGCGGCGTTATACCGACTTTCACG GCAGCGATGGTCAGGCCGCCGCCGCTCTGGCGGCCGAGGCCTTGCGTGATTGGCCTGATTGGCGTGAGCAGATTGATGCC TGGCAGGCGCCGGTGTTGGCGCGTGAGGATTTGCCGGAACGCTTGCGAATGGCTTTGTTCAATGAGCTCTACGACTTGGC TAGCGGTGGCAGCCTTTGGACGGCAGCCCGTCCAGGAGATCCGGTGGGGCGCTTTGGGGTTCTTGAGTGCTTCGACTACG CCTGGTACGAAAGTCTTGATGTGCGCCTCTATGGCTCCTTGGCTCTGCTGCAGTTGTGGCCTGAGCTCGATAAGGCTGTT TTGCGTAGTTTTGCTCGAGCCATTCCAGCTGCAGATGCCACGCCACGACCAATCGGCTGGTACTTCACCCAGGGGCGTGG CCGGGTCGAGGCCCCCCGCAAGAGGGCGGCGGCTACCCCCCATGATCTGGGAGCACCGAATGAGTCGCCGTTTGATGCCA CCAACTACACCGCTTATCAGGATTGCAATCTCTGGAAAGATCTGGCCAGTGATTATGTGTTGCAGGTATGGCGAACGTTT CTTCTCTCACCCAATGGCGAAGATCTGAGCTTCTTGGCTGAATGCTGGCCGGCGGCAGTGCAAGCCCTCAGTTATCTCAA GCGCTTTGATGTCAATCACGATGGTCTACCCGATAACGGTGGTGCGCCAGATCAGACCTTTGACGATTGGCCTTTACAAG GCGTGAGCGCCTATTGCGGTGCTCTTTGGATTGCAGCTCTTGAGGCTGCTCTAGCCATGGCACAGCGCTTGCAATTGGAC TTAGGACTCAATACGGCAGAGGAGCAACATCAGTTCAGCGGTTGGCTTGAGCAATCACGGGCCAACTTCGATCGGCTGCT TTGGAATGGGGAGTACTACAAGATTGATGCTGAGAGTGGTACGCCCGTGGTGATGGCTGATCAACTCTGCGGCGATTTTT ATGCTCGCTTGCTGGGGCTGCCCTCTGTTGTTGCTGATGAACGCAGTCGCAGCAGTCTGAATGCAGTCAAAGAGGCCTGC TTTGAAGGCTTTGAAGGCGGCCGTTTGGGAGTTGCCAATGGTTTGTGCCGTGATGGCATGCCACTTGATCCCAAGGGAAC CCATCCCTTGGAGGTATGGACTGGCATCAACTTCGGTCTAGCGGCCTACTACCGACTGATGGGCGATGCAACGACGGCCA CAGCCATCTGTTCAGCGGTGGTCAATCAGGTGTATGGCGGTGGTTTGCAATTCCGCACCCCAGAAGCGATTACTGCAGTG AAGACCTACAGGGCTTGCCACTATTTGCGTGCAATGGCGATCTGGGCCCTGTGGGCAACACATACGGATTGGCAGTTGAT TCCAGGTGCCGAACGGGCAGGGTCTGAGGGGTGA
Upstream 100 bases:
>100_bases GTAGAAACCGTTGTTATGCCATCACGGTTCAAACGATGCCTTGATGGCTCTGGCTGAGCGCTTGATCTGCTGACAAGCTG GGCGCATCATCTCTTGCCCC
Downstream 100 bases:
>100_bases ATGAGTGACGCCAATCTGTGCGGGATGTCCTATCGGCAGCGATGGTTTTTTGCATACGCTGTGAAGACCTTCTTTGAGGT CATGGCCAGCGCAGGGAGTT
Product: bile acid beta-glucosidase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 837; Mature: 836
Protein sequence:
>837_residues MALFGVSAFRSLLKRGSSLKPWSVPAASWSRAFGLAWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNL DAGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRTTGSYSARYPLSWTHYKGVF AAELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNDTH KSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALRDWPDWREQIDA WQAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTF LLSPNGEDLSFLAECWPAAVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLD LGLNTAEEQHQFSGWLEQSRANFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAV KTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEG
Sequences:
>Translated_837_residues MALFGVSAFRSLLKRGSSLKPWSVPAASWSRAFGLAWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNL DAGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRTTGSYSARYPLSWTHYKGVF AAELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNDTH KSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALRDWPDWREQIDA WQAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTF LLSPNGEDLSFLAECWPAAVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLD LGLNTAEEQHQFSGWLEQSRANFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAV KTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEG >Mature_836_residues ALFGVSAFRSLLKRGSSLKPWSVPAASWSRAFGLAWQQPYTVRYASNLDDGPWHGMPLGGFGAGCIGRSPRGDFNLWNLD AGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQPELDKPLSSWSWYPASTEQRTTGSYSARYPLSWTHYKGVFA AELVCEAFSPILPGDYRRTSYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIGR GEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDGSELWSSFASEGTIPNSNDTHK SLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFATGVRDLRRYTDFHGSDGQAAAALAAEALRDWPDWREQIDAW QAPVLAREDLPERLRMALFNELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAVL RSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQDCNLWKDLASDYVLQVWRTFL LSPNGEDLSFLAECWPAAVQALSYLKRFDVNHDGLPDNGGAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDL GLNTAEEQHQFSGWLEQSRANFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEACF EGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAVVNQVYGGGLQFRTPEAITAVK TYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEG
Specific function: Unknown
COG id: COG4354
COG function: function code G; Predicted bile acid beta-glucosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24308251, Length=549, Percent_Identity=34.7905282331512, Blast_Score=294, Evalue=2e-79, Organism=Caenorhabditis elegans, GI71992731, Length=803, Percent_Identity=31.5068493150685, Blast_Score=326, Evalue=3e-89, Organism=Caenorhabditis elegans, GI71992715, Length=803, Percent_Identity=31.5068493150685, Blast_Score=326, Evalue=3e-89, Organism=Caenorhabditis elegans, GI71992723, Length=803, Percent_Identity=31.5068493150685, Blast_Score=325, Evalue=5e-89, Organism=Caenorhabditis elegans, GI17562976, Length=800, Percent_Identity=26.25, Blast_Score=253, Evalue=3e-67, Organism=Drosophila melanogaster, GI45552032, Length=464, Percent_Identity=31.0344827586207, Blast_Score=221, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92198; Mature: 92066
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFGVSAFRSLLKRGSSLKPWSVPAASWSRAFGLAWQQPYTVRYASNLDDGPWHGMPLG CCEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC GFGAGCIGRSPRGDFNLWNLDAGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHHEECCCCCCCCC PELDKPLSSWSWYPASTEQRTTGSYSARYPLSWTHYKGVFAAELVCEAFSPILPGDYRRT CCHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCC SYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG CCCEEEEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDG CCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCH SELWSSFASEGTIPNSNDTHKSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFA HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH TGVRDLRRYTDFHGSDGQAAAALAAEALRDWPDWREQIDAWQAPVLAREDLPERLRMALF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHH NELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV HHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQ HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC DCNLWKDLASDYVLQVWRTFLLSPNGEDLSFLAECWPAAVQALSYLKRFDVNHDGLPDNG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDLGLNTAEEQHQFSGWLEQSR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ANFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC CCHHHHEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAV HCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH VNQVYGGGLQFRTPEAITAVKTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEG HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCC >Mature Secondary Structure ALFGVSAFRSLLKRGSSLKPWSVPAASWSRAFGLAWQQPYTVRYASNLDDGPWHGMPLG CEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCC GFGAGCIGRSPRGDFNLWNLDAGEHWQGSIPDCQFALFERQGDQVRAHALATAPQTDDSQ CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEHHHEECCCCCCCCC PELDKPLSSWSWYPASTEQRTTGSYSARYPLSWTHYKGVFAAELVCEAFSPILPGDYRRT CCHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCC SYPLAVFRWQLQNPTSQSLELSLLLSWRNTCGWFTNTDPSASVHFRDDGSPEHSYVPAIG CCCEEEEEEECCCCCCCCEEEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC RGEGQCNRWIDQPGLIGVLMEGERADPLAEGQGQWCLAVPDHLPGVEVMRCSRWDPSGDG CCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHEECCCCCCCCH SELWSSFASEGTIPNSNDTHKSLAGEQTSAALAVKVTLAPGESLEIPVVISWDLPVTAFA HHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHH TGVRDLRRYTDFHGSDGQAAAALAAEALRDWPDWREQIDAWQAPVLAREDLPERLRMALF HHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHH NELYDLASGGSLWTAARPGDPVGRFGVLECFDYAWYESLDVRLYGSLALLQLWPELDKAV HHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHH LRSFARAIPAADATPRPIGWYFTQGRGRVEAPRKRAAATPHDLGAPNESPFDATNYTAYQ HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC DCNLWKDLASDYVLQVWRTFLLSPNGEDLSFLAECWPAAVQALSYLKRFDVNHDGLPDNG CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GAPDQTFDDWPLQGVSAYCGALWIAALEAALAMAQRLQLDLGLNTAEEQHQFSGWLEQSR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ANFDRLLWNGEYYKIDAESGTPVVMADQLCGDFYARLLGLPSVVADERSRSSLNAVKEAC CCHHHHEECCEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHH FEGFEGGRLGVANGLCRDGMPLDPKGTHPLEVWTGINFGLAAYYRLMGDATTATAICSAV HCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHH VNQVYGGGLQFRTPEAITAVKTYRACHYLRAMAIWALWATHTDWQLIPGAERAGSEG HHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA